BGIOSGA012430

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Revision as of 09:47, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012430| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012430, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA012430

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012430, complete gene.

LocusTag

OSJNBB0026L04.10

Ensembl Transcript ID

BGIOSGA012430-TA

Ensembl Protein ID

BGIOSGA012430-PA

Length

3230

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:11473800..11477029

Sequence Coding Region

11473800..11474015,11475671..11477029

Genome Context

<gbrowseImage1> name=IndicaChromosome03:11473800..11477029 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:11473800..11477029 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACGCGGGTGAAGGACGTGGCGCGGCGGTCGAGCAAGAAGTACGTCGACGAGGCGCTGTACCGGCGGCTGTTCCGCCGGGGCTCCACGCCGCAGGCCGTGCGGGAGGAGGTGGACGGCTTCCTCGACAGCCGGAAGCGCGCCTTCAAGTGGGAGGTCGGCGTCTGCGTCCGCCGCCTCCGGAAGCAGGCCCTCTACCGCCCCGCCCTCAAGCTTTCTGAAGTCATGGCAAGAAGAGGCATGAATCCTACAGTCAGTGACCAGGCAATCCGCCTTGATCTCGTTGCCAAATCAAGAGGCATTGCTGCTGCTGAGAAGTACTTCCTGGACCTCCCAGAAACTTCCAAAACTCATCTCACATATGGTGCTCTTCTTAACTGTTACTGCAAAGACTTAATGACTGAGAAGGCTGAAGCCCTTATGGGAAAAATGAAGGAACTCAACTTTGCTTTCACTGCCATGTGCTATAACAGCTTAATGACACTATACACGAAAGTCAACCAACATGAGAAGGTCCCTAGTGTCATCCAGGATATGAAAGCCGATGATGTGTTGCCTGATATTTATACCTATAATGTTTGGATGAGGGCGCTTGCAGCTCGTGTAGACATAAAAGGGGTTGAGAGGGTGATTGAAGAGATGAAACGGGATGGTCGTGTTACTCCTGATTGGACAACCTACAGTAACCTGGCTTCTATATATGTTGATGCTGGACTGTTTGAGAAAGCAGAAGCTGCCCTGAAGGAGCTGGAGAAGTGGAACACTAGCAATGATCTTGAAGCATACCAGTTCCTCATTACATTATATGCAAGAACACAAAATTTAGTGGAAGTTCATCGTGTTTGGCGATCATTGAAGCGGAATCAACCAAGAAGGGCAAACATGAGTTACCTTAACATGATTCAAGCCTTGGCAAATTTGAAGGATCTGCCTGGTGCTGAGGCCTGTTTCAAAGAGTGGGAAGCTCAGTACATCAATCCACCTAAGACTAACACAAAGGCCCCTGGGACAGCTGAAACGTCATCTAATGAATCTGATGTCAAGGCAACCAAGGACAAAGGCACAGATGGGGAATTGAAGCATCCTAAATATGATATCCGGGTTGCAAATGCCATGATCAAAGCATATATTACAGAGGGTATGTTTGACAAAGCTGTTGCTGTCAAGAAGCGTGCCAAGATGCGTGGTGGAAGACTTAACGCTAAGACCTGGGAAATTTTCATGGAACATTATCTCAAGGAAGGGGATCTCAAGATGGTTCACTGGTGCGCTGATCGTGCAATCAAGAAAGGGCACAGCGCTGGTAGGATCTGGGTGCCACCACATGAAGTGACTGAAACCTTGATGGATTACTTTGAGAAGAACAAAGATGTAGATGGAGCTGAGAAATTTGTCGAGGTATTAAAGAAGGTACAGAAGGATTTGGGCACGGTGGTGTTTGAACCACTGGTTCGCACGTATGCAGCTGCTGGGAAGAAGCTCCCTGGGATGAGGCACCGCCTTAAGATCGAAAATGTGGAAGTCAGCGAGGAAACCGCCAAGCTGCTTGATTCTGTCTGTATTGATCAATGA</cdnaseq>

Protein Sequence

<aaseq>MATRVKDVARRSSKKYVDEALYRRLFRRGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRLRKQALYRPALKLSEVMARRGMNPTVSDQAIRLDLVAKSRGIAAAEKYFLDLPETSKTHLTYGALLNCYCKDLMTEKAEALMGKMKELNFAFTAMCYNSLMTLYTKVNQHEKVPSVIQDMKADDVLPDIYTYNVWMRALAARVDIKGVERVIEEMKRDGRVTPDWTTYSNLASIYVDAGLFEKAEAALKELEKWNTSNDLEAYQFLITLYARTQNLVEVHRVWRSLKRNQPRRANMSYLNMIQALANLKDLPGAEACFKEWEAQYINPPKTNTKAPGTAETSSNESDVKATKDKGTDGELKHPKYDIRVANAMIKAYITEGMFDKAVAVKKRAKMRGGRLNAKTWEIFMEHYLKEGDLKMVHWCADRAIKKGHSAGRIWVPPHEVTETLMDYFEKNKDVDGAEKFVEVLKKVQKDLGTVVFEPLVRTYAAAGKKLPGMRHRLKIENVEVSEETAKLLDSVCIDQ</aaseq>

Gene Sequence

<dnaseqindica>1..216#1872..3230#ATGGCGACGCGGGTGAAGGACGTGGCGCGGCGGTCGAGCAAGAAGTACGTCGACGAGGCGCTGTACCGGCGGCTGTTCCGCCGGGGCTCCACGCCGCAGGCCGTGCGGGAGGAGGTGGACGGCTTCCTCGACAGCCGGAAGCGCGCCTTCAAGTGGGAGGTCGGCGTCTGCGTCCGCCGCCTCCGGAAGCAGGCCCTCTACCGCCCCGCCCTCAAGGTCAGACCCCGATCTGTTCGCCATTCGTGTGTGGTTGCTAGATCTGACCATGCTGGAAGTATGAAACTGTTTGAGATGTTTATGCGATAGTGTCTCTATCTTGTATATCTTGTGAAGATGGGTTTCTTTATTGCTGCAAATTAAATTTATCCCCCTTTGAGATCAAATATATATCGGTGCGTTTAGTCAGGTGGAATTGTTAGTTCCATTCAGCAAAATGCTGAAATACTTAATTTATTTTGGGAGAAAGAAAACGTGAAATGCTTAATTTGATTATGTGCTAATGTTATCAAATGTTCTGAATGACAATCGAAGTATTTTGTACACGGGTGAAATGGTATCCTAGGTGGCCCATATATATGTTTTAAGCCGAGTTGTTTGGTTGATCATCAGCAGTTCAGCCTTTGTGAAATAGAACTCGACTGTCTACCCATATTAATATGCTGACCTTTGGGTTCGTATTCGCTTCAATTTTTCATAGGTTTCAGTATAGGTTACTGAAATACTACGAGTACTTCTAGATTGCCGCGATCAGATCATACAGTCTGCTTGTAGTTTTGTCTTTCAGGGGTGTACCGTTTTACAGTGAAATGGGGGCATCTCAACAGTATAACTGGCTGGAGACCAATCTGTTTGTTCTTATGTAACAATGAACAGAACTAATGATGTCTCATTATTATTTGCATGCTGCTAAGGATATGGACAGTGGGATAATTAGTTTCTTTCGACACCTGTAGTGCCAGTTTCTTGCCTTCCTAGCAGAATCAGTTTCCTGTTTATGCTTTCCTATTTGTACTGCTTTGTTAGGAAAGAGCAAGAATGCATACTGAAAACTCATTTTCTCTCTTTTCTTATGAGTTAATATTCATCTCTTCTAGAAGTTCTATTTCCCATGTTCAGTTCAATGAATATCACGGTGTCCTATGTTAATCTACGTCATTTAAAATTCCCAACTATTTATCCACGTTGAGCCATCCTATAACAATAATGTGTCGGCTGTGTTCAGTATCTAATGGTAACTTCAACCTTGCAATCTTTTGGCAGTTCTATTTTTACAAGTTCACACACTAATTTGCACTTGGAACACCGTGACTCTTAGCATCTGAATATGTTTGGCACCATTGTAGTGTAAATGATTGTATTTTCTAAATGTTTTAACCTGAAATTGTTTTTGGATTTTTGGTTTGACTGACTGCATCTATTGTTTTTGTTTTTTAGGATTGATTCCTATGCTTTCTTTCTGTGTGAAGTGTATCATTCATGTTTTGGACCATGAATTTTGTATAGAATTATTGCTGTATTGCATTCCCTTATCCACCCTTTTGTATATAACTGATACAAAATTGCACCGAATGTAATTAATGTGTAGCATATACGGTAAAATTATACTAGTTGAAATGAATGATACTATTAATGTTAATATGTATGCGTTTGAACCACTCATGTTATTTTGAAATGCGGAAAATATAGATTGCGTGTTTTCATTCTGATGTATGTTAATTTCAAATGCAGCAAGCAGGGCATATATGCCGAGCTAATTCCATATGAAAAATCACTATTTTTTTTTTACCTGCTTGTGGGTTCTGGATTTGAAATTATACCTCCAAGCTAATGCTAAATATATTTTCTTTTTTTTAAAAAAAATATTTCTGTAGCTTTCTGAAGTCATGGCAAGAAGAGGCATGAATCCTACAGTCAGTGACCAGGCAATCCGCCTTGATCTCGTTGCCAAATCAAGAGGCATTGCTGCTGCTGAGAAGTACTTCCTGGACCTCCCAGAAACTTCCAAAACTCATCTCACATATGGTGCTCTTCTTAACTGTTACTGCAAAGACTTAATGACTGAGAAGGCTGAAGCCCTTATGGGAAAAATGAAGGAACTCAACTTTGCTTTCACTGCCATGTGCTATAACAGCTTAATGACACTATACACGAAAGTCAACCAACATGAGAAGGTCCCTAGTGTCATCCAGGATATGAAAGCCGATGATGTGTTGCCTGATATTTATACCTATAATGTTTGGATGAGGGCGCTTGCAGCTCGTGTAGACATAAAAGGGGTTGAGAGGGTGATTGAAGAGATGAAACGGGATGGTCGTGTTACTCCTGATTGGACAACCTACAGTAACCTGGCTTCTATATATGTTGATGCTGGACTGTTTGAGAAAGCAGAAGCTGCCCTGAAGGAGCTGGAGAAGTGGAACACTAGCAATGATCTTGAAGCATACCAGTTCCTCATTACATTATATGCAAGAACACAAAATTTAGTGGAAGTTCATCGTGTTTGGCGATCATTGAAGCGGAATCAACCAAGAAGGGCAAACATGAGTTACCTTAACATGATTCAAGCCTTGGCAAATTTGAAGGATCTGCCTGGTGCTGAGGCCTGTTTCAAAGAGTGGGAAGCTCAGTACATCAATCCACCTAAGACTAACACAAAGGCCCCTGGGACAGCTGAAACGTCATCTAATGAATCTGATGTCAAGGCAACCAAGGACAAAGGCACAGATGGGGAATTGAAGCATCCTAAATATGATATCCGGGTTGCAAATGCCATGATCAAAGCATATATTACAGAGGGTATGTTTGACAAAGCTGTTGCTGTCAAGAAGCGTGCCAAGATGCGTGGTGGAAGACTTAACGCTAAGACCTGGGAAATTTTCATGGAACATTATCTCAAGGAAGGGGATCTCAAGATGGTTCACTGGTGCGCTGATCGTGCAATCAAGAAAGGGCACAGCGCTGGTAGGATCTGGGTGCCACCACATGAAGTGACTGAAACCTTGATGGATTACTTTGAGAAGAACAAAGATGTAGATGGAGCTGAGAAATTTGTCGAGGTATTAAAGAAGGTACAGAAGGATTTGGGCACGGTGGTGTTTGAACCACTGGTTCGCACGTATGCAGCTGCTGGGAAGAAGCTCCCTGGGATGAGGCACCGCCTTAAGATCGAAAATGTGGAAGTCAGCGAGGAAACCGCCAAGCTGCTTGATTCTGTCTGTATTGATCAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012430