BGIOSGA012406

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Revision as of 09:46, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012406| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012406, complete gene.| tag = SIP32| ...")
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Gene Name

BGIOSGA012406

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012406, complete gene.

LocusTag

SIP32

Ensembl Transcript ID

BGIOSGA012406-TA

Ensembl Protein ID

BGIOSGA012406-PA

Length

2093

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:11230765..11232857

Sequence Coding Region

11230765..11231379,11231635..11231668,11231876..11232143,11232241..11232352,11232556..11232687
,11232783..11232857

Genome Context

<gbrowseImage1> name=IndicaChromosome03:11230765..11232857 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:11230765..11232857 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATGAGGGAGGGAGATGCATGTGTTGCACTTCTAAGAAGCAAGCTCCATGGCCTTGTCGAGAGGAACCGCAGTCTGGAAGAGGAGAACAAGCAATTGAGACATCAAGTCAGTCGTCTAAAAGGCCAAGTATCCTCCCTTGAAGGCCAGGATACTGATAGAAAGATGCTCTGGAAGAAGCTGGATAATTCTTCCACTGGCAACAGCTACCTCAAGGAAAAGCAGTTTGTTCCCAACAATGATGCAAAGGAAGCCATGGATCTCAACAGCACGTCGTGTTACAGCAGGCAGCAATTCTCCAGGGCACCTCTGGTGAGATCAAGAGCACCAAGGGTTCCAAATCCACCGCCAAGTCCAACCTACACCCAACCAATAGTAAATGCAAGAAAGGAAGGAGGCATGGCTCCTCCTCCACCGCCACCTCCCCTACCTTCCAGATTGCTGAAGAGCACTAAGGCAGTGCAAAGGGTGCCTGATGTAGTCGAGTTATACCGGTTATTGGTTAGAAGAGAAGGCAAAAATGATGCAAAGTCTGGATCCATGGGAATTCCGGCAGCTACTAATAGCCGAGAGATGATAGGGGAGATAGAGAACAAATCAGCTTATGTGTTAGCTTTTGATGATAGCACACAACTCTTTAGTGGTAAAGTGGAGGTAAAGAATGCGGCATACAAAGAAATAGCTGATGTTGAAGAGTTTGTGAAGTGGCTTGATGGGGAACTATCTTACCTTGTGGACGAAAGAGCAGTGCTCAAGCATTTCCCAAACTGGCCAGAGAAGAAAGCAGATACCATGAGAGAAGCAGCATTCACCTACCGAGATCTGAAGAATCTGGAATCAGAAGCATCGTCATTCCACGATGACAGGAGAGTTGCCACACCTATGGCTCTCAAGCGCATGCAAGCTCTGCAGGATAAAATTGAACAAGGTATTCATAATACTGAGCGAGCAAGGGACAGTGCAAGTGGAAGATACAAGGATCTTAAGATCCCGTGGGAATGGATGCTTGACTCTGGAATCATAAGCCAACTAAAGATGGCTTCATTGAAGCTAGCAAGAGAATTCATGAACCGCGTTGTGAATGCACTGAAGTCCGACCCATTCACAAATGACGAAGAACTGCTTCTCCAAGGTGTCCGCTTTGCCTTCCGCATACATCAGCTTGCAGGTGGGTTTGATGAAGGTTGCCGGAAAGCATTCCAAGAACTGAAGATGTATGCAAGCAAGTCAGATTGA</cdnaseq>

Protein Sequence

<aaseq>MMREGDACVALLRSKLHGLVERNRSLEEENKQLRHQVSRLKGQVSSLEGQDTDRKMLWKKLDNSSTGNSYLKEKQFVPNNDAKEAMDLNSTSCYSRQQFSRAPLVRSRAPRVPNPPPSPTYTQPIVNARKEGGMAPPPPPPPLPSRLLKSTKAVQRVPDVVELYRLLVRREGKNDAKSGSMGIPAATNSREMIGEIENKSAYVLAFDDSTQLFSGKVEVKNAAYKEIADVEEFVKWLDGELSYLVDERAVLKHFPNWPEKKADTMREAAFTYRDLKNLESEASSFHDDRRVATPMALKRMQALQDKIEQGIHNTERARDSASGRYKDLKIPWEWMLDSGIISQLKMASLKLAREFMNRVVNALKSDPFTNDEELLLQGVRFAFRIHQLAGGFDEGCRKAFQELKMYASKSD</aaseq>

Gene Sequence

<dnaseqindica>1..615#871..904#1112..1379#1477..1588#1792..1923#2019..2093#ATGATGAGGGAGGGAGATGCATGTGTTGCACTTCTAAGAAGCAAGCTCCATGGCCTTGTCGAGAGGAACCGCAGTCTGGAAGAGGAGAACAAGCAATTGAGACATCAAGTCAGTCGTCTAAAAGGCCAAGTATCCTCCCTTGAAGGCCAGGATACTGATAGAAAGATGCTCTGGAAGAAGCTGGATAATTCTTCCACTGGCAACAGCTACCTCAAGGAAAAGCAGTTTGTTCCCAACAATGATGCAAAGGAAGCCATGGATCTCAACAGCACGTCGTGTTACAGCAGGCAGCAATTCTCCAGGGCACCTCTGGTGAGATCAAGAGCACCAAGGGTTCCAAATCCACCGCCAAGTCCAACCTACACCCAACCAATAGTAAATGCAAGAAAGGAAGGAGGCATGGCTCCTCCTCCACCGCCACCTCCCCTACCTTCCAGATTGCTGAAGAGCACTAAGGCAGTGCAAAGGGTGCCTGATGTAGTCGAGTTATACCGGTTATTGGTTAGAAGAGAAGGCAAAAATGATGCAAAGTCTGGATCCATGGGAATTCCGGCAGCTACTAATAGCCGAGAGATGATAGGGGAGATAGAGAACAAATCAGCTTATGTGTTAGCTGTAAGTACAAATATTATTATTCTAAAAATATGTGCATTTATATTTTTACATATGTGGTGATCCATCGTTTCATCCTTTTCAAATTTAGCATATGCAACAAACATGAGCATGAGAATTGCATAATATTCATTCTGTCTGTTTACCATTCTATAAAAAGAATATAGATAAGAGAGTGCTTTCTAAATATCTTTCCTATTTTAAAAACAATGCAAACCACCTTATTCCATAACATAGTCATCCATCATTCTTTTTCAGTTTGATGATAGCACACAACTCTTTAGTGGTAAAGGTTGCTAGTAATTCGTTTGTTTTGCGGGTGGGGGTAATTCCTTTACAACAAAAGTCTTTTATGTTGGATTCCTCAATTTTTAAGTCAAGCTTTGCTGTCATATTTTCTAGCTAAGCGATTCTTATCTTATATGTGCTGCTTATGATGTCACTACAACAGATTAAATCAGATGTAGAAAATCAGAGTGATTCATTAACTTCCTGGCAGTGGAGGTAAAGAATGCGGCATACAAAGAAATAGCTGATGTTGAAGAGTTTGTGAAGTGGCTTGATGGGGAACTATCTTACCTTGTGGACGAAAGAGCAGTGCTCAAGCATTTCCCAAACTGGCCAGAGAAGAAAGCAGATACCATGAGAGAAGCAGCATTCACCTACCGAGATCTGAAGAATCTGGAATCAGAAGCATCGTCATTCCACGATGACAGGAGAGTTGCCACACCTATGGCTCTCAAGCGCATGCAAGCTCTGCAGGATAAGTGAGTAGATTACAGTGCATTTAACAGAACCAGGAATTGTCGTATTGCTAATATTGAACAAACAACACAGCATGATCCGTGCTTTACTCTGTTATAGAATTGAACAAGGTATTCATAATACTGAGCGAGCAAGGGACAGTGCAAGTGGAAGATACAAGGATCTTAAGATCCCGTGGGAATGGATGCTTGACTCTGGAATCATAAGCCAAGTATGTAATCCATACTTCTAATGACAGCTTTATTCACAGTTAGTAAGCAACCACAGCTTGCTGCATTTTACTAACTTGTCTTCAGTTTGAGCAACCCGGTACACAGAGGAATCTGGTTCCTTACCCTCTAATCACTGATTCCTATTGGTAGACATTTTACTAGTTTCCTTCAGTTTGATGTATACTCTTGCTTTCTTAAACAGCTAAAGATGGCTTCATTGAAGCTAGCAAGAGAATTCATGAACCGCGTTGTGAATGCACTGAAGTCCGACCCATTCACAAATGACGAAGAACTGCTTCTCCAAGGTGTCCGCTTTGCCTTCCGCATACATCAGGTAGTTTCGCCTCAATCATGAATTACTTTGAAATGGTATTGTGTCTTCTTAGCTACAAAAGTGCTAGGTAACTAATTGCAACAAACCAAACACAGCTTGCAGGTGGGTTTGATGAAGGTTGCCGGAAAGCATTCCAAGAACTGAAGATGTATGCAAGCAAGTCAGATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012406