BGIOSGA012383

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Revision as of 09:46, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012383| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012383, complete gene.| tag = OsI_110...")
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Gene Name

BGIOSGA012383

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012383, complete gene.

LocusTag

OsI_11092

Ensembl Transcript ID

BGIOSGA012383-TA

Ensembl Protein ID

BGIOSGA012383-PA

Length

5181

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:10901770..10906950

Sequence Coding Region

10901770..10901911,10902003..10902072,10902217..10902244,10902596..10902642,10902754..10902844
,10903126..10903303,10904014..10904101,10904176..10904257,10904583..10904658
,10904817..10904884,10905011..10905080,10905848..10905932,10906050..10906143
,10906684..10906950

Genome Context

<gbrowseImage1> name=IndicaChromosome03:10901770..10906950 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:10901770..10906950 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACTGACGCCGCCGCCCCCGCCGCCGCCGGAGAAATTCCGGCGGAAGATGCCCCGCCGCCAGGGGCGCTCTACTCGTTCGGGACGCCATGGCCGGAGTTCAACGAAGGGATCTCCTACATCGACACGTTCCGATGCGCCGATGCAGGCGCCACCACGACTTTGATCGAGTTCTACTCCACCAGCTACAAGAGCTCCGCGCCATTGCCAGGGTGGATTAAGAGGATTCGTGATGGACAGATAACAGTATGTGGTGAAGTTGCCACTGATCCAGATATAATTCTCAGGGAGGGTTCTAAGTTGGTATATCATCGCTTACCATGGCAGGAGCCCTGCGCACCACATTTACTTGATGTGCTTTATGAGGATGATGACATGATAGCCCTTAATAAGCCTTCTGGCTTGCAAGTTCTTCCTAAAGGACTTTTCCAACAGCGTACTGTTTTAGCGCAACTTCAATTGAAAGACTGGAAGATGCCTTCATCATTCTGCTCAAAGCGAAAAGATGCGCAATCACACCCTGTACCTGTTCATAGACTCGGAAGGGGCACATCAGGTTTACTGCTTTGTGCAAAAACAAAGCTTGCCAAAGCTCAGCTTGCAGCTTATTTTGCTGAAGGCGCTACAAACGCTGGAAAGAGCAGGGATGAAACAGATATTTGCAAAGCGCGGAAAATTTCAAAGTTCTATCGAGCACTAGTAACTGGTATCCTTGAAAATGATGAGGTTATGATTACCCAACCTATAGGATTAGTTCGTTATCCTGGTGTCGCGGAGGGGCTTTATGCAGCATGTTCCTCAGGGAAACCAGCAATGAGCAAAGTGCGTGTTCTTGAGAGACTTAAAATCCATAATCATACATTGATCCAGGTTGAAATTCATTCAGGACGCCCACACCAAATTAGGATACACCTTGCATACATTGGGCATCCTCTTGTAGATGACCCTCTATATGGCATTGGTGGTCAGCCAAAATTTGATGAACCAGAACCTACTAGTACAGCTGATTCTTTTGCATATGATGGAGGTTATGAGAGACCTTTGCAACCTGTCCCTGGAGATTGTGGGTACCACCTACATGCACATTGGCTAGTTCTTTGTCATCCAACTACAAATGAGCTCCTCTGCCACATATCCTACAGACTAGAGAGGAACAGCAAGATACAGCTAAGCTACTCGGTGGTTGAACCCTTCAATTTTCCTGGTCAGCTTGAGTTCACAGGCTCCAGTGAAGCAGGGCACCCTATACAACAAAAAAACCAAGTGAAAACTTCAGGTTCTGTACTGGGCAATGGCCATCTATTGCTGCAAAACCCATGGAGATGGACGCCGATTGATACTCCTGTCCACCTGTGGGTGCGTGCTTTGCGACTAGCTAACCACTGA</cdnaseq>

Protein Sequence

<aaseq>MTDAAAPAAAGEIPAEDAPPPGALYSFGTPWPEFNEGISYIDTFRCADAGATTTLIEFYSTSYKSSAPLPGWIKRIRDGQITVCGEVATDPDIILREGSKLVYHRLPWQEPCAPHLLDVLYEDDDMIALNKPSGLQVLPKGLFQQRTVLAQLQLKDWKMPSSFCSKRKDAQSHPVPVHRLGRGTSGLLLCAKTKLAKAQLAAYFAEGATNAGKSRDETDICKARKISKFYRALVTGILENDEVMITQPIGLVRYPGVAEGLYAACSSGKPAMSKVRVLERLKIHNHTLIQVEIHSGRPHQIRIHLAYIGHPLVDDPLYGIGGQPKFDEPEPTSTADSFAYDGGYERPLQPVPGDCGYHLHAHWLVLCHPTTNELLCHISYRLERNSKIQLSYSVVEPFNFPGQLEFTGSSEAGHPIQQKNQVKTSGSVLGNGHLLLQNPWRWTPIDTPVHLWVRALRLANH</aaseq>

Gene Sequence

<dnaseqindica>1..142#234..303#448..475#827..873#985..1075#1357..1534#2245..2332#2407..2488#2814..2889#3048..3115#3242..3311#4079..4163#4281..4374#4915..5181#ATGACTGACGCCGCCGCCCCCGCCGCCGCCGGAGAAATTCCGGCGGAAGATGCCCCGCCGCCAGGGGCGCTCTACTCGTTCGGGACGCCATGGCCGGAGTTCAACGAAGGGATCTCCTACATCGACACGTTCCGATGCGCCGGTTCGCTTCTCCTGCTCGCCCGCCTTCTTCAGCGTTTCTCTGCCTCCGCCCTCTTCCTTCGCTTCTTCTGATTTCTTTCATGTACAAGTAGATGCAGGCGCCACCACGACTTTGATCGAGTTCTACTCCACCAGCTACAAGAGCTCCGCGCCATTGCCAGGGTAACGAGCACGCTTTTCCCCAAATCTCCGTGATCAGATGGTGGCCAGTTGGCCACTGCGGCTAGCCGTTTCATTTCCCTTCAGTGAATCTGATTTCACTTGGGATATAGTGCTGATTTGATGTTGTATTGTTGCGCTTTGCAGGTGGATTAAGAGGATTCGTGATGGACAGGTAGGTCATCTAGTAAAATAGCCAGTACTAGTTTGCTCATGTGTTCTCTTTTTTGTATTATGTTCTAAATAATTTGGCTGAGTTAGCATTACTAACAAGCAGAAGTTTTTCATTTCTATCTTTGTCTTTCTATATACATAATTCCTTTAGTTTTACAGTGAACATGCATCTATTTGCTATGGCTCACCAACTTTTATGGTCCTCTTAAAGATATTGTGTGTTTTTATACACATGCTTATATGAGCATTCATTTAATTAACATGTATAGGCAAATGAGAAAGTTTTGGACTATTAGGCTAGATATTTTCCCAACTACGACCAGAGGCTGAAGCTTTGCTTTTTTGTTTGCAGATAACAGTATGTGGTGAAGTTGCCACTGATCCAGATATAATTCTCAGGTAGCTCTATCCACTGATTGTACTGTCATAGTTATCTTGCTTAATTTTTTGGGCAACACATTGTTTCCTTCATAAATGAAGACCATGATGCTATGATGCTCTATTTTACAGGGAGGGTTCTAAGTTGGTATATCATCGCTTACCATGGCAGGAGCCCTGCGCACCACATTTACTTGATGTGCTTTATGAGGATGATGACATGGTATGTAAAATGAAAATAATATCCTTGCTAAGTATGTGTGGCAAACTTTTAGGACATTTCTTTCCATCTTTCGGCGTTTTAACAATCCTAGCTGATTCGCAAGTTTGAAATTTAAAATACTGTATGGTTTTGGCATACAAAACAAGAATAAGATTACTTGTCTATGGTTTGTAAAATGAAAATGTTAGACCTCAGAGTTTTAATACCTTGGTCTACTTGTGAAGAGCCAACATCACCAATCATGCATAAAAGTAATCTTTACTCATTCCTAATTTTTTCAGATAGCCCTTAATAAGCCTTCTGGCTTGCAAGTTCTTCCTAAAGGACTTTTCCAACAGCGTACTGTTTTAGCGCAACTTCAATTGAAAGACTGGAAGATGCCTTCATCATTCTGCTCAAAGCGAAAAGATGCGCAATCACACCCTGTACCTGTTCATAGACTCGGAAGGGGCACATCAGGTTTGTTCCTCTGTTTTTGTTCTGTTCATGCTCAGAAACCTTGGAGCATTGACACCCAGTTGAGTTCCAGTGGATGTAAATTTTTGTTCACCGACCATCAATCAGTCAAACTAGTGGTCTAGTCTAAAATTTATAAATTGTTCCTGGGCATTAAAGCCAATTCGCTTCGACACCAAACTAGTTTCTCAGAAGAGACTGAACCATATGATATAAACATAAAGTGCTGCTCATAGGACTTGTTCCTCTAATATTATAAACAACACTTCTGCAGTGAAATGTGAATTGCAGAAAGATGTTTGTTCACTACTGAGAATCAGCACAACTGCACAAGCTCGTATGATTTCCTTTTTTTTCTTCGTTTCGTTCTAGCTTTGGGTAAAATCCATAATCCCCACTCCCTCGTTTGCATATCTTTCCAGTTTGATGTTTCAGGCTCAAATCATGTAGTTTAAGCACTGCAGTCACTGAAATAATTGAAAAAAGTATTCGTATCAATGAAACATGCACTGAATAACAACATAATTAAGAAATAGCATGAACATGTGTCATGAGGTGGAAACTGCATACTTAACCTGTAGCAAATTTTGCTTAAATAGAAAATGAGATAAGTGAGACAAAATGAAACAGCAGGTGACTTATCAGGAGTTTATGGATTTTTCACTTTACCTTTTGATGACTTTCTATCTCACAATCTATGTGTTGTATCCTAGGTTTACTGCTTTGTGCAAAAACAAAGCTTGCCAAAGCTCAGCTTGCAGCTTATTTTGCTGAAGGCGCTACAAACGCTGGAAAGAGCAGGTATAAAACTACTCTTTTTCATAATTCGAAAAAAAATTCTTGCTATTTTTTCATCTTGTTTAAGATATTTATAGGGATGAAACAGATATTTGCAAAGCGCGGAAAATTTCAAAGTTCTATCGAGCACTAGTAACTGGTATCCTTGAAAATGATGAGGTATTGACCTTCCCCCCTCATTTTTGTTATGGGAAATTTATTGTTTGCTATTACTTAGAGGGCATTTCAGCATTTTTTTTTCACCCCTTGTCTATAACACATGGTGCCCTAGGGCCACATAGTCAGTATGCCACTCTAGAGGAGTTGGAAAACGATCAAATTTCCCTAACCACATAATTCCAAATTTCCAATACGTTGAATTCTGTTCTATTCAATATCAAGCTATATTCGCATTTCTTTTGTTTGTGACCATTTGTCCTTCCAGATCAGTCATGTGTAATATTGTTGTTTATATAAGGCATAATTTGTTTCCAATGCCTTGTAGGTTATGATTACCCAACCTATAGGATTAGTTCGTTATCCTGGTGTCGCGGAGGGGCTTTATGCAGCATGTTCCTCAGGTTATTGCACTACCACATTACTGGTCTAACATTGAATTGGCGAAAAGGCCAATAAGGAGTAAAGGATGAGTTTAGTACTTCTGATGATGCAGTTCATACTGAGGAAAGCATAATCATTATTTCATATGCATTATTTTTTGGACTGTTTTTTTTTTCAGGGAAACCAGCAATGAGCAAAGTGCGTGTTCTTGAGAGACTTAAAATCCATAATCATACATTGATCCAGGTAATATATTACTTTCTTTTTTGAAACATATGTAGCACTATCCATGTTGGTCGATTGCATATGCCATGACAAAATATTGCATTTTTCTGTGTCATCATCTGATATTTGTTTCGTTGATTGATGTAGGTTGAAATTCATTCAGGACGCCCACACCAAATTAGGATACACCTTGCATACATTGGGCATCCTCTTGTAGGTAACTCTCTTGCTCGAGTAATTTTACGGTCCTTGAGGAGGTACCTCATAGAATTGCTCCTCTTGCTCACTGAGTTGCTGTTGGAAAGTCCGCCATGTTGTCAGAAAGGCACATTGTTGGATTACTGCGTCACTCAAAATAGTACTTGCAGCATTGACCTATCATCATCATCATCATCATTATGATAGACACAAATTTATTTAAATAAGAGTAAATTGCATTAGCGGTACATAAACTTGTCAGGTGCGTGCAATTTAGTGTATGAACTTATAAAATGCTTGTTTTGGTGCATGAACTTAACTTGGTACGTGCAAACTAAGACTAAAATGGCGCGGCAAGACCGATTTTTCTATGTTGAACATTATAAATTACAAATTAGTAGATGACTTGCATGTACATAAAGGTTATATTTGTAAACTTAGATTCCACTTTATCTTTCTTTGTTTCTGTCCCTTGCATCATTACTTAGATTTTTATTTTTTTATGCAATCATTATGCCTTATTATATGTTTATCCTTCTTAGACTAATGTTTACATAAAGTTTAAATCAACAACAAAATCAGCAAGATTAACCTTGCAGTGCGATTTTGACCTTGTTCGCATGCACCAAACAAGTTCGTGTACCAAAACGAGCGTTTTACAAGTTCATGTACTAGATTGCACCTACCTGACAAGTTTGTGTACCACCGATGCAATTTACTCTTTAAATAAACATATATGTGAAGGGTTTCTCATGCGATCTTTTCTTTTCTTCAATCCACGAACAGATGACCCTCTATATGGCATTGGTGGTCAGCCAAAATTTGATGAACCAGAACCTACTAGTACAGCTGATTCTTTTGCATATGATGGGTAATTCCTTCATCCTTCATTTTTGCTTAAGGCAGTACGTCTGATGCCTTTGTTTAAGATTTGCATATGAATTCATATCTTTGCATTTAGTTTAACTCACTTTCTTGCTCTTGTTAGAGGTTATGAGAGACCTTTGCAACCTGTCCCTGGAGATTGTGGGTACCACCTACATGCACATTGGCTAGTTCTTTGTCATCCAACTACAAATGAGGTACTGTAAAATGAATCATATTGAATTTGGGTGCTATTCTCTACCTGACTCGTACAATAGCTTTCAATCCCAGGAACTGGGGTTAAATTCATATATCGAAGGTGGGGAAATTACATATTCCGTTGTTTATTGGTGGAAAGACATAATTAGAATATGATAGTAGGGCCCAAATTTGTAGTAGAATAGTGAGCCTCATTAAGTTGCAAGCCTGCAAAATATATTTTCCAAAAAAAGGAAATACAGCTCGCTCCTTCTATTAAAACTTGGGCCTGAATAAAGCAGTTGGGAGGTGATATTCAATATGCTGGACACTGTACGCGCTAAGAATTGGCTATTGTACATCAATATATTCCCGAAGATAATGGTTAACGATAAGCATTCATGTAATTGAGGACTAGCACTTATAAAAGGACAACTCAAGATCCAGAAACCTAAAAGTGACCTTCAATGTTGCGTCCTGACTGGAATCATTGTAATCGCTCTATTCCTTGCTTAGCTTACACTCATCATAATTTTCTTAGCAGATGATCAAAATCACAGCTCCTCTGCCACATATCCTACAGACTAGAGAGGAACAGCAAGATACAGCTAAGCTACTCGGTGGTTGAACCCTTCAATTTTCCTGGTCAGCTTGAGTTCACAGGCTCCAGTGAAGCAGGGCACCCTATACAACAAAAAAACCAAGTGAAAACTTCAGGTTCTGTACTGGGCAATGGCCATCTATTGCTGCAAAACCCATGGAGATGGACGCCGATTGATACTCCTGTCCACCTGTGGGTGCGTGCTTTGCGACTAGCTAACCACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012383