BGIOSGA012337

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Revision as of 09:45, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012337| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012337, complete gene.| tag = UXS-3| ...")
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Gene Name

BGIOSGA012337

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012337, complete gene.

LocusTag

UXS-3

Ensembl Transcript ID

BGIOSGA012337-TA

Ensembl Protein ID

BGIOSGA012337-PA

Length

6238

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:10162875..10169112

Sequence Coding Region

10162875..10163081,10165968..10166075,10166174..10166260,10166930..10167017,10167571..10167662
,10167768..10167832,10167920..10168008,10168102..10168179,10168267..10168360
,10168445..10168511,10168607..10168670,10168796..10168836,10168921..10169112

Genome Context

<gbrowseImage1> name=IndicaChromosome03:10162875..10169112 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:10162875..10169112 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCACTGTGTTGTCCTAGTGCTTGTCCTCGTCATCGCTTCCTCCCTTGTTGCGGCGGCGTACGGGGCGGCCTTGCGTTCGCTCAGCGCCAACGAAGGCAAGGGAGAGGTCAACACCGACACCGCCGTCGACCTCATCACCACCGGCCGAACCTCAACACTGACGCAGGGTGGTCTCGCCAGAGCCGTGGCCATCATTAGGTTGGTGCTCAACGGTATGGCCCAGAAGGAGCCCAATGCCACCAGCACCGGGGAGCACACCACCCGCCCGCCGCCGACGCCCTCGCCGCTCCGGTTCTCCAAGTTCTTCCAGGCGAACCTGAGGATCCTCGTCACCGGCGGAGCTGGCTTCATCGGCTCGCACCTCGTCGACAAGCTCATGGAGAACGAGAAGCACGAGGTCATTGTCGCAGACAACTTTTTCACTGGTTCAAAAGACAACCTGAAGAAGTGGATCGGACACCCAAGATTTGAGCTAATCCGTCATGATGTCACCCAGCCCCTGCTTGTGGAGGTTGACCAAATCTATCACCTTGCTTGCCCTGCTTCACCAATCTTCTACAAGCACAACCCTGTCAAGACCATCAAGACAAACGTTATCGGAACCCTGAACATGCTTGGACTTGCCAAGAGAGTTGGAGCTAGGATTTTGTTGACTTCGACCTCTGAAGTTTACGGTGATCCGCTTGAGCACCCTCAAACAGAGGCCTACTGGGGAAATGTTAACCCAATTGGAGTCAGGAGTTGCTATGACGAGGGTAAGCGTGTCGCAGAAACACTGATGTTTGACTATCACAGGCAGCATGGCATTGAGATCCGAATTGCCAGGATTTTCAACACCTATGGACCTAGGATGAACATTGATGATGGGCGTGTTGTTAGTAACTTCATTGCTCAGGCCGTACGTGGCGAGCCCCTGACTGTTCAGAAGCCAGGAACACAAACTAGGAGCTTCTGCTATGTTGCTGACATGGTTAATGGTCTTATTAAGCTGATGAACGGGGACAACACTGGACCAATTAATTTGGGAAACCCAGGTGAATTCACCATGCTGGAACTTGCTGAGAATGTGAAGGAGTTGATCAACCCAGAGGTTACCGTCACAATGACTGAGAACACTCCTGATGATCCTCGTCAGAGGAAGCCAGACATTACAAAGGCAAAGGAAGTTTTGGGGTGGGAGCCCAAGATCGTTCTGCGTGATGGCTTGGTGCTCATGGAAGATGATTTCCGGGAGCGCCTCCAAGTGCCCAAGAAGAACCAGGCCTAA</cdnaseq>

Protein Sequence

<aaseq>MAHCVVLVLVLVIASSLVAAAYGAALRSLSANEGKGEVNTDTAVDLITTGRTSTLTQGGLARAVAIIRLVLNGMAQKEPNATSTGEHTTRPPPTPSPLRFSKFFQANLRILVTGGAGFIGSHLVDKLMENEKHEVIVADNFFTGSKDNLKKWIGHPRFELIRHDVTQPLLVEVDQIYHLACPASPIFYKHNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQTEAYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAVRGEPLTVQKPGTQTRSFCYVADMVNGLIKLMNGDNTGPINLGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLGWEPKIVLRDGLVLMEDDFRERLQVPKKNQA</aaseq>

Gene Sequence

<dnaseqindica>1..207#3094..3201#3300..3386#4056..4143#4697..4788#4894..4958#5046..5134#5228..5305#5393..5486#5571..5637#5733..5796#5922..5962#6047..6238#ATGGCGCACTGTGTTGTCCTAGTGCTTGTCCTCGTCATCGCTTCCTCCCTTGTTGCGGCGGCGTACGGGGCGGCCTTGCGTTCGCTCAGCGCCAACGAAGGCAAGGGAGAGGTCAACACCGACACCGCCGTCGACCTCATCACCACCGGCCGAACCTCAACACTGACGCAGGGTGGTCTCGCCAGAGCCGTGGCCATCATTAGGTTGGTCTCACCTTTGTCTCCTTTTTTTTTAATCCCTGCGAAGTCCGCCTTCGATGCCCCAATGCCACGATTGACGTTGCCGCGCCGCTGGCTGATTTCGTCGCTAAGATTTGGAGAAGGAGGCTGTGACGGCCGGAGGAGGAAAAGGAGAGGGGAGGGGCTGACGGGTAGGGTCCTCATTGATTTCCACACGGGCACACCACGATGACATGTCACGTAGACAAGAGTGACAAATAGTTAACAAATCATCTATCTCCAGTGGTAAATTATTAAGCGTGAATCTAAAAGGGGTATTTGGATAATTGCTAAATCTAAAAGTAGTAAATAGTTAAATTCCCCAGATTAGATTGGGGATGCGTGAAGTTCAGGCGAGCAAGGCATGTAAACACTGACGCAAATCGCAATCACGCAATACATCACTACAGCAGCAGCGGATCAAGATCAACAACTCCATTTCCCAAAATTTAATCCATAATGAAAGACATACACTGATATACAAGAGCCTAAACATTTACTAATCATCAACAAAGGATAGCTAGGAATTAATTAAATAATACAGCTACGCCAACAGTGCGTACGTCAGCACCATTCACCCCACGCTTTTTTAGCGCAATGTGTAACCACCCAGCGGCATTGTCAGAAAAAGTTGAGGGCTTTTTTGGTGCAGCCTTGGAGTGTTGGACTAACTTCTTGATAAGAGTCTGTTTAGTTCGCGAACGAAAACTTTTAGCGTGTTATATAGATATTAATTTAAAGTATTAAATATAGACTAATAACAAAAACAAATTATAAATTTTGCCTGAAAACTACGTGACAAATTTATTAAGTCTAGTTAATCTGTCATTAGCAAATATTTACTGTAGCACTATATTGTTAAATCATGGAGCAGTTAGGTTTAAAATATCCGTATCGCAATCTACACGTAATCTGTGTAATTAGTTTTTTTTATATATTTAATACTTCATGCACGTGTCTAAAAATTCGATATGATATGGTGAAAAATTATTGTTTAGAAACTAAACAGGCTCTAAATTATAAGCACCGCGATATTATCAGAGGTTTGATGATGAAGTCTCAACGTGCCTGCGAGTCTCATTGCCCCCCAACTCCCCCGCCCACGAAATGATTCCCCTGCTCGCCGGCGTATGTCGCAAGCAACACAGCGATCCAACAACGAGCCTCGCGCCCTCGCGGCTCCACCACCTGCGCACCGCCGCATCTGCGTTTTCTCCGTGCTCCGAACCCGACATCCTTCGCCACCGGGTCCGACCGGCCGGCCCGTACCCAAAAAGTCAATTTTCCCGGGCCCCACATGTCAGTGAGGTACCAGCCCATCCCCCGGTCCTAAACAACTTAACCACCGGTGAACAACTGAGCACCGATGCCCCACCTCGCAGAGATAATTATAAAGTATTAGGGCCTCTTTGAATCGCAGGATTGAGAAAACGTAGGAATAAGAAAAACGTAGGATTTTAATATGAATGTAAGTTTAAAACAGAGGATTGCAAAACACAGAAAAAACATAGGAATGACCGTTTGATTGAACGGTGAGAGAGAGACTTAAAGGAAAGTTAGCAAGAGGTTGAAGCTCTTGCTAAAGGCCTCTTTGAATCGCAGGATAGAAAAAAACGGAGGAATAAGAAAAACGCAGGATTCTGACAAGAATTGAAGTGTAAAACAGATGATTGCAAAACATAGGAAAAACACATGAATGGTCGTTTGATTGGAGCGCAGGAAAAACGCAGGAATCGGATGAGAGAGATAGACTTAAAGGAAATTTTCCAAGAGGTTGGAGCTCTTGCTAAATTTCCTCCAAAATCCACATGCAATGTGTCATTCCATACGAATTTCATAAGATTTGGAAAGCTTCAATCCTTTGAATCAAAGGGTCAAATAGGAAAATTTTCTATAGGATTTGAATCCAATGAAATTCCTACATAAATCCTTTGATTTAAAGGGGCCCTAAATTTTCTTCAAAATCTCTATAGAATTGTCCATTCCATATGAATTTCAAAGAATTGGATAGGATTCAATCCTTTATTTCAAAAGGCTTTATAAGAAATTTTTCTATATGACTGAAATCCTCTAAAATTCCTGTGTTTTCCTCCAAATCTAAGGAGCCCTTAACCGGGGAAATCGCTACCTAATCTGGCCTAACCGAGGTAATTATCGAGTGGGATTAACCTTCGTTCGGGGCGGTGCTCGGGTCGGGCGTCCAGATCTCGGGCTCGCTGAGCTGTCGCCATCGACCCGGAGTCCCTCCCGCACCAGCTAACCTTTGCTTCCGTAGGAAGCGCCAGCCAGCGCTCGCCGTTGTCACCTGTCACACTGCGTTGCACGGATTATCGTTTTTAATTAATCGTCACCGGATTGTTTTTTTTCTTTCTTTTTGCAAATCTCGCTTCGCTTTTGGAGTGGGAGGAATTAATTGTGGAGTTGGGTAGATCGATCAGGGGCAGCGCGAGCGAGGCCCGGTTGGTAGCAGTCGGTGCGTGTGTTTGTGCGTGTGCGCGCTGCTTCTGCTTGCATCGTGGTGCGAGGAGGGGAGAGGAGGGGTGCTGCTATAAATACGGCTCAGATCTGGGAGGCTTTCTTCCTCGTCCGCCTCCGGTCTAATCCGATTCAAACCCGCCGTTTCCAAGCTTGCTCTCCTCTCCCCCCCAATCCTTCCCTCCCGAGTGGCAGGGTGAGCATTCCGCCGCTCCCGTGTTTTTTTTTTTGATCCATCTCCGTGGTGGTGGATCGCGATCGCGTGTGTGGGGTTGAGGGGGGTTTCGATTTTGTGGTTTGGGTGGTGTTGGTTTTTTTTTTTTTTGGGGGGGGCGGGGGGATTTGTGACCAATTCTGAGTGTTGTGACCGTTGGATCTGTGGCGTTTTTGTGCGTACCAGGTGCTCAACGGTATGGCCCAGAAGGAGCCCAATGCCACCAGCACCGGGGAGCACACCACCCGCCCGCCGCCGACGCCCTCGCCGCTCCGGTTCTCCAAGTTCTTCCAGGTGATTTTGCCTGGATCCGATCGCTGGATCTCGCCGTATACGTGGCCCGATCGCTCGACCTGGTCTGATTGTTCGTGGGTGTTTGTGTGTGTGTGCAGGCGAACCTGAGGATCCTCGTCACCGGCGGAGCTGGCTTCATCGGCTCGCACCTCGTCGACAAGCTCATGGAGAACGAGAAGCACGAGGTACGGATGAGATCCTGTAGTACGATCCGTTTCATTTTTGTTCGGCTTGCTTGTCTATTGGGGGGTTTGTGGCATTGACTTGTGCCGGTCGGTGAGGTCAAGCTCCGTCCGTTGTGAGGAACAGTAGCTAGATCTGAGTGATCTAGTTAGGGACTGAGGGTTCGAGATCTATATCAGAAACGGTAATGAATGGAGATGCTTCTGCCAGATCTCTGGGGTGCAAGCTTTTCTGCTACGTTTTGCATGGCGTGGGTTTGGGGCATTTATGTCTGAAACTTAAGCTTGAAGCTTCTCTCGAGTCTCACTACCTGAGAATGTTTTCCACAACGAGAGAGATCGTAGATATCAGTGTCAATGCTTCAGGGATCTTGCTAGGAGTACTTCATTATATGCCCTGAGCTTTAGCTTTGGATCTGTTTGAGAATGTGAGAGTTAATGCAAGATCCAGTAGCAATGTTGTAGAGATCTCGCTGCTAGTACTTCATCCATGATAAGCAGAGTACCATGCTAAGGCTTGAGATCTTTCTTGCGCAGTGCATATGCTTCATATTCACAAGAGTTTGTACTTTGTAGAACTCAACAATGTTGCATTGTTGCCTTGTGTGACTGCTTGGCAGATTTTTAGCTGAGAAAGTGCGGGCCTTTGATCATGTGTTCTTTTCTGTTCAGGTCATTGTCGCAGACAACTTTTTCACTGGTTCAAAAGACAACCTGAAGAAGTGGATCGGACACCCAAGATTTGAGCTAATCCGTCATGGTATTGCTACATTCTCAGTGCATTTAGTTCATGAACTATTGTTACATACTAGTAATAAAGTTTTACTGCTAGCAAGTTTTTTCGTTCAAAATTTGAGAAACACTATAGATCTTGGTTAGTAAATTACAAACAAAGCACCGTATTATAATTTTGGCTTTGAGTCAATGCTTACACAAATGCAGTCTTGAGTTGTCTGTTCAACAGAATGTACGGAATTTCTGCACTTGTCATTGAACCTCTCTTAGTCAAGTTCATCTTTCTATCTTATTAGATTAGATTATGAGTATGTTTATGTGACTTTCTATTGGTAAATTCTGTTCCAACTTCCAAACAAAAGTGTATGCTTTCATGCTTATATAGTTATATTTATGACTTATGAAAAAGGGTGTTTGGCCCAACCATGAAAACAGGCTGATAGATGTTATCCTGTGCTCATCTTGATTCTGTAGTGTACTTAAGACACTAAACTTTTTTTGCGATCAGTTCTATCGTATCTTCAAAAGTATATTATTGTGAGATATTAAAATTTTGACCTTTTTTTTATTCATTTCAGATGTCACCCAGCCCCTGCTTGTGGAGGTTGACCAAATCTATCACCTTGCTTGCCCTGCTTCACCAATCTTCTACAAGCACAACCCTGTCAAGGTACAGTCTCTATTATATATATAACTCTGTTAAGTCCAACTATTCAAATACAAATCTTGTTCATGTCCTGTTCTGATATTTAAATGGATGTATAATCATGTACAGACCATCAAGACAAACGTTATCGGAACCCTGAACATGCTTGGACTTGCCAAGAGAGTTGGAGCTAGGTTGGTGTTTTTTTAATGCTGATTAACTTGTCCTATGCAACTTATGAGAACTATATAATGAAGGGAGGTTTTTATGTTGTACTGCAGGATTTTGTTGACTTCGACCTCTGAAGTTTACGGTGATCCGCTTGAGCACCCTCAAACAGAGGCCTACTGGGGAAATGTTAACCCAATTGGTACGTCTGTTCTATCACAAATACACTACATTTATCCTATATTTTCTTAATCTAGTGCAAAGTTCACTTACTTGAATTGATTTACTTCATCAGGAGTCAGGAGTTGCTATGACGAGGGTAAGCGTGTCGCAGAAACACTGATGTTTGACTATCACAGGCAGCATGGCATTGGTAATATTTTTAGTTCATACCTTTTTGTCTTGTGATGTACTGGATTGTAGTTCTCCTTAATAAGTATTTTCCAATCTATCTCTGTAGAGATCCGAATTGCCAGGATTTTCAACACCTATGGACCTAGGATGAACATTGATGATGGGCGTGTTGTTAGTAACTTCATTGCTCAGGCCGTACGGTAATGCTCGCTGAACTTCTTTCAACATTCTCTCAGGTTGTGTCCAGTTGGTCCTGGAGCTTATTTTCATACATAATTTTACAGTGGCGAGCCCCTGACTGTTCAGAAGCCAGGAACACAAACTAGGAGCTTCTGCTATGTTGCTGACATGGTTTGTCACCCCTTTTGAAATGTCATTAATTAATAGCTGGCTGAAACTTTGATATATCATTGCATCACATCATCACTGCTACCATTTTAATGCAGGTTAATGGTCTTATTAAGCTGATGAACGGGGACAACACTGGACCAATTAATTTGGGAAACCCAGGTAGATTTACCTCTGCATTCGTTTGATTTTTCTCTACATGTGGTAATCTGTACTAGCAATCCTGTGGTAATGAAATTGATTTTCACGTCCTTGTCACTAAATGGTCATAATATATTGTGTTGTAGGTGAATTCACCATGCTGGAACTTGCTGAGAATGTGAAGGAGGTAAGATGAATATCCTGTTGCCGAACATCATTCCATGGGATGTTTCTGAATGGCATGCTAAGTTTCCCTGCTTTTACCTTGCAGTTGATCAACCCAGAGGTTACCGTCACAATGACTGAGAACACTCCTGATGATCCTCGTCAGAGGAAGCCAGACATTACAAAGGCAAAGGAAGTTTTGGGGTGGGAGCCCAAGATCGTTCTGCGTGATGGCTTGGTGCTCATGGAAGATGATTTCCGGGAGCGCCTCCAAGTGCCCAAGAAGAACCAGGCCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012337

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA012337&oldid=57160"