BGIOSGA012378

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Revision as of 09:46, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012378| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012378, complete gene.| tag = OS03G02...")
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Gene Name

BGIOSGA012378

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012378, complete gene.

LocusTag

OS03G0287700

Ensembl Transcript ID

BGIOSGA012378-TA

Ensembl Protein ID

BGIOSGA012378-PA

Length

5747

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:10832668..10838414

Sequence Coding Region

10832668..10832849,10833580..10835029,10835584..10835773,10837828..10838414

Genome Context

<gbrowseImage1> name=IndicaChromosome03:10832668..10838414 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:10832668..10838414 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCCAAGTTGGATCCGCCCCTGGCTTACTCTGCGAGTCACCCCTTTCATTTTCTTCTGCACCAACCAGGCTTGCGCACTTGCACACAACTGTATTTGTGGACACCAAGATCAAACCTTGGGGTGGAGACATCCTTTCATTTAGCATACTGGAGTACTTGTTAAGGGAGAAAAATGATAGGCCACGAAGAAATAACAGCCCAACCAAAATTCTTGTTGGGAAGGATCTATTGAAGGAATTGGAGCACAGGAGATCGTCACCTAGTGTGATTGCAAAACTGATGGGAATTGATGTATTGCCACCTGCTTATGTAACCCACAATCGGCACCAAGATTTCAAGGACGTCTTTGAAGTGTCAGAAGAACCACAGGAGGCTATCGTGAAAGAGAGGTCCCATCATTTCCCTAAAGGATTGCCAAGCTTGAAACGAAGTGCATTAAAGTTAAAGAAGCTTATGCCATCGATGTCTCCCTATGGCGATGGACCATTCGATAACAATGTAGTGTGCCGAGATGGCTTTGATCGCCTAAACTCGCTAGAGATAAACAATCCTTTGTTTGAGAAGCGCCCCCATGACATGAATTATTCCGCAAAGCATCAATATGAGAAAGAGACTTCAAGTACTTTCAGGAAGTACCCTGCTGGCTTAGGTAATACTTCACTTAAAGATATTAGAAATTCATCAAGAGGAAAGCTTGAAGATTTCAATAGCATTGTTGTTTTGGAGCCAGGCTTAGGGAAAGTCCAAGAGTCGGGGAAAGCCTTTTGTACGCCAGACCCCTCTCACATCAATAAGAATTTCAGGAGAGAGATGCAGCAGGCTGATTTTTCTATGCAGAATAGAGGGAGGGTTTCACCAAATCTTTTAGACACTGAAGATGTTGATGTGTCTAGAATAAAACGAGAAAGATACTTGAGTAGGAATGCCGTAGATTCACTGTTAGAAGGAAAGGAGTCATCATTTGATCATCATAACGTACCGGATACGAGTAGTTCTGGTTCATCTCAGAACTGTGTTAGTGGTGAAGTTAACTCCAGACAAAGCAACAGGCCATCATCAAATAGCTCACCCAGGAAAAACCGTCAGAAGTATGAGGAAGGCAGTGTTGGTTCGAAAACTCTTGCAGAGATGTTTGCCTTATCTGATTCAGAGAGGCTAAAGAGAGATTCCGACTCACATGCGCAGATTCGACACAATAAACTTAACCGGGGCAACAGCAATGGCAAGGAAGGATGCTTCATAGTTTTGCCAAAGCATGCACCTCGATTGCATCCTCACAGTTCATTGGACAAGAATTCCCCTCACAGTAATTTTATCCCAAATACATCAAATACTTACCACAGTGGTCAGTCTCACTTCAACTCTTTCTGCGATATATCAAGACTGCAGCAAATTGGAAGTCCCAGCCAAGATAACTTGAGGAATGCTTGTGCGAAACATCAGACCTTGCGGCAACATAGATCTGCTTCCCCTTCTCATGATAATCAAAACCATTCGCGGTGTTCAACTGACAACTTTTCAACGTTTGACTGCATAAATGAGAAAATATTGTTCACAACAGATGAGGACTTGGTGAAAAAACCTGCTGAAACTGTACATTCTTCATTTGAATCATGTGGGGAAGAAAAGGTTTCAGCATCTCCTTTCAATTGCCGTGATTATGAATCAATAACTGTTTCTGATCATAGTTATGTGGCAAAGTCTCATAAAAGCTTGAAAGAGGTTGGGCAACCAAGCCCAGTGTCCATTCTTGAGCCTCCAACTGATGAAGACAGTTGTTGTTCCGGATACTTCAAGTGTAACTTACAAGACATGCCTAATGTCGAGAAACTAATAGATGACTGTGAGCTCCGATATGAACAAGTATCCTTGTCAAGTGATGATGACAGTGGTTCTTCTTACCGGTCTCTGGAAGCTTTTCAGGTTGAGGAGGAAAGGGGCTTCTCGTATCTCCTTGACATGCTTATAAACTCTGGTATGATAGTCGCTGACTCACAGCTCTTGTGCAAGTCATGGCACTCGCCTGGTTGCCCTGTTGGACCTCAGGTCTTCGACAGGCTTGAGAGGAAGTACAATAAGATATCTGCATGGCCAAGACCAGAAAGGAGGCTTCTGTTTGATCTTGCAAATACTGTTCTTTCTGAGATCCTTGCACCATGGAAATCCAGTAGACGGTGTTGTCCTGTTTGGGGCCCTGAAGGGCCTGTTGAGGTGGTTTGGCAAACAATGGTCAGGCGGCAGGAAGAGCTTGCAGTAGGACATCCTGATAACAAAGTTCTTGATCCAGAATGGCTGGAAGTTGGTGAGGACATCAATACGGTGGGAAAGCAGATAGCCAAGATGTTACATGGTGATCTCTTGGATGAAATTATATTGGAGTTCCTCTCAGGATGTGTTGCTTCATGA</cdnaseq>

Protein Sequence

<aaseq>MSQVGSAPGLLCESPLSFSSAPTRLAHLHTTVFVDTKIKPWGGDILSFSILEYLLREKNDRPRRNNSPTKILVGKDLLKELEHRRSSPSVIAKLMGIDVLPPAYVTHNRHQDFKDVFEVSEEPQEAIVKERSHHFPKGLPSLKRSALKLKKLMPSMSPYGDGPFDNNVVCRDGFDRLNSLEINNPLFEKRPHDMNYSAKHQYEKETSSTFRKYPAGLGNTSLKDIRNSSRGKLEDFNSIVVLEPGLGKVQESGKAFCTPDPSHINKNFRREMQQADFSMQNRGRVSPNLLDTEDVDVSRIKRERYLSRNAVDSLLEGKESSFDHHNVPDTSSSGSSQNCVSGEVNSRQSNRPSSNSSPRKNRQKYEEGSVGSKTLAEMFALSDSERLKRDSDSHAQIRHNKLNRGNSNGKEGCFIVLPKHAPRLHPHSSLDKNSPHSNFIPNTSNTYHSGQSHFNSFCDISRLQQIGSPSQDNLRNACAKHQTLRQHRSASPSHDNQNHSRCSTDNFSTFDCINEKILFTTDEDLVKKPAETVHSSFESCGEEKVSASPFNCRDYESITVSDHSYVAKSHKSLKEVGQPSPVSILEPPTDEDSCCSGYFKCNLQDMPNVEKLIDDCELRYEQVSLSSDDDSGSSYRSLEAFQVEEERGFSYLLDMLINSGMIVADSQLLCKSWHSPGCPVGPQVFDRLERKYNKISAWPRPERRLLFDLANTVLSEILAPWKSSRRCCPVWGPEGPVEVVWQTMVRRQEELAVGHPDNKVLDPEWLEVGEDINTVGKQIAKMLHGDLLDEIILEFLSGCVAS</aaseq>

Gene Sequence

<dnaseqindica>1..182#913..2362#2917..3106#5161..5747#ATGTCCCAAGTTGGATCCGCCCCTGGCTTACTCTGCGAGTCACCCCTTTCATTTTCTTCTGCACCAACCAGGCTTGCGCACTTGCACACAACTGTATTTGTGGACACCAAGATCAAACCTTGGGGTGGAGACATCCTTTCATTTAGCATACTGGAGTACTTGTTAAGGGAGAAAAATGATAGGTTTGTAAACAAGTATAAATTTGAGGAAATGCCACAGGAAGGATCATTTTTTTTTTGTTAAATTTATTGGGCTTTTCTTGATGCGCCTCCACTTACTTTTGAGATTCTACAGGACAGACTGCTCGGCTCCTCGAGTCTATTAGTAGCGGGAATCGCAAGCTGTCCTTGTTTGAGCCATCACATATAGTTCATAATGGAAAATACACCATATGCAGGCTTGCTGCATTTTTAGTGTTGTGTTAATCAGCCTGCTCTCATGTTCATCACTTCATCCTGACCAGCAGCTGTTGGGTCTTTTTTTTTTCCTCTCAACTTGTTCCACATAGTTGATAGGCCGAGCACCACCCCTACAATACCAGTGCAACCTAAGTCAACTCATATATTGGAGAACTGAGTGACATTGTACTAAACCATCTACTTTGAGTGGCGTTGTGCTGATTTTCTATCTGCTCTACATAGAACTAACATAACTTTACAAATGTTCTGTGGATATATGTAGGCATAAAGCACTTCACCTGAGATGATGTAGCAACCTTTCATCTCAACTGATTCTCTATACAGTAATCTTCAAGATGGAACAGATTTCAGTGAGTTAATTCCTTCTGTTCATTGTATTGTTCTTCAAATCAGTTACCTTATGACCAAAAGTCAAAAGTTAAGATTGAGAAATATGCTTCCTTTTTTGTTTTGGACAACTTCTATAGCTTGGGCATCGGTACAAGGAGTGCAGGCCACGAAGAAATAACAGCCCAACCAAAATTCTTGTTGGGAAGGATCTATTGAAGGAATTGGAGCACAGGAGATCGTCACCTAGTGTGATTGCAAAACTGATGGGAATTGATGTATTGCCACCTGCTTATGTAACCCACAATCGGCACCAAGATTTCAAGGACGTCTTTGAAGTGTCAGAAGAACCACAGGAGGCTATCGTGAAAGAGAGGTCCCATCATTTCCCTAAAGGATTGCCAAGCTTGAAACGAAGTGCATTAAAGTTAAAGAAGCTTATGCCATCGATGTCTCCCTATGGCGATGGACCATTCGATAACAATGTAGTGTGCCGAGATGGCTTTGATCGCCTAAACTCGCTAGAGATAAACAATCCTTTGTTTGAGAAGCGCCCCCATGACATGAATTATTCCGCAAAGCATCAATATGAGAAAGAGACTTCAAGTACTTTCAGGAAGTACCCTGCTGGCTTAGGTAATACTTCACTTAAAGATATTAGAAATTCATCAAGAGGAAAGCTTGAAGATTTCAATAGCATTGTTGTTTTGGAGCCAGGCTTAGGGAAAGTCCAAGAGTCGGGGAAAGCCTTTTGTACGCCAGACCCCTCTCACATCAATAAGAATTTCAGGAGAGAGATGCAGCAGGCTGATTTTTCTATGCAGAATAGAGGGAGGGTTTCACCAAATCTTTTAGACACTGAAGATGTTGATGTGTCTAGAATAAAACGAGAAAGATACTTGAGTAGGAATGCCGTAGATTCACTGTTAGAAGGAAAGGAGTCATCATTTGATCATCATAACGTACCGGATACGAGTAGTTCTGGTTCATCTCAGAACTGTGTTAGTGGTGAAGTTAACTCCAGACAAAGCAACAGGCCATCATCAAATAGCTCACCCAGGAAAAACCGTCAGAAGTATGAGGAAGGCAGTGTTGGTTCGAAAACTCTTGCAGAGATGTTTGCCTTATCTGATTCAGAGAGGCTAAAGAGAGATTCCGACTCACATGCGCAGATTCGACACAATAAACTTAACCGGGGCAACAGCAATGGCAAGGAAGGATGCTTCATAGTTTTGCCAAAGCATGCACCTCGATTGCATCCTCACAGTTCATTGGACAAGAATTCCCCTCACAGTAATTTTATCCCAAATACATCAAATACTTACCACAGTGGTCAGTCTCACTTCAACTCTTTCTGCGATATATCAAGACTGCAGCAAATTGGAAGTCCCAGCCAAGATAACTTGAGGAATGCTTGTGCGAAACATCAGACCTTGCGGCAACATAGATCTGCTTCCCCTTCTCATGATAATCAAAACCATTCGCGGTGTTCAACTGACAACTTTTCAACGTTTGACTGCATAAATGAGAAAATATTGTTCACAACAGATGAGGACTTGGTGAAAAAACCTGCTGAAACTGTACATTCTTCATTTGAATCATGTGGGGAAGAAAAGGTCAGTAGGCCCTTATATTAACAACTTCTGTAATTCAAAACAGAAACAGAGTTAATTGAGGAAATTTGCTCAAATGTTGCATACTGTGAACATGAATTTCTAAATGATGCAGTTCTCTACTACAAAGTTAAGAAACTTAAATGTTTCAATTACTGTTCCTGAATCGTATTCTTATTTTATGGTTTTTTGTTTAATGTTTGAGCATTTATTTCTTATATATCTCAAAGTGTTAAGCATTTAAGAAGGTATTCTAATGAGAACCCAGAAATCGAAATTGCTCTTTTCCTTCTTTTTTTGATAATTATATGGAAATAAATCCAGCCTCTAATTGCTCTTTTCCTGATTTTTTTTCTTTGAAAATAGTAGGTTCTCTTTCTTTAGCCTTTTCTTGAGTCCAGAAGTGTACTGTTCCAGTATGTTAGAGTACCTGGTTTATGTAGTACTAGGATGCTTTACTTTGCCTTCATTTATCAATATAATGACGCACTGGGAGAGAATCAATTTTCATGCATTAGTTTCTGGTGTACCACTCACTCAAGTGTTCCCTTTTTTAGGTTTCAGCATCTCCTTTCAATTGCCGTGATTATGAATCAATAACTGTTTCTGATCATAGTTATGTGGCAAAGTCTCATAAAAGCTTGAAAGAGGTTGGGCAACCAAGCCCAGTGTCCATTCTTGAGCCTCCAACTGATGAAGACAGTTGTTGTTCCGGATACTTCAAGTGTAACTTACAAGACATGCCTAGTAAGTGAGACAAACTGGCCCCATTTGGAACACTGGAGTATTCTGTTATTCATAGAGGAATTTACTTGTTTCAAAGAGGTCTGAACTGCATTACCAGCTACCCTAACAATGTAGAAGTTGATACAAATATTTAGGGACAATTGCTTATCTGACCCTATTTCGAAGAATAACTACCAATATGACCCTACTTTTTGTAGTTTGCTTATTTGACCCTGCTTTTCAAAAATGAATCTATTATCTGACCCTATTCCATTAAAGGGAGTTAACGGTGTTAAGTAAGGGGCAAATAGTCCCTTTTGCCCTTGCTTATTTGACCCTTATATCTTGCTTATTTAATTGACACTAAGTCTCCATTTCCACTCTGGCAATCAAAACAAAGAACAAAATCATAATTAAATGTCAATGATATCTTAAAAGTAGTGCAATGAGTATATTTAGTTTATAATAAGCCCTCCTGAGCTATTAAAAATGTGAAGCACCATAACCGTGTGCTGTTTTCAAACAAGTAGAATGGGCGGCCTCAACAGGAATAAGATAACATTTCCAATGACTCACATGACCTTCCGATACTGAACCGGTGACATTTCTTTCAGTTCAGCAACAAATTCACCTATGACAGTAAATTCTGTGTCGCCTGCAACAGAACCCTGCCCTTGATAGGGTCTCACTCTCTGCATCATACTAGTTCAGTGCAGATCCCCTTTGACAATTTTGAGGTCTCACAGCGAAATCTATGAAACTTCTGTTTGGTGGCTGGTGGGGTGCAATCGTCCTTCTCCAAATCTTCAAACAAACTAGATCCAGTAAAAGACCTACAGCCCCTTCTCCTACCAAGTACTTTAGAGCTTGATGTATTACGTGTTGAAGATCCCAGATCTTTTACAATGTTGGCAAAAGGTTTTGACATTTTCCAAATGCTGCTCAAGGGTAACTGGAGATTCATCACGAAGCCTAGAGTTCACTGATGTATTTGAATCATTGTTGATTTGCATACTAGATCCTGCATACCCAGTAATCCCCTATAGAGTTGCTAAAATATTGCCACCTCCGCCGCCTCGCACACCGCAGCACCCCAGTGGAGCCCACCGCAGCCTCCAGCTCGCGGAGCTCCTGGGCGTGAGCGCCGCCCGTGGCGAGGACACGCAAGGCCGCCGGGACGGCGACTAGCCGAACCATCTCGAACCGCGTGCGCCGCGTCTCGACGACGATGGTTGTGAGTCAAGAGAGGCCGGCATCCATGGCGCCGCCGCAAATCGCTCCGTGCCCCGGCGCTGTTGCCGCGCCCTCCCTCCACGAGCCGGCGCTGGCGCGGATCCCTTCCTCTGGGCCCCACCGTCGCCGCCGCCACTCACCAGAAGAGAGACGGGATATGAGAGGAGACCGGATCTGAATGGATAGGGTTTCTTCGAGGGTATTTTGGTCATTATGAAAAGTAAATATATTTATTTTCTTATTTAAAATGAAACCTTAACGGTGCAGTGGAAACAGGGTCAGACGGGATATTCATTTTTGAAAAGCAAGGTCAAAATAAGCAAACTAGAAAAAGTAGGGTCAAATTGGTAGTTACACTTTAAAATAGGGTTAAATAAGCAATTGTCCCAAATATGCAAATATTTATGAACTCAAGCTAAACCATCACTATAGCACCTGACTGGAGCATCATGCGTAATTAGCATACACTAAAAAGGCATTTGCTGTCTAGCAATCATGACTAGTTAACTAACTAATGGCCGGTTTCTTTTGCAAGTCACTAAGCTAAAAGCTACAAATTTGAAAATTCATCCTTTTAGTCTAACTTTTCAATCATCCAGCTGAAGGCACAACATGCTATGAAATGTTTATTGCCCTCTAATCAATGAACTTTCAGAGCACTAAACTGATAGTAAAGTTTAGTTAAAAGTTTGAATCAAAACTTTTAAAGTTCTTGTTTGTGTTTCAAAATTTTAAGTTGAGAGTTTCACTTGGAATGTTCAATGCTGGATTAACCATTTAATATTTGGAAATATTCAGATTGAGTCTGCTTAAAATAACTGAATCTTCTGTGTTGACCTCAGATGTCGAGAAACTAATAGATGACTGTGAGCTCCGATATGAACAAGTATCCTTGTCAAGTGATGATGACAGTGGTTCTTCTTACCGGTCTCTGGAAGCTTTTCAGGTTGAGGAGGAAAGGGGCTTCTCGTATCTCCTTGACATGCTTATAAACTCTGGTATGATAGTCGCTGACTCACAGCTCTTGTGCAAGTCATGGCACTCGCCTGGTTGCCCTGTTGGACCTCAGGTCTTCGACAGGCTTGAGAGGAAGTACAATAAGATATCTGCATGGCCAAGACCAGAAAGGAGGCTTCTGTTTGATCTTGCAAATACTGTTCTTTCTGAGATCCTTGCACCATGGAAATCCAGTAGACGGTGTTGTCCTGTTTGGGGCCCTGAAGGGCCTGTTGAGGTGGTTTGGCAAACAATGGTCAGGCGGCAGGAAGAGCTTGCAGTAGGACATCCTGATAACAAAGTTCTTGATCCAGAATGGCTGGAAGTTGGTGAGGACATCAATACGGTGGGAAAGCAGATAGCCAAGATGTTACATGGTGATCTCTTGGATGAAATTATATTGGAGTTCCTCTCAGGATGTGTTGCTTCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012378