BGIOSGA012365

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Revision as of 09:46, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012365| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012365, complete gene.| tag = OsI_110...")
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Gene Name

BGIOSGA012365

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012365, complete gene.

LocusTag

OsI_11058

Ensembl Transcript ID

BGIOSGA012365-TA

Ensembl Protein ID

BGIOSGA012365-PA

Length

7001

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:10621904..10628904

Sequence Coding Region

10621904..10621938,10622654..10622723,10622833..10623738,10623828..10624001,10624115..10624228
,10625049..10625107,10625244..10625310,10625379..10625430,10626147..10626565
,10626863..10626924,10627382..10627451,10627645..10627725,10627807..10627908
,10628010..10628140,10628569..10628683,10628869..10628904

Genome Context

<gbrowseImage1> name=IndicaChromosome03:10621904..10628904 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:10621904..10628904 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCGCGGCGGCGTTCGACTTCGAGTACAAGAGGGACGCGTATGGATTCGCGGTGCGGCCGCAGCATCTGCAGCGTTTCCGCGAGTATGCCAAGATTTACAAGGAGGAAGAAGAGGAGAGAGCGGACAGATGGAAGGACTTCTTGGACAGGTTGGCTGAATCTGCAGATGACATCACAACCAGCATTTCACCTTCCAAAGAGGACTCTGCTGCTGGAGATGTCAATGGTGGAGAACACCTTGATGGAGCTGAAAACTTAGAGAATAGCAATAGGGGTGGAATAAAATGCAACAATGAAGAAGAGGAGGGAGAAGAGGATGCAGAAAAGAGCGATACACCAGAAAATTCGAAGGAAATTGATGGCAACAATCAATCGCAAGAAGCAAATGGTGAGGCGGACGATATCAATGATGTATCTGCCAACTCAGAAAATCTGAAACAGGAGAGCATTGCAAACTCCGTAGAATCGGACAAAGCTCCAGAAGAACTGAAGGAGGTGAGTGGGTGTTCAGAGGAACTATTAAATGATGAGAATGGTGATTCTGAAGGATTAAAAGATTCTCATGGTGCCTTGGAAGGATTAGGTGAAGCGAACAACGACAACTCGGAAAAGTTAGAAGAGCTTTTCTTGGATAAGGGGTTGTTGGATGAACTGAAGCCTATAAGAGTTGAGTCTGGGAAGCGGGTGCGGGCATCAATCAGAATCATTGAGAAAATGATGAGCTCTCGAGTGGGCAAGATAAGGAACACTGCAAATGACATGTGTGGAAATGGTGAAGCACAGCTTGCATCAATTGAAGAGGAGGAAAGGGCAGCAGATAAGAGTTGTAGAGGGGATCCAGCAGAGGAATCTTCTAATCCAGATAAGGTGGAGCAGGCACAGGACAGGGAACAAGGTGATTCTGCGAGTGCTGCTTTGGAGGGAGGCAATGGCGAGTCTTATTTCCCTTGGAGGGAGGAACTCGAGAGCTTGGTCCGTGGAGGTGTGCCAATGGCTCTTAGAGGAGAGATGTGGCAAGCATTTGTGGGTGTTGGTGCTCGTAAAATTACTGGGTACTACAACAAATTACTAGATGAAGGTACTGAGGAATTGGATGAAAAGAACCCTGAGGACCAAGAGTTGAAAGATCAGACAAATGCACAGAAAAAGCCCCCAGAGAAGTGGAAGGGACAGATAGAGAAGGATTTGCCTCGAACATTTCCGGGACACCCTGCACTAGATGAGGACGGGAGAAATGCTTTGCGACGGTTATTAACAGCATATGCAAGGCATAACCCATCAGTTGGATACTGCCAGGCCATGAACTTTTTTGCTGGCCTATTTTTATTATTCATGCCTGAAGAGCATGCATTCTGGGCTCTGGTGGGGGTCATTGATGAGTATTTTGATGGTTATTACACTGAGGAAATGATTGAATCTCAGGTTGACCAGCTTGTTCTTGAGGAAGTTGTACGAGAAAGATTCCCAAAACTTGGGCCTGCCCTGGTGACCACAAAGGATGCTGGAGATGCAATTACATTATTGCAATCTCTTGCTGGCTCTACTTTTGACAGCAGTCAACTTGTGTTGACAGCTTGTATGGGTTTTCAAGCAGTCAGGGAAATAGGGCTGCAGGAGTTAAGGAAAAAACACAGGCCTGATATTATATCTGCTATGGAGGAAAGATCAAAAGACCGCCATTCTTGGAAAGATAAGAAGGGTTTAGCAACTAAACTTTACAGCTTTAAACATGATCCTCTATGCCCACAAGTTAATTCCAAGGAAGGGGAAGATGATTTGCAAGTGAATGGGGAAATGCAATTTTTAGATTCTGGGTCAGCAAATCTAGAAACCTACCTTACTAGTTCAGCTCTAGATAATGAGTTGGAAGAGGGCATTGATCTTCAAGATCAGGTAACATGGTTGAAAGTTGAGCTGTGCAAACTGCTCGAGGAGAAAAGATCAGCTGAACTCAGAAGCGAGGAGTTGGAAACTGCTTTGATGGAAATGGTCAAGCAGGACAACAGACATATGTTGAGTGCTAAGGTTGAGAAATTGGAGGCAGAGGTATCTGAGTTGCGAAAGTCCTTTGCAGACAAGCAAGAGCAAGAGCAGGCAATGCTTCAGGTTTTGATAAGAATGGAGCAGGAACAGAAAGTGGCAGAAGATGCCCGCATAGCTGCTGAGAGAGATGCTGCTGATAAGAAATATGCTGCTCAGTTGCTCCAGGAGAAGTATGACGCAGCGATGGCAGCACTTCGACAAATGGAGAAGAGAGCTGTAATGGCCGAAACTATGTTGGAAGCTACAAAGCAGTACCAGGCAGGGCAGTTTAAGGCCAACCAGTCCTTCAATCCAAGTTCACCTCGTGCTGCCCCTCAGTCTGGGAAGCCAAATCAAGATCCTAACCAGGATGCACCTAACAGGAGATTGGGCTTGCTTTCTAGGGGCCTTGGTTGGCTAGAGAAAAGCAAGGGAAAGTCTAGTTCCACTGAAACACCTGAAGGCTAA</cdnaseq>

Protein Sequence

<aaseq>MGAAAFDFEYKRDAYGFAVRPQHLQRFREYAKIYKEEEEERADRWKDFLDRLAESADDITTSISPSKEDSAAGDVNGGEHLDGAENLENSNRGGIKCNNEEEEGEEDAEKSDTPENSKEIDGNNQSQEANGEADDINDVSANSENLKQESIANSVESDKAPEELKEVSGCSEELLNDENGDSEGLKDSHGALEGLGEANNDNSEKLEELFLDKGLLDELKPIRVESGKRVRASIRIIEKMMSSRVGKIRNTANDMCGNGEAQLASIEEEERAADKSCRGDPAEESSNPDKVEQAQDREQGDSASAALEGGNGESYFPWREELESLVRGGVPMALRGEMWQAFVGVGARKITGYYNKLLDEGTEELDEKNPEDQELKDQTNAQKKPPEKWKGQIEKDLPRTFPGHPALDEDGRNALRRLLTAYARHNPSVGYCQAMNFFAGLFLLFMPEEHAFWALVGVIDEYFDGYYTEEMIESQVDQLVLEEVVRERFPKLGPALVTTKDAGDAITLLQSLAGSTFDSSQLVLTACMGFQAVREIGLQELRKKHRPDIISAMEERSKDRHSWKDKKGLATKLYSFKHDPLCPQVNSKEGEDDLQVNGEMQFLDSGSANLETYLTSSALDNELEEGIDLQDQVTWLKVELCKLLEEKRSAELRSEELETALMEMVKQDNRHMLSAKVEKLEAEVSELRKSFADKQEQEQAMLQVLIRMEQEQKVAEDARIAAERDAADKKYAAQLLQEKYDAAMAALRQMEKRAVMAETMLEATKQYQAGQFKANQSFNPSSPRAAPQSGKPNQDPNQDAPNRRLGLLSRGLGWLEKSKGKSSSTETPEG</aaseq>

Gene Sequence

<dnaseqindica>1..35#751..820#930..1835#1925..2098#2212..2325#3146..3204#3341..3407#3476..3527#4244..4662#4960..5021#5479..5548#5742..5822#5904..6005#6107..6237#6666..6780#6966..7001#ATGGGCGCGGCGGCGTTCGACTTCGAGTACAAGAGGTAAATCGCCGAGACCGAGCTGCTTACAGCGAAGCCATGCAGATTGCAGGCAGGCAGGCAGAGCAGCAGGAGTCAAAGGCGAGGGCGCGCGCGCTCGCCGCGGCATCGTCGTCCCGCGCGCCACGTGCTTCCCGCTCTAGCCTCGATGCGAAAAACGAGTTTTTTTTTCTTCTTCGTCTTCTGGTTCCCCCCCAATCTGCGGTTCCTCTCTTTCTTGTTCTTCTATTCCTCTCTCTCTCTCTATATCTATCTCCGTTGCTTCGCGTCTGGGGCCTCGGGCGGCGCGCGCGGGGAGGGGCGTGGTGCAATTAACGGGCGCGCAGCTCCACCTTGCCGCGATCCGTCGCAATTCTTTGATTCCCTTCGCGGAATTTTTCTTTCTTTTTTTTCCCCATTCCATGTGCGTGGATCTCGGGGCGCGGGGCTAGGGTTTAGTATGGCTTTGGTCAATCCATGGCGTGCGGTGCCGAGGTCGCCCTGTCGCTTCTTCTTTAATGCGCGTTGATCCCCATGGACGGCGAGTGCCGGTAAAACCCAATAAAAGGCGCCTCCTTTTCCTTTCCTCCGCCTCCCTCTCGCTAGCATTTATTGTCTTGTATTGTTGCATACGTCGTTGTTCGTTTAGGTTGGATTTGGGTTAGGATTTGTGTGGCATAATGCGGTGGTTGGAATTGCCTTCGGGAGTTGTGGTTGATGGTGGTGAGGTTTGGCGCAGGGACGCGTATGGATTCGCGGTGCGGCCGCAGCATCTGCAGCGTTTCCGCGAGTATGCCAAGATTTACAAGGTAATTTACCAGGGGCAGAGTAGAAATGGAAATGCGTTGTTTTTGTTTGTTTCAGGTTAAGTTTTGATACATACTGTACTATTTTTTTGGCTGTTGTTTGGTTTATCAGGAGGAAGAAGAGGAGAGAGCGGACAGATGGAAGGACTTCTTGGACAGGTTGGCTGAATCTGCAGATGACATCACAACCAGCATTTCACCTTCCAAAGAGGACTCTGCTGCTGGAGATGTCAATGGTGGAGAACACCTTGATGGAGCTGAAAACTTAGAGAATAGCAATAGGGGTGGAATAAAATGCAACAATGAAGAAGAGGAGGGAGAAGAGGATGCAGAAAAGAGCGATACACCAGAAAATTCGAAGGAAATTGATGGCAACAATCAATCGCAAGAAGCAAATGGTGAGGCGGACGATATCAATGATGTATCTGCCAACTCAGAAAATCTGAAACAGGAGAGCATTGCAAACTCCGTAGAATCGGACAAAGCTCCAGAAGAACTGAAGGAGGTGAGTGGGTGTTCAGAGGAACTATTAAATGATGAGAATGGTGATTCTGAAGGATTAAAAGATTCTCATGGTGCCTTGGAAGGATTAGGTGAAGCGAACAACGACAACTCGGAAAAGTTAGAAGAGCTTTTCTTGGATAAGGGGTTGTTGGATGAACTGAAGCCTATAAGAGTTGAGTCTGGGAAGCGGGTGCGGGCATCAATCAGAATCATTGAGAAAATGATGAGCTCTCGAGTGGGCAAGATAAGGAACACTGCAAATGACATGTGTGGAAATGGTGAAGCACAGCTTGCATCAATTGAAGAGGAGGAAAGGGCAGCAGATAAGAGTTGTAGAGGGGATCCAGCAGAGGAATCTTCTAATCCAGATAAGGTGGAGCAGGCACAGGACAGGGAACAAGGTGATTCTGCGAGTGCTGCTTTGGAGGGAGGCAATGGCGAGTCTTATTTCCCTTGGAGGGAGGAACTCGAGAGCTTGGTCCGTGGAGGTGTGCCAATGGCTCTTAGAGGAGAGGTGCAACTGTAACCAGAATTATCTGTACTGTTTTTATATCCTTATAATAGATATATACCTACACTCACATATGGTTGATTTTATTGCAGATGTGGCAAGCATTTGTGGGTGTTGGTGCTCGTAAAATTACTGGGTACTACAACAAATTACTAGATGAAGGTACTGAGGAATTGGATGAAAAGAACCCTGAGGACCAAGAGTTGAAAGATCAGACAAATGCACAGAAAAAGCCCCCAGAGAAGTGGAAGGGACAGATAGAGAAGGTTGCTCTCTGATTTGAAATGGGAGGAACTAATGTCATGTTTTAGAAGTTCTACTGTTCTAGGTCTCTACTCTCTACACACTTGAATGCTTGATTTGCCTGTTATCATTATAGGATTTGCCTCGAACATTTCCGGGACACCCTGCACTAGATGAGGACGGGAGAAATGCTTTGCGACGGTTATTAACAGCATATGCAAGGCATAACCCATCAGTTGGATACTGCCAGGTGAACAAATGCTCATTGGATAATTTTATGTTAGTTTTTAACCTCTTGTAATCTACTCCCTCCGTCCCATAATATAAGGGATTTTGAGTTTTTGCTTGCAACGTTTGACCACTCGTCTGATTCAATTTTTTTTGAAATTATTATTTATTTTATTTGTGACTTACTTTATTATCCACAGTACTTTAAGCACAACTTTTCGTTTTTTATATTTGCAAAAAAATTTGAATAAGACGAGTGGTCAAACGTTACAAGCAAAAACTCAAAATCTCTTATATTGTATGACGGAGGAGTATAAGAGAAATTTTACAGTCCTTGAGAAAGTACCTAGAGGTACGAAGATTTTACACTAGAAATTTGGTACCTCAAGGTACTTATTACCTAGAGGTACCAAATTTTACACTAGAAAATGTGGTACCTTCTCAAGGATGGTAAAATTACCCAATTTATAATCATATGCATGTGCTGCGAAATAATGTATTACCTTTGAGTAAAAGATGAATTGATGAGGGCTGTATTTTATACTGAGAGATCCATCGTGAACTATGAAACTTGTCACTTTTCAATCATCCACGCTGACAAACGAATTATGAATATTGTAACTTCAGAGGTGATTTACAAGGTTAAAATCAATTAAGTCTATCCCAAGTTCCAAATATGCAATTCAATTATTAGCTAGCTTTGCAAGGCTGGCAAAATCATTAAATGTTCTATATGCTAGACACCATTAATCTGGCTCAGAAACATCTGTTGCATTTTCTTTTGTCAATATAACTAGAGTGCCTTTACTCTTTACCTTATATCTTCATTGTTCTTCTTGCAGGCCATGAACTTTTTTGCTGGCCTATTTTTATTATTCATGCCTGAAGAGCATGCATTCTGGTATGCTTTTATTAAATGCCTTGTCTCTTGAAAAAAAATACTTGATTGATAATTTTTCTTTGTATTTTCAAGATTGTATGCTAACTCTAATTCCACTTTATTTTTCTCGTTTTCGCTCATCATTTTGAATTTTCAGGGCTCTGGTGGGGGTCATTGATGAGTATTTTGATGGTTATTACACTGAGGAAATGATTGAATCTCAGGTACTTCTTAATTCATGATACATGTAATGTTTCCCAAAATCCTCGTTAATGTTACTGCCCGTTTACAGGTTGACCAGCTTGTTCTTGAGGAAGTTGTACGAGAAAGATTCCCAAAACTTGGTTTGTATTTCAATGATATTATTACTACACTTGTCCTTTTGTAGCATTCTGCATTTCACATTATCTTAAAAAAAAAAACATGGTCCTGGTCATGCTTTTGTATTCAGTTGAAATGTTGAGATGACTTTATTTGTTTGAACACATAATGTATCAACTTTGTGGTGTATCACTCTGTACTTACATCAATTACAACCCTCTTTCAGCAAAGCATATGGATTTCCTGGGAGTTCAGGTGGCATGGGTGACTGGACCATGGTTTCTTTCAATTTTCATCAATATGCTTCCATGGGAAAGTGGTCAGGTTTTATGCAATAGCTTGGTGCTTTCATTAAGATATATACTCATACTTATACATTTGATGTTCGGTACCAGTCCCTTAAATTGAACGAAACATGCATACCAAATTTTTAGGATAATGAGAATCCCGTTCTATTATTTTTTGAATGTTACATATTCTTGTCATGTATGTTAATAATTAGTTAGGTTTAACATCATCTGATTGAAACTTTTGCATTCTCTTAGTTCTTCGTGTTTGGGATGTGATCCTTTTTGAAGGAAATCGAACGATGTTGTTCCGGACAACGCTTGCTTTGCTCGACTTATATGGTATAACTTAATCCCTGAAAAAGCTATTGTTTCCTATTATTTGTTCTTTTCTAATAAGCATTGATGTGTAAGTGTAATCTACACTGTTGTCTTTGTATGTTGATTTGTAGGGCCTGCCCTGGTGACCACAAAGGATGCTGGAGATGCAATTACATTATTGCAATCTCTTGCTGGCTCTACTTTTGACAGCAGTCAACTTGTGTTGACAGCTTGTATGGGTTTTCAAGCAGTCAGGGAAATAGGGCTGCAGGAGTTAAGGAAAAAACACAGGCCTGATATTATATCTGCTATGGAGGAAAGATCAAAAGACCGCCATTCTTGGAAAGATAAGAAGGGTTTAGCAACTAAACTTTACAGCTTTAAACATGATCCTCTATGCCCACAAGTTAATTCCAAGGAAGGGGAAGATGATTTGCAAGTGAATGGGGAAATGCAATTTTTAGATTCTGGGTCAGCAAATCTAGAAACCTACCTTACTAGTTCAGCTCTAGATAATGAGTTGGAAGAGGGCATTGATCTTCAAGATCAGGTAAGAACTTCTCTGTACTGATTTATTTGTACTGAATGAGCTGATGTTTTCTCTAACAGAAACAAAAAAACAATGTGCTTATAATATGCATTCAAATTTATTGGTCATTCTGATAATTGACATTCAGGAATTTGTGTCACGGTCCTTCTGTATAATTGAATGGTTCCTATCAATATTTACGTTCCTTTCTGAGCTTAATATTCAGATGTTTTTTTGCCAATATGGAATTTTTAGTTACCTTTTCTTATGTTAAACATGATGAATTTCTATACTCAACTACTCAAGCAATGCTCACAGGTAACATGGTTGAAAGTTGAGCTGTGCAAACTGCTCGAGGAGAAAAGATCAGCTGAACTCAGGTTTGTTGTGCTTCTATTCTGGATCTATTTATCCACATAGTTAAATTGTACAGGTATAGTTACAAAGAAGAATAGCAATAGTACGGAAGCTATCCCAGCCACTGCTAGATATAACAACCTGCAAAACTCGGAACTCTTAAATATAAATCGTTAAGGAGGGAATTTCTCCATCTAAACTTATTTGGAGCATTCCATCAAAGATGTGTCTGGTTCTTTCCAACCAGATAGGCCAGCTCCCAGCATTCAAGAGTAATTAGTTCTTTAAGAATAATTCCCCCTTTTCTCAGTTTCACAGTAAATTTTAAATAATTTTTGCATCTAAAATAATTGGTAAAGTCTTCGTCAAATTCATGCATACTTTCATCTAAGTTGTCGCTGTAATGTTTTGGGCCATTAACTTAGTTTTGTACTGTGTCCAACTCCTATCATGATCTATTAACACATGTCATGCTCTCAGAAGCGAGGAGTTGGAAACTGCTTTGATGGAAATGGTCAAGCAGGACAACAGACATATGTTGAGTGCTAAGGTAAGATGTTATCTACAACTGCTTCTCTTTCCCCTCCAGGACTGCACAACTTAATGCAATCCAAGACTTCTTTATAATTGAACCAATTGCTTGAAGATTACCTAGTAGTAGTGTAGTTATAGTCCTTAAATCTGTTTTGTCCTTCGGGCTTAAATTTGGGCACATTCATTCTTGACTTAGAAAAGATTCTCAGGTTGAGAAATTGGAGGCAGAGGTATCTGAGTTGCGAAAGTCCTTTGCAGACAAGCAAGAGCAAGAGCAGGCAATGCTTCAGGTTCTATCTTACAGCTTAGTATGCCTGTGCTTTATGCCATCTGGTTGGCTAAAATATATACATATTTACATATGCCTGCAGGTTTTGATAAGAATGGAGCAGGAACAGAAAGTGGCAGAAGATGCCCGCATAGCTGCTGAGAGAGATGCTGCTGATAAGAAATATGCTGCTCAGTTGCTCCAGGTTGCTTCAAGATGTTCTCTCAAACTGCTAGTTTTACACGTACAATTTGTAATTTCTGTAAAAAGGGAGTTGCATAACCTTTTTGTTCCTCGTACATTCAGGAGAAGTATGACGCAGCGATGGCAGCACTTCGACAAATGGAGAAGAGAGCTGTAATGGCCGAAACTATGTTGGAAGCTACAAAGCAGTACCAGGCAGGGCAGTTTAAGGCCAACCAGTCCTTCAATCCAAGGTATGTTTAAACTCCTATGCTATATGTCCAGTATCATGGATGAGTTCTGATCAAATGATAATTATTAATTAAGTAAATTTCATAAAACACACTTATTATGGTATAAGTTGCACAAAACCACAGGAATTTCGGAATGTGGCACATAATCCCAGGTATTTATGGTCCTAAAGTTTTACAAAACCACACATTAAGCATTTAGGGAGCAGTGGGCATGACTAATTTGCTTTTGTTGCATCGTATCATACTTGCTAGTGGTGATGCTTCAGATAGTTCCTTTTCGTTTTCTCAGTACTCCATTCATTTATTAACATAAATCATCCTTAGCTACAAATGACATATTACTGATGTTTCTTGTTGGTTTTTAACATTCAACTTTCTAACACTGTCTTTGCATGGTGACACTTCGTTTACTCGGGATTCTTTTGTAGTTCACCTCGTGCTGCCCCTCAGTCTGGGAAGCCAAATCAAGATCCTAACCAGGATGCACCTAACAGGAGATTGGGCTTGCTTTCTAGGGGCCTTGGTTGGCTAGAGAAAAGCAAGGTACCTTGATTTGTTTAATGCTTCAAGATACGACTTAATTTGAGTAAAAAAAAAGGGGATATCCTCTTTATTTCATATTTGGAAAAGAAAAAAAATATTAACATCATGATGAGCCAAATGGCTCTAGGAAGATGATACAAACTTGAGGTACAATTGTTCATTAACTTTGATTTTTTTTTTATCAGGGAAAGTCTAGTTCCACTGAAACACCTGAAGGCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012365