BGIOSGA012434

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Revision as of 09:47, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012434| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012434, complete gene.| tag = OS03G02...")
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Gene Name

BGIOSGA012434

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012434, complete gene.

LocusTag

OS03G0299900

Ensembl Transcript ID

BGIOSGA012434-TA

Ensembl Protein ID

BGIOSGA012434-PA

Length

2998

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:11590151..11593148

Sequence Coding Region

11590151..11590230,11590327..11590415,11590676..11590743,11590854..11590970,11591272..11591334
,11591742..11591846,11591924..11591974,11592149..11592469,11592570..11592776
,11592855..11593148

Genome Context

<gbrowseImage1> name=IndicaChromosome03:11590151..11593148 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:11590151..11593148 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCCTCCCCCGCCGCCGCGGCCGCGGCCGCCACCGTCTCGTCGTTCGTCTCGCCGTCGTCCTTCTCCTCCGTCAAGGCATCGAAGCCCGACCGCCTCCGTCCGGCGAGGAGGGCGGCGGCCGTCAACGTCCGCTGCGTCAGCAGCCCTCCGGCCACCGAAACTTCTTTCAAGACGAAAGTACCACGAAATGCCAATATGGCCAAGCTGCAAGCTGGCTATCTGTTTCCTGAGATTGCCAGGAGAAGGGCAGCTCACCTGCTGAAGTTTCCTGATGCGAAGATTATAAGCCTTGGGATCGGTGACACTACAGAGCCCATTCCAGACGTCATAACTAATGCCATGGCAGAGAGAGCACATGCTTTATCCACAGTTGATGGTTATAGTGGTTATGGAGCTGAACAGGGTGAAAAGAAACTAAGGGCAGCTATTGCTGCAACCTACTATGCGGATCTTGGTATTGAAGAAACAGATATATTCGTCTCTGATGGTGCAAAATGTGACATTTCTCGTCTGCAGGTCCTTTTTGGATCTAATGTGAAGATTGCAGTTCAAGATCCATCATATCCTGCCTATGTTGATTCAAGTGTTATCATGGGGCAAACTGGTTTATATCAGGAGGATGTTCAGAAGTATGGAAATATTGAGTACATGAAATGCAGTCCTGAAAATGGGTTTTTCCCTGATCTGTCAAGTGTTCCACGAACAGATATAATCTTCTTTTGTTCACCCAACAATCCTACTGGTGCTGCTGCATCTCGGGACCAATTAACCAAATTAGTCAAATTTGCAAAGGACAATGGATCCATTATAGTTTATGATTCTGCTTATGCCATGTACATATCAGATGACAGCCCAAAATCTATCTTTGAAATTCCTGGAGCAAAGGAGGTTGCCATTGAAACAGCATCTTTCTCCAAATATGCTGGATTCACTGGTGTGCGTTTGGGTTGGACTGTGGTTCCTAAGGAGCTCCTTTTCTCAGATGGGCATCCTGTTGCTAAAGATTTCAACCGCATAGTCTGCACTTGCTTCAATGGTGCATCAAACATTTCTCAAGCCGGTGGTTTAGGTTGTCTATCTCCAGAGGGTTTAAAGGCCATGAGTGACGTTGTCGGCTTCTACAAGGAAAATACTAAAATTATTGTTGACACATTTACATCACTTGGATTCAACGTCTACGGTGCCAAGAATGCTCCATATGTGTGGGTGCACTTCCCTGGCCGTAATTCTTGGGATGTCTTCGCCGAAATTCTTGAGAAGGCACATGTGGTTACTACTCCTGGTAGCGGATTTGGGCCCGGTGGTGAAGGCTTCGTAAGGGTCAGTGCATTTGGGCACAGAGAGAACATTATTGAAGCTGCGAGAAGACTGAAGCAGCTGTACAAATGA</cdnaseq>

Protein Sequence

<aaseq>MAASPAAAAAAATVSSFVSPSSFSSVKASKPDRLRPARRAAAVNVRCVSSPPATETSFKTKVPRNANMAKLQAGYLFPEIARRRAAHLLKFPDAKIISLGIGDTTEPIPDVITNAMAERAHALSTVDGYSGYGAEQGEKKLRAAIAATYYADLGIEETDIFVSDGAKCDISRLQVLFGSNVKIAVQDPSYPAYVDSSVIMGQTGLYQEDVQKYGNIEYMKCSPENGFFPDLSSVPRTDIIFFCSPNNPTGAAASRDQLTKLVKFAKDNGSIIVYDSAYAMYISDDSPKSIFEIPGAKEVAIETASFSKYAGFTGVRLGWTVVPKELLFSDGHPVAKDFNRIVCTCFNGASNISQAGGLGCLSPEGLKAMSDVVGFYKENTKIIVDTFTSLGFNVYGAKNAPYVWVHFPGRNSWDVFAEILEKAHVVTTPGSGFGPGGEGFVRVSAFGHRENIIEAARRLKQLYK</aaseq>

Gene Sequence

<dnaseqindica>1..80#177..265#526..593#704..820#1122..1184#1592..1696#1774..1824#1999..2319#2420..2626#2705..2998#ATGGCCGCCTCCCCCGCCGCCGCGGCCGCGGCCGCCACCGTCTCGTCGTTCGTCTCGCCGTCGTCCTTCTCCTCCGTCAAGTAATCCAGTCATCTCCGCGCGCGCGCGCGCTCGCGCTTCGTTGATTGATTCGTTGTGCTGTGGTTCTCACTCTGTTTGGGCGTGATTGTTTACAGGGCATCGAAGCCCGACCGCCTCCGTCCGGCGAGGAGGGCGGCGGCCGTCAACGTCCGCTGCGTCAGCAGCCCTCCGGCCACCGAAACTTGTACCGTCCTCTCCCTTTCCCTCTCCCTCTCCCTCTCCCTCCTAGCAACTCATTTATGGTTGCTCCCAAACTGCTCACTGCCGCTTAGTAGGTTTTTGCTATAGTAGTTATCGCTGGAGGTGTGCTATCGAATGCAATGAGCTCGATATTGCCTCCGCTGATGCTATCACACGCAGTTTAGGAACAACCAGAAAGTTACTGATACTATCACTAGCACTGTGGTAGTAAGTTTACTGAAAGATTCAGCTTTCGTTTTGAAGCTTTCAAGACGAAAGTACCACGAAATGCCAATATGGCCAAGCTGCAAGCTGGCTATCTGTTTCCTGAGGTTTGTTTTGTTCCAACCATTTCCTCTCTCTTCTTTCCCTCCCTGTCTTCGTTGATGCTGTTTTATTGAAATTGCATGTTGATATTGGTTCTTTGCCAACTGTGGAGCAGATTGCCAGGAGAAGGGCAGCTCACCTGCTGAAGTTTCCTGATGCGAAGATTATAAGCCTTGGGATCGGTGACACTACAGAGCCCATTCCAGACGTCATAACTAATGCCATGGCAGAGGTACATCGTTGCTCTTAATATAATAAACACCGGTTGTGTAGCTTCAGATGATTTATGTTGCAGTTTGTCAAGATCGTAGCTAAATTTCTTATTGAAAAAAGAAGTTCGGCATTGCATGGCACACAGTTCTTATGGTTCAATGTAAATGATTTTGTCAGACAGGCTGTGCATCTTCCTAGGAGTAAACTAAGAAATCATCATCTTCTTTTCTTTTTTCTTTTTTTTTTTTTGCATTTTTTGTATTATAGTTATTTTTTTTCAAATAAACATTGATCTTTGATGGGTCTATTTGTAAATGCAGAGAGCACATGCTTTATCCACAGTTGATGGTTATAGTGGTTATGGAGCTGAACAGGGTGAAAAGGTATGCTTATCACTTTACTAGCATTTTCTGCCAATACATCAGCATTCAGTTGACAAGATTGTACATAACTATTTTGCTTCATATATGATTTTAAAGTTTGTGTAGAATATTCTAGAATAATTGGAGCAGGATAGATCTTTGTGCTAATCCATGAGGTTCAGTAACACCTTATGGCATCTGCTGGTGTGGTTCATCGAATTAGTTTTTTGAACTATTAACTTCTTGCACTAATAGCTGTCACAAAGATCAAACATCTGCCACATTTTCTTGATGAGTGGATTCTTACTTTTCTTTTACTGCCCCATTCAAATATATTAGTCTTGACATTGCATACATTTCATATAGCTTCACTATCATAAGCCGTTTATGTTCATCATTCTGAAATTATACATTAATTTTCTGCACAGAAACTAAGGGCAGCTATTGCTGCAACCTACTATGCGGATCTTGGTATTGAAGAAACAGATATATTCGTCTCTGATGGTGCAAAATGTGACATTTCTCGTCTGCAGGTTCTGAAATAATCCTATCCTCCCTTTCAGTTTATCATTCATGCTATAATGTCCCTTACATTTCTTCCAATTTTCAGGTCCTTTTTGGATCTAATGTGAAGATTGCAGTTCAAGATCCATCATATCCTGTATGAAAATTCTTCACTTGATGTTAACCCTTCCTAGTGCATGATTCCATTCTTAAACTGATGTTTATGGTCATGTGCTCCTTTTTTTTCATTTCTATCATACTGCTTCTTATTACTAACTATTACTTTCACACTTGTCTGATGTGTATTCCAACATGTGTTCCATTTTTATAGGCCTATGTTGATTCAAGTGTTATCATGGGGCAAACTGGTTTATATCAGGAGGATGTTCAGAAGTATGGAAATATTGAGTACATGAAATGCAGTCCTGAAAATGGGTTTTTCCCTGATCTGTCAAGTGTTCCACGAACAGATATAATCTTCTTTTGTTCACCCAACAATCCTACTGGTGCTGCTGCATCTCGGGACCAATTAACCAAATTAGTCAAATTTGCAAAGGACAATGGATCCATTATAGTTTATGATTCTGCTTATGCCATGTACATATCAGATGACAGCCCAAAATCTATCTTTGAAATTCCTGGAGCAAAGGAGGTAGGCTTTGGGATTTAAGCCCTTCCTACCACATATGGAAATTTATGGATTTTCTGCAAATACTTAAATCCACACCTGTCATGTGTTTTCTTGTGTGTAGGTTGCCATTGAAACAGCATCTTTCTCCAAATATGCTGGATTCACTGGTGTGCGTTTGGGTTGGACTGTGGTTCCTAAGGAGCTCCTTTTCTCAGATGGGCATCCTGTTGCTAAAGATTTCAACCGCATAGTCTGCACTTGCTTCAATGGTGCATCAAACATTTCTCAAGCCGGTGGTTTAGGTTGTCTATCTCCAGAGGGTTTAAAGGTAGCGTTTCAGAGTTTCTGAAAATCTTCATGTGGCTCTTTTGGCAATGCTTCATTTCATCTCTTTGTTCCTATGCAGGCCATGAGTGACGTTGTCGGCTTCTACAAGGAAAATACTAAAATTATTGTTGACACATTTACATCACTTGGATTCAACGTCTACGGTGCCAAGAATGCTCCATATGTGTGGGTGCACTTCCCTGGCCGTAATTCTTGGGATGTCTTCGCCGAAATTCTTGAGAAGGCACATGTGGTTACTACTCCTGGTAGCGGATTTGGGCCCGGTGGTGAAGGCTTCGTAAGGGTCAGTGCATTTGGGCACAGAGAGAACATTATTGAAGCTGCGAGAAGACTGAAGCAGCTGTACAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012434