BGIOSGA012401

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Revision as of 09:46, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012401| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012401, complete gene.| tag = OS03G02...")
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Gene Name

BGIOSGA012401

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012401, complete gene.

LocusTag

OS03G0293000

Ensembl Transcript ID

BGIOSGA012401-TA

Ensembl Protein ID

BGIOSGA012401-PA

Length

4281

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:11149122..11153402

Sequence Coding Region

11149122..11149124,11150461..11150516,11150607..11150680,11151355..11151893,11151985..11152326
,11152659..11153018,11153121..11153402

Genome Context

<gbrowseImage1> name=IndicaChromosome03:11149122..11153402 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:11149122..11153402 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTTCTTGGGGTTGACAAGAGTGCCAGCCAACGGGATATTCAGAAAGCGTTTCACAAGCTTTCTCTAAAATATCATCCAGACAAGAATAAAAGCAAGGGGGCGCAGGAAAAATTTGCGGAAATAAACAATGCATATGACATTCTGTCTGATGAAGAGAAGAGGAAAAATTATGATCTCTATGGAGATGAAAAGGGTAACCCAGGATTTGATGGTGGAAATTTTGGAAATCGTGAGGGCTACACATACTTCACTGGTGGTGGCGCCAAGACTAGCCATTTCTCATCTGGTGATGGATGGCAAACGATGGGCGGCCAGGGAAATACAAAAACATTTTCCTTTTCATTTGGTGGTGGTAACCCTGGTGCCGGTGGAGGAAACCCATTTAACTTTGATTTTGGTGATGTTTTTTCCAACATATTTTCTGGTGGATCAATGGGAGGTAGTCAGCATACTGGATCTGCTGGCAAAGCCAGACGTGGTACAAAATCTTCTGGTCATGATTCTAGTTCTGTCAACATTCAGGAGGTCACGATGCAAATTTTCAATAAAGAAACAGCTGATCAAGGAATCACTTGGCTTTTGTTATTCTATACACCAAACACAAAAGGTCAATTTGTGCTAGAAAGTGTCGTGGAGGATGTAGCTCGTTCACTGGATGGTGCACTGAGGGCTGGTAAGGTAAACTGCGACCATGAAAAGGCACTTTGCAAGAAGGCTGGTGTCTCAATAGGAAAATCAGCTCGTCTCTTCATTTATTCATACACAACTACAGAAAAAGGGTCTTTGCATGAGTACTCAGGAGATTATGATTCTAAGAGCCTGAAGACATTTTGTCAAGAACACCTGCCAAGATTTTCCAAAAGGGTAGACATCAACCAATTCAGCTTCCCCTCAAATATCATACCAAACCTTCCTCAAGTGCTCCTACTGTCAGCTAAGAAGGACACACCAGCAATGTGGCGTGCTGTTAGTGGGATGTTCCGCAGTCGATTAATTTTCTATGATGCAGAGGTCCAGGATGTTTCTCATCCACTCCTCAAAAGCCTTGGTGTGAAGAATATTCCAGCTCTAATTGGTAGGTCCGTTAATGGTGAGGAACAACTTCTGAAGGATGGCATTTCAGTGAAAGATCTCAGATCTGGTATCAAAGAATTGAAGAATCTGCTCGAAAATTTTGAGAAGAAGAATAAGAAGCTTGCATCAAACCAAGCTAAGAAACCTGCTCACACAGATCAACCAAAAGAAAACAAAATTCCTCTCCTCACTGCTTCCAACTTTGAGGAGATTTGTGGTGAGAAGACATCAGTATGTATCCTTGGCATTTTCAAATCAAGCAAAGCTAAGGAAAATCTTGAAGCCGTCCTGTCTGAGATATCTCAGAAGACTCTGATAAGGGGGCAGAACTACAACTCTGGGAACACAGTTGCTTATGCTTTGTTGGACGGGAACAAACAGTCCGCCTTCCTGTCCACGTTTGACAAATCAGCATTCAAGTCGTCTGATAAACTTCTCCTTGCCTACAAGCCCCGACGGGGTAGATATGCTGTGTATGACAATGAGGTGACTATGGAAGAGGCTGAAAGGTTCGTGGTTTCTGTTTTGAATGGAGATGTTCAATTGTCTGCAGCCGGACGAAAACCAGTTCTTAGGTAG</cdnaseq>

Protein Sequence

<aaseq>MVLGVDKSASQRDIQKAFHKLSLKYHPDKNKSKGAQEKFAEINNAYDILSDEEKRKNYDLYGDEKGNPGFDGGNFGNREGYTYFTGGGAKTSHFSSGDGWQTMGGQGNTKTFSFSFGGGNPGAGGGNPFNFDFGDVFSNIFSGGSMGGSQHTGSAGKARRGTKSSGHDSSSVNIQEVTMQIFNKETADQGITWLLLFYTPNTKGQFVLESVVEDVARSLDGALRAGKVNCDHEKALCKKAGVSIGKSARLFIYSYTTTEKGSLHEYSGDYDSKSLKTFCQEHLPRFSKRVDINQFSFPSNIIPNLPQVLLLSAKKDTPAMWRAVSGMFRSRLIFYDAEVQDVSHPLLKSLGVKNIPALIGRSVNGEEQLLKDGISVKDLRSGIKELKNLLENFEKKNKKLASNQAKKPAHTDQPKENKIPLLTASNFEEICGEKTSVCILGIFKSSKAKENLEAVLSEISQKTLIRGQNYNSGNTVAYALLDGNKQSAFLSTFDKSAFKSSDKLLLAYKPRRGRYAVYDNEVTMEEAERFVVSVLNGDVQLSAAGRKPVLR</aaseq>

Gene Sequence

<dnaseqindica>1..3#1340..1395#1486..1559#2234..2772#2864..3205#3538..3897#4000..4281#ATGGTAGGTTAATCTCTAGGTAAAATTTGATACATGATATAAAAAAAATATAATTAACTGAGAGACATCACAAAACATGTATATGGAGTAGTAAATAACTGTTGGACACTTGCTGTACTCTCTTAATGGAGATTAGGTTTTTTAAAGGATAAGACAATCTCCACCATTAATCAATATATAAATCAACGGCTCATATTTGTTAAACATATGGGCTGCAATGGGCTAAGAGCAAAGGCTCCATGTAAAGAGAAACTTGACCCAACATCTTCTTGATGTACCAGATAACTTATAATATGAAAAATGGAGGGAGTATAACCCAACTACATAAAATCGTCAACAAGCCATTCAACTATATAATCCGTCAACCGATAAAAATGATTACGTTGAAATAGAACAGACATAACTTGGCTGATAAACTGATGCTGATGCACATGATCATCGGATGACGAACGCATACGCTTACAGGGATCTACTGTTCGAGGGCACACGAAGTCAAACGCTAAACCATCCGGCCTGACGGCCCGAGATCGGACGGTCCTGATTATATCCCCTTTCCACCTCCACGGCACACGGAAGAGGAGGATCGTGGACGAACGCCATCCTACGTGGCACACGGTTCAAAATCAGACACCGCGACGGCCACGCAACGGGCTCGAAAGCTCGCATCCCATTGGTCGAATTCGCTGGAAGCGCGCCCAAGCGACACGTGTACCGGGTTCCCGACCCATCTCGAACCCCGAAGCCACGCCCCACTTCTAAAAACGGCGGCCTCCGGCTCCGTCCATGGCTAAAATCCTCCTTCCTCCTCTTCCCCTCCCCCCGCCGCTTCCCTCCTAACCCGACCAAATTTCACCCGAAGATTCCTTCCGGAGAAGCGAACCCGACCAGAAATTGACCCCCCCTCCCCCCCCCCCTGAGAAAGCTCGATCCGAGGACGAATCAGGCCCCAATCTGCTGAAGCCTAGCGATGGGAATCCTGTCCGATCTCTCCTCGTCGCGTCGATCGTCCTCAGCTCGATCGCCTGCATCTCGCGGCGGCAAAAAACTTGGATCCCTACAAGGTGAGAGACGATAAGCCCCTTCCACCGCCGGTGACGGCAATGTGCAGTTTTCTCTAGCTAAATGTTGTAGGAACTAGGAACCAATTGTGAGGCAGGACTCAGGAGCAGTAGCCACGCAGCCTCGCCAATGTGCAATAGAAGTGATCATGAAAGCATAGTCATTTGAGCCTTCCAATCAATTAGAGTTCACAGCATTAACGCATTTTCCCTTCGACGATAGCATCATTGTCAATTGTCAAATTGTCAGTGATATATTCTGTTCTGTTGTTTTATTTCAGGTTCTTGGGGTTGACAAGAGTGCCAGCCAACGGGATATTCAGAAAGCGTTTCACAAGTATGTGTTCACTTCTTTGAAGAGGATCTGATTTAGTTTCAGATCATATTTTACTGCTTACAAGATTTTTCTAATATCTCATCTCCACAGGCTTTCTCTAAAATATCATCCAGACAAGAATAAAAGCAAGGGGGCGCAGGAAAAATTTGCGGAAATAAACAATGGTAAGACGCTCGACTTAAGTACATTACAGTGCCTGTATTTCAGCTATATTCATTTTGCATTTTTAGATATGTGATGGTGAGAATGAGATAATAATGCATTTAGTATTGCCACCCTGTACTAATAGATGTTAGGCAATGGTGTTATCAAATCTCAAAGCAAGATCATAACGAACCTACCCACGTGTTGGCAAAAGCTTTCTGCATTGTTATGGGTTCGTTTACATGTGCTAATTCTTGCTTTGAACAAGCTAGCTGGCTTGTTACAGTTAATCCTGAGTCTTTTATAAATGTTGTATATTACCTTTTGAATATCTTTAGGTCCAGAAAAGTTATGTAAGCCAACATGTTTGTGGTCAGTGTTTAATTTGCATCTGCTTCATTACAATTTACTTACCACTATTATCAACAAGTTTTCTTTTCTCTTCTTGGTAATAAGTTGCATCCCATTGGTAGGTACAATTGTATAAATTGTTATTATTGTTCTTTCTGTGATATTGAATTATTTTGTCAACAAAGAATATTCCTAGCTGAATTATTCTTCAATAAACAATTATTCTTAGTATTTAGGTGTTTCCTCTCAAAGTAATAAGGGGTACTGGTGTCCCTCTTCAAACTCAAATTGTTCATATCAGTTGGAGTTCTCATTTTAAAAGTGTATTGGTGTTCCTTTGCAGCATATGACATTCTGTCTGATGAAGAGAAGAGGAAAAATTATGATCTCTATGGAGATGAAAAGGGTAACCCAGGATTTGATGGTGGAAATTTTGGAAATCGTGAGGGCTACACATACTTCACTGGTGGTGGCGCCAAGACTAGCCATTTCTCATCTGGTGATGGATGGCAAACGATGGGCGGCCAGGGAAATACAAAAACATTTTCCTTTTCATTTGGTGGTGGTAACCCTGGTGCCGGTGGAGGAAACCCATTTAACTTTGATTTTGGTGATGTTTTTTCCAACATATTTTCTGGTGGATCAATGGGAGGTAGTCAGCATACTGGATCTGCTGGCAAAGCCAGACGTGGTACAAAATCTTCTGGTCATGATTCTAGTTCTGTCAACATTCAGGAGGTCACGATGCAAATTTTCAATAAAGAAACAGCTGATCAAGGAATCACTTGGCTTTTGTTATTCTATACACCAAACACAAAAGGTCAATTTGTGCTAGAAAGTGTCGTGGAGGATGTAGCTCGTTCACTGGATGGTGCACTGAGGGTAAGCTGGTCAAATTTGTGAATGCTGCTCCTTAATGATAGATAAACATATGGAAAGAGCAAACTATATAATAACTCTCTATTCTATGCAGGCTGGTAAGGTAAACTGCGACCATGAAAAGGCACTTTGCAAGAAGGCTGGTGTCTCAATAGGAAAATCAGCTCGTCTCTTCATTTATTCATACACAACTACAGAAAAAGGGTCTTTGCATGAGTACTCAGGAGATTATGATTCTAAGAGCCTGAAGACATTTTGTCAAGAACACCTGCCAAGATTTTCCAAAAGGGTAGACATCAACCAATTCAGCTTCCCCTCAAATATCATACCAAACCTTCCTCAAGTGCTCCTACTGTCAGCTAAGAAGGACACACCAGCAATGTGGCGTGCTGTTAGTGGGATGTTCCGCAGTCGATTAATTTTCTATGATGCAGAGGTATTATATTTTTAACTTATCATCATCTTGTCTCCAGTTGCTTATCAGGTAGAAAAAAATGTCATTGCTGAACATCCTGGTTTTCATGGGAAAGCTGAAGCACAAGTGCCATGCTGTGTTTTATAGGGCCTAACTAACTCGCAATTCCTATGTGGTGTTGACTGTGCTTTGAAAAAAAAATGATAAGGCGCTGATAAATGCTAGTAGTATATAGTTAATCCTATGCTAATATATAATTATAGATTGGTCCATGCAGTGAACGTCATGGCTATGCTAGTACTACGACTATACAGACAATTTAATGTAGTAATATATCATGTTTCTTTGATCAGGTCCAGGATGTTTCTCATCCACTCCTCAAAAGCCTTGGTGTGAAGAATATTCCAGCTCTAATTGGTAGGTCCGTTAATGGTGAGGAACAACTTCTGAAGGATGGCATTTCAGTGAAAGATCTCAGATCTGGTATCAAAGAATTGAAGAATCTGCTCGAAAATTTTGAGAAGAAGAATAAGAAGCTTGCATCAAACCAAGCTAAGAAACCTGCTCACACAGATCAACCAAAAGAAAACAAAATTCCTCTCCTCACTGCTTCCAACTTTGAGGAGATTTGTGGTGAGAAGACATCAGTATGTATCCTTGGCATTTTCAAATCAAGCAAAGCTAAGGAAAATCTTGAAGCCGTCCTGTCTGAGGTTTGTCTCTTCTGTCTTGCTGGTATTTATTTTTCTCTTCTCCTTGCTTGGCCAATTGTTTAATCTTTAATGCGATGTTCCTGCTTGTCAATCCGCATCCAGATATCTCAGAAGACTCTGATAAGGGGGCAGAACTACAACTCTGGGAACACAGTTGCTTATGCTTTGTTGGACGGGAACAAACAGTCCGCCTTCCTGTCCACGTTTGACAAATCAGCATTCAAGTCGTCTGATAAACTTCTCCTTGCCTACAAGCCCCGACGGGGTAGATATGCTGTGTATGACAATGAGGTGACTATGGAAGAGGCTGAAAGGTTCGTGGTTTCTGTTTTGAATGGAGATGTTCAATTGTCTGCAGCCGGACGAAAACCAGTTCTTAGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012401