BGIOSGA012352

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Revision as of 09:45, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012352| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012352, complete gene.| tag = OS03G02...")
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Gene Name

BGIOSGA012352

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012352, complete gene.

LocusTag

OS03G0280700

Ensembl Transcript ID

BGIOSGA012352-TA

Ensembl Protein ID

BGIOSGA012352-PA

Length

6116

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:10444715..10450830

Sequence Coding Region

10444715..10444826,10446863..10446915,10447542..10449569,10449833..10450091,10450172..10450830

Genome Context

<gbrowseImage1> name=IndicaChromosome03:10444715..10450830 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:10444715..10450830 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGGCATTGGGCGCGGCAGATCGAGGCGCAGGGGGGAGGCCGGCGAAGGGTGGATGGAGCGGAATGCGGCGGCGGGCTCCACTTCCCCCGCCGCCGTCGATCACCGAGGTACTGTTTTGAGGAAACAAACAAGTAATCCTGGGATGCTTTCTGATTCTATGCTTGCTGCGGGAAACTGGCGAAGTAAATCTAAGAAGGCTAGTGGTACACCAATGAAAACACTTATTGATGAAGAATTCTCGAAAGATGTCAATGCTAGGCACACTTCACCAGGTGTTGTAGGAAGACTAATGGGTCTTGATTCACTGCCTTCATTTGGAGCCAATAACCAACACAGATATGCCCAAAGTCATGCAGAAAAGTCTTCACCTTGTTGCGCTCACGAGAGGCGTAGTTTTTCCGAATATATTCCACATCGGAGAAGCACAGATGAGATGCCAGAAGTCAAAGATGTTTTTGAAGTTATGGAGGCAACAAGAATGAAAATACACCGGAGCCCAAGATCTAAAAATGGAAATGTAACTTCAACATTTGGCAAGACCAGTAGTCCTGATCTAGATCAGATGAGGCAAAAACTTATGGATGCAAAGCGCCTTTCTACTGATGAATCCCTTCAGATATCAGAAGAGCTCAGTGAAACACTTGACGTATTGGCATCCAATAAAGATCTTCTTTTGCAATTTCTTCAAAAACTTGATCCTATAGTCAAAAGAGACCTACATGATCATGATTCTCCGTCCTCTACTGCAAATTGCATCACAATATTGAAACCATCTAGAAGAAATCAATTTACTGACACAGACAATATCTATTCACAAGATAAAGGTGCTGAAAGCTACTTCTACAAGCAAAAGGAAGTTGAACACTCTCAGAGTAGGCCATATACTAAGTTGCCCAATCAATCCCCAAAAGAAGACTCTGGTTCACTAAGGCAGAAACTGTCAAGGTCAAGTCACCAGGAAATCAGTGACAAGCGAGTTTGCTCCACACGGATTGTTGTCCTGAAACCAAGTCTTGATAAAGCTCAGGACATTGAAGGAGCCTTCGCCTTAAGGAATGAACTCTCTCGTTTTGATTTTAGGAGGCACAAACCATGTCATGGTGATGCTATGTGGAGCCCATGTACTGAAGAATACATAGGCCCCCTTAGAGATTCTGAAACATTCGATGATGTAGCGAAGGGATCTAAAGAAATTGCTAGAGGGGTTATGAAACAAATGAGAGCCGCTAGGGGTGTTGGAACCAGGAAACACATTTTCAAACCAGAGACTAGCACATTTGTTTCAGATGAAAGGTCGCAACCTCTGTCATCTCGTTCTAATGTCAAGTCCTCTGAGGTATTTCATAGATCCTCTGAGCTACATGATGGATATGCTTCTTCTAGCTTCACGTCCTCACCATCATATTCAACAGAAACAAAAGTTAGCAGGGAAGCAAAGAAACACCTCTCTAACAGATGGAAGGCCACCCACCGATATCACCATCAAGCAGACAAGAATAATGGATTCAGCATGCTTGGAGACATGCTTGCTCTTTCTGACCAGGAAGCTTCAAAAGTTGCTACCCAGAAAATATCAAACAGGAAATATCCAAAGGGTGAATCACAGAAAGATAGAATGACAAGCACATGTAACTCTCCTCTTGGCATCAGCAGCAATGATGGTTGGCGAGATGTGGCTACAGGTAGTTTACCAAGGTCCAAATCTCTTCCAACACCCTTCAATCGGGGAGTTCAGAAGTCAAACAACAGAAAACGAACTGGCAGACATAATGAGTTCTCTATGCTGAAAGATGTTCTCAAAGTAGGACCCTATGATTCTGAACATGCATGCAACAGCAGGAATAGAAAATCTCTGTTTCAAGATGCAACATTTCATAGCGATGGAGCTGATCGTGTCTCCTCAGATAACGAGGAAAGAGCGATAATTGAACGCGAAATACATGTAAATTCAGAGGAACCAATAAATGGTATCGCCTTGGCCAATTCATCTAAAGGGACACTTCTACATCCTTCAAATCCTGACAATGAGTTAGATACAGTGTATTACCTGGATACCAGTCCTGTGGTTCCTGGACAGAAGAAAGAACTATGTTCTCCTGATAGGCAGAACCAGCAGATACATCAACAGTCACCAATAGAATCAGACGACCATCTTCTTGTACCTAGACTCAACATTTCTATGACTCAGGCTGAGGGGATCGAACAGCATCAGTGTGATGACAATCCACAGTGCAATTTTGAGGAAAAATCAGTATCTGCCATGAGGATTGACGACCATCAAAGTGATGGCAATCAAGTCCCATGGATGATTCCCCAAACAGGATCAGAATCTCCAGTGAGCTCCGACAAAGATGATCAACAAAGTCCAGTTTCTGTTCTTGAATCTTCCTTGGACGCTGAAGACATTTATTCTGGTGATTTTGAGAAAATTAGTGCTGATCTTCAAGGACTGAGAATGCAACTGCGACTTCTCAAGATGGAAGCTACAGACAGCGCAGATGACACTGAGCTAATATCAAGTGATGATGAGCTTACGACAGAAAGTCAGCCACTTCCAGATAAGGAAATATCCCCTACTTTTAGGGATGAAGAAGAAAGGGATTTCTCTTACGTGCTGGATATGCTGATTGTTTTGGGCATTAATACTGCTAACCGGGATCAGCTACTAGACATGTGCTACTTATCAGAGTGCCCAGCTGGCTCTGATGTGTTTGATGTACTTGAAAACAAGTACAATAGCCTCATTCTGTGGCCGTCACCGGAGAGGAAGCTCCTGTTTGATCTCACAAATGATGTCATTGCAGATATAATCACTTCTGTGATGCAGCATAGCTCAAAGGGGTTGTCGTGGAGCTGCTCGTCCAGATTGGACCAGGAGGGATTCGTTGAGGTGGTGTGGCAAAGGGTGGTCGAGCTTCGGCAAGAAATGGAGTATGCTCATGAGGGCCTATTCATGGACTTGGGGTGGGTTGGTTCTGAAGATGGCATCGATCTTGTTGCTAGTGAGGTCGGGAAAATGGTACATGAGGATCTCCTTCAAGAAACCATATCTGAGTTTCTGGGGGTGACAAAATCTGCTATGATCTGTGGCTGGAATGAACCATGA</cdnaseq>

Protein Sequence

<aaseq>MAGIGRGRSRRRGEAGEGWMERNAAAGSTSPAAVDHRGTVLRKQTSNPGMLSDSMLAAGNWRSKSKKASGTPMKTLIDEEFSKDVNARHTSPGVVGRLMGLDSLPSFGANNQHRYAQSHAEKSSPCCAHERRSFSEYIPHRRSTDEMPEVKDVFEVMEATRMKIHRSPRSKNGNVTSTFGKTSSPDLDQMRQKLMDAKRLSTDESLQISEELSETLDVLASNKDLLLQFLQKLDPIVKRDLHDHDSPSSTANCITILKPSRRNQFTDTDNIYSQDKGAESYFYKQKEVEHSQSRPYTKLPNQSPKEDSGSLRQKLSRSSHQEISDKRVCSTRIVVLKPSLDKAQDIEGAFALRNELSRFDFRRHKPCHGDAMWSPCTEEYIGPLRDSETFDDVAKGSKEIARGVMKQMRAARGVGTRKHIFKPETSTFVSDERSQPLSSRSNVKSSEVFHRSSELHDGYASSSFTSSPSYSTETKVSREAKKHLSNRWKATHRYHHQADKNNGFSMLGDMLALSDQEASKVATQKISNRKYPKGESQKDRMTSTCNSPLGISSNDGWRDVATGSLPRSKSLPTPFNRGVQKSNNRKRTGRHNEFSMLKDVLKVGPYDSEHACNSRNRKSLFQDATFHSDGADRVSSDNEERAIIEREIHVNSEEPINGIALANSSKGTLLHPSNPDNELDTVYYLDTSPVVPGQKKELCSPDRQNQQIHQQSPIESDDHLLVPRLNISMTQAEGIEQHQCDDNPQCNFEEKSVSAMRIDDHQSDGNQVPWMIPQTGSESPVSSDKDDQQSPVSVLESSLDAEDIYSGDFEKISADLQGLRMQLRLLKMEATDSADDTELISSDDELTTESQPLPDKEISPTFRDEEERDFSYVLDMLIVLGINTANRDQLLDMCYLSECPAGSDVFDVLENKYNSLILWPSPERKLLFDLTNDVIADIITSVMQHSSKGLSWSCSSRLDQEGFVEVVWQRVVELRQEMEYAHEGLFMDLGWVGSEDGIDLVASEVGKMVHEDLLQETISEFLGVTKSAMICGWNEP</aaseq>

Gene Sequence

<dnaseqindica>1..112#2149..2201#2828..4855#5119..5377#5458..6116#ATGGCGGGCATTGGGCGCGGCAGATCGAGGCGCAGGGGGGAGGCCGGCGAAGGGTGGATGGAGCGGAATGCGGCGGCGGGCTCCACTTCCCCCGCCGCCGTCGATCACCGAGGTTCAGTTATCTTCTCTCCTCCCCCAATCTCCTAGCCGTCTTTCTCCTCTTCTTTATTTTGAAATTTTGCATCTTTTTTTTTTTCTCCGCGGAATTTTCGGGTGAGCTTTTTTTAGGAGTCCATGGTTAAAGATCTGCTACTGAAGGTTTTTTCGGGGTTTACCTTACGATTCTGAATCTGAATGAAAGGTTCTTTTTTTTTTGTCATGATCTACACCTCAGAGAAATATCATATAAGTGGGTGTTACAGAAAAGGACGCTTTTTTTTTCTCTCTCCCTTGGCTGATCACGTTATCAAATCGGGAACTTGGGGTAACTAGCTTGACATTTGATCTTCTGAGTTCGAAGAAAACATTGCGGAGTAAAACAATGTAGAATTTTCTTTTTACCCTTCTGTTTTAAAATAAGGAGGCATAACTTTCACATGGACTTTAGGTCCTAGTCAAGCCTTTATTGGAGAGAGAGAGGATTCTTGCTTTCAAAATTCAAATGATTCTAGCGGACTTGTTTTGATTTGTTTGCTTTTCCTTTATGTTGTTTCATTGCAGCTACAATAGCCTAGATTCTAGGAGTACTAAAGTACCAAACATGAAAGATTTCCATTCAGTTTTTGCATCCTGGATTGAGCTGCTAGAGCATTGGCCGCATTTTATTATTGGGGGTCCTCTAGAGTGTGCAATTCTAAGGAAATGAGATATTGTCGACTTGCCTATCCCACGAGATCACGCAAAGAAACCTCATTTGCCCGTAAATTGCTGGTTATGTAAGTAAAAGCATTAAATAATGTTCTTTTGCGTCCCCATTTCAGTTGGATGCCGTGAAGGTTCATGGCCAAGTGGGCTTCTTATTCTAATCACCAAGCGAATCTTCGCGTAAACATAGATTTTTCACTTAGTCTGTAAAAGAGCCGTTCACTACGTTAACTAGTGAAACATGTTTTTTTTGCCAACTCGATGAATTGACATTTGATCTACAAAATGTTACATCCTGGTAGAATTTTCAGCCTGACGCTGCCACTGCCAAATCATGAAACCAAAGCACTGCTATGTGCTCGTCTAAGTCGTCTTCTATGTGTGCTAGCAAGTTTGTAAGAATATCCCCTGTACAAGTGGCGTTATGTGATGAAAGGTTATTTAGTTACTTACTTATTGTGGTAAACAATTTATTATTGTTACGTAACTTGTGGTATCTTGGTTTTGCCTCTGAACTCTCTGCAGTTCAAACGTAAAACTTTTTTCCTCATAAAATGAGCAGGTAATTCGGAACTCCTAGGGTATGTTTGTAAACTGAATCCCATTCAATATTACTTTTATTGGGCCTCCCTGCACCCCACAGATTTTGTGCACAAGTTGGCTGTTTCAATCTATTTATTTTTTATTTTTCATTTCACATTGATTCGCTTGAAGGAATTGGATCAAGAGAGCTCGAAAACCTCAATCCTACTCAACCTTTTCCTTTTAACTTCTCCTTTTTAGACTTGATGTTTGTATATTAATAGTATATCAAGTATATTTTCATGCTGGCAAAAGTAAATTTATTTTCTTGTGGTGACTGGTCTATGTGCTATCAAAGCATGCCTGATCAAGGCCAAAAGACAGTAATACATGTCTTCCTACTCACCTTCCCTGTCTTTTGTGGTTAGCAGAAATTGAACATGACCCTAAACTCTTTGTTCTATCTCTTAGGTTGAGTTCGTTAGGACTGGTTGGGAACAAGTATCCTGTGCACGGAAAACGGAGCGGTCCATTAGCGCGTGATTAATTAAGTATTAGCTATTTTTCCTTCAAAAATGGATCAATATGATCCTTTAAGTAACTTTCATATAGAAACTTTTTGCAAAAAATGTACCGTATAGCAGTTTGAAAAGCGTGCGCGCGGAACACGAGAGAGAGGAGTTGGGAAAACTGGCTGCCGAACACAGCCTAATAGTTCAACACCAAGTGCCTTCTGCTTGCCATTTTACCGTGCTGTTTGTTTTGCTATTGCTGTGGTATATCTACAGGAAACATTCACTGTTACCTTTTTCTTTGATTCAGGTACTGTTTTGAGGAAACAAACAAGTAATCCTGGGATGCTTTCTGATTCTATGGTGAGTGATTTGCATTTAGTAGAAGAGGTATATCATATATTGCACATACTTTTTTAGTTTCGGTTATAAATAAGGAGCTCAAAAACATGTTCTTTTCTCTAGCTTAATGATGATTACCTTTGGCATAAAACTAGAAGGTCAAAACTGGGATGCACATGTTCTTCTTATCTCAACACTTTCCATATCTCTTGTAGTACAAATGAACAGCTAATAGTCAAATCTGAAAATTGGCAGCACATTATTTTCTTCTGTCACTATACCTTTGTATCTCTTGTACAAGTGAATGTCGCTGAAAATGGGCAGTACATAACTTTGTTCTGTTACTATACATTGCATATCTTGTAATACAAGTGAATGTTGCTAATACTCAGATCTGAAAATGGGCAGTACATAATTTTCTTTCGTTACTATACCTTGCATATCTTGTAATACAAGTGAATGTTGCTAATAGTCAAATCTGAAAGTGGGTACTACATAATTGTCTTCTGTTACTATTCTAGTACAAGTGAACGTTGCTAATACTCAAATCTGAAAATGGGTAGTACATAATTGTCCTCTGTTACTATACCTCGTTCCTATATTTTAATTAATGGATTGCTATGCCTTTTTTTTTCTGCTCTTCTCAGCTTGCTGCGGGAAACTGGCGAAGTAAATCTAAGAAGGCTAGTGGTACACCAATGAAAACACTTATTGATGAAGAATTCTCGAAAGATGTCAATGCTAGGCACACTTCACCAGGTGTTGTAGGAAGACTAATGGGTCTTGATTCACTGCCTTCATTTGGAGCCAATAACCAACACAGATATGCCCAAAGTCATGCAGAAAAGTCTTCACCTTGTTGCGCTCACGAGAGGCGTAGTTTTTCCGAATATATTCCACATCGGAGAAGCACAGATGAGATGCCAGAAGTCAAAGATGTTTTTGAAGTTATGGAGGCAACAAGAATGAAAATACACCGGAGCCCAAGATCTAAAAATGGAAATGTAACTTCAACATTTGGCAAGACCAGTAGTCCTGATCTAGATCAGATGAGGCAAAAACTTATGGATGCAAAGCGCCTTTCTACTGATGAATCCCTTCAGATATCAGAAGAGCTCAGTGAAACACTTGACGTATTGGCATCCAATAAAGATCTTCTTTTGCAATTTCTTCAAAAACTTGATCCTATAGTCAAAAGAGACCTACATGATCATGATTCTCCGTCCTCTACTGCAAATTGCATCACAATATTGAAACCATCTAGAAGAAATCAATTTACTGACACAGACAATATCTATTCACAAGATAAAGGTGCTGAAAGCTACTTCTACAAGCAAAAGGAAGTTGAACACTCTCAGAGTAGGCCATATACTAAGTTGCCCAATCAATCCCCAAAAGAAGACTCTGGTTCACTAAGGCAGAAACTGTCAAGGTCAAGTCACCAGGAAATCAGTGACAAGCGAGTTTGCTCCACACGGATTGTTGTCCTGAAACCAAGTCTTGATAAAGCTCAGGACATTGAAGGAGCCTTCGCCTTAAGGAATGAACTCTCTCGTTTTGATTTTAGGAGGCACAAACCATGTCATGGTGATGCTATGTGGAGCCCATGTACTGAAGAATACATAGGCCCCCTTAGAGATTCTGAAACATTCGATGATGTAGCGAAGGGATCTAAAGAAATTGCTAGAGGGGTTATGAAACAAATGAGAGCCGCTAGGGGTGTTGGAACCAGGAAACACATTTTCAAACCAGAGACTAGCACATTTGTTTCAGATGAAAGGTCGCAACCTCTGTCATCTCGTTCTAATGTCAAGTCCTCTGAGGTATTTCATAGATCCTCTGAGCTACATGATGGATATGCTTCTTCTAGCTTCACGTCCTCACCATCATATTCAACAGAAACAAAAGTTAGCAGGGAAGCAAAGAAACACCTCTCTAACAGATGGAAGGCCACCCACCGATATCACCATCAAGCAGACAAGAATAATGGATTCAGCATGCTTGGAGACATGCTTGCTCTTTCTGACCAGGAAGCTTCAAAAGTTGCTACCCAGAAAATATCAAACAGGAAATATCCAAAGGGTGAATCACAGAAAGATAGAATGACAAGCACATGTAACTCTCCTCTTGGCATCAGCAGCAATGATGGTTGGCGAGATGTGGCTACAGGTAGTTTACCAAGGTCCAAATCTCTTCCAACACCCTTCAATCGGGGAGTTCAGAAGTCAAACAACAGAAAACGAACTGGCAGACATAATGAGTTCTCTATGCTGAAAGATGTTCTCAAAGTAGGACCCTATGATTCTGAACATGCATGCAACAGCAGGAATAGAAAATCTCTGTTTCAAGATGCAACATTTCATAGCGATGGAGCTGATCGTGTCTCCTCAGATAACGAGGAAAGAGCGATAATTGAACGCGAAATACATGTAAATTCAGAGGAACCAATAAATGGTATCGCCTTGGCCAATTCATCTAAAGGGACACTTCTACATCCTTCAAATCCTGACAATGAGTTAGATACAGTGTATTACCTGGATACCAGTCCTGTGGTTCCTGGACAGAAGAAAGAACTATGTTCTCCTGATAGGCAGAACCAGCAGATACATCAACAGTCACCAATAGAATCAGACGACCATCTTCTTGTACCTAGACTCAACATTTCTATGACTCAGGTAAATTTAGGTGAATTTATTTCTTGCATTATGTTGACCATTTCCTATGGAAAAATTCATCCATAGGTGTGAAAAGCTAGATGTATTTTTTCTATATGAGTTTTTATGTGTATCATCCATTTTTCCTCAGAACACATTTTTCATGTGCACGTCTAGTGCTAAAGCCTTTGTTGTGAATATTCTGTGTGGATGATATCATGTTGATTTGTTTTCTGTTGCCTTTCTTGACATCTTCTGATTGCTGACTTCATCCATGTACTCAGGCTGAGGGGATCGAACAGCATCAGTGTGATGACAATCCACAGTGCAATTTTGAGGAAAAATCAGTATCTGCCATGAGGATTGACGACCATCAAAGTGATGGCAATCAAGTCCCATGGATGATTCCCCAAACAGGATCAGAATCTCCAGTGAGCTCCGACAAAGATGATCAACAAAGTCCAGTTTCTGTTCTTGAATCTTCCTTGGACGCTGAAGACATTTATTCTGGTGATTTTGAGAAAATTAGTGCTGATCTTCAAGGCAAGTAACCCAGTTCTTGTTTCCCTAATCATCTTGCTACTAATTCATGTTCTTAAGTTTGATTTACTGGGATATTGCAGGACTGAGAATGCAACTGCGACTTCTCAAGATGGAAGCTACAGACAGCGCAGATGACACTGAGCTAATATCAAGTGATGATGAGCTTACGACAGAAAGTCAGCCACTTCCAGATAAGGAAATATCCCCTACTTTTAGGGATGAAGAAGAAAGGGATTTCTCTTACGTGCTGGATATGCTGATTGTTTTGGGCATTAATACTGCTAACCGGGATCAGCTACTAGACATGTGCTACTTATCAGAGTGCCCAGCTGGCTCTGATGTGTTTGATGTACTTGAAAACAAGTACAATAGCCTCATTCTGTGGCCGTCACCGGAGAGGAAGCTCCTGTTTGATCTCACAAATGATGTCATTGCAGATATAATCACTTCTGTGATGCAGCATAGCTCAAAGGGGTTGTCGTGGAGCTGCTCGTCCAGATTGGACCAGGAGGGATTCGTTGAGGTGGTGTGGCAAAGGGTGGTCGAGCTTCGGCAAGAAATGGAGTATGCTCATGAGGGCCTATTCATGGACTTGGGGTGGGTTGGTTCTGAAGATGGCATCGATCTTGTTGCTAGTGAGGTCGGGAAAATGGTACATGAGGATCTCCTTCAAGAAACCATATCTGAGTTTCTGGGGGTGACAAAATCTGCTATGATCTGTGGCTGGAATGAACCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012352