BGIOSGA012435

From RiceWiki
Revision as of 09:47, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012435| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012435, complete gene.| tag = OS03G03...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA012435

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012435, complete gene.

LocusTag

OS03G0300300

Ensembl Transcript ID

BGIOSGA012435-TA

Ensembl Protein ID

BGIOSGA012435-PA

Length

5250

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:11603604..11608853

Sequence Coding Region

11603604..11603699,11603806..11603955,11604047..11604162,11604334..11604488,11605232..11605320
,11605450..11605984,11606113..11606280,11606931..11607109,11607231..11607310
,11607408..11607516,11608522..11608596,11608692..11608853

Genome Context

<gbrowseImage1> name=IndicaChromosome03:11603604..11608853 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:11603604..11608853 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCCGCGGCCGCCACCATCCGCGACCTGCTCACCTCCTTCAGCCCCGCCGCGGACTTCCTCGCCCTCTCCTCTGGCGACGGCCGCATCAAGGTATGGGACGCCGTGCGCGGCCACCTTCAGACCGAGTTCGCTGATATCCCGCCGGTGGAGGTGGGCGGCGGCGCGCGCGCCCCCGGGGCGAAGCGCGGTCACCTCGCACTGGACTACACCTGCATGAAGTGGGTACAGCTATTGAGCAAGAAGAAGCGGAAGGCAGGGAGTTCGCTGCTGGTGCTTGGCACTGGCAGTGGAGATGTCCTTGCACTTGATGTCGCCGCAGGGCAGTGGAAGTGGAGGGTCACTGATTGCCACCCTGGGGGTGTCACAGCTGTAGCCTACTCGAAGCATGGGCGAAGTTTGTACACCGGAGGCACTGATGGCATGGTCTGTAGGATCAATGCCTCAGATGGCTCTGTTGTAGAGAAATTTAAATCTTCATCAAAAGCAATTTCTGCATTAGCTGTGTCACCAGATGGGGAGATTTTAGCAACAGCTGCTGGCCAGTTGAGGACCTTTGATGCTTCTGATAACAAGAAGATTCAAAAATTCTCTGGCCATCCAGTAGCTGTGAGGAGCATGGTTTTTAGTGGTGATAGCCAATATGTTCTGTCATCTGGAGTTGGGGAACGCTATGTTGCCATTTGGAAGTTGGGTAGTGGTAAAACTCAGAGTTCAAGCTGTATACTCTCTATGGAGCATCCAGCGATCTTTGTGGACTGTAAATGTTCAGACATTAATGATACAGAAGGAGAAATACATGTGTTGGCTATTTCTGAGATTGGTGTCTGCTACTTTTGGTCTGGGACTAATATGGATGACCTGCGTAATAAGAAGCCCACTAAAATTGCATTGTCTGATTCCTCTCTTTCAAGATCTAAGCAAGGTTTTGCAATATTTGCCGCAAAACTGCAAGGAATAGATGGCCCTAATTCTGCACATGTTCTGCTGGCTTATGGATCTGTGGTGAAACCGTCTTTTGACAAACTGTTGGTTCGTTATGGCATGGATATTAGTTTGGGTGTATCTGATGATGGAGTTCTCTTACCCATGATTCAACCCACAAAGCCTCAGAAAGGCCAATCTGCTAAAAAGCAAGGAATTATAACGGCTCTAGACCGTGCTAATGCAGAAGATGCAATCCTTCCTCTCCCACAGCTCCATACGCAGGAAAAGAAAAGGAAACATAATGCAACAGAATCCAGTGGTGACATCCAGTCTGCACCTCATAGTGACCTTAGTTCTACAAAATTGATTGAGAAAAGAGCTCCTGTGCAAAGAATTGAAGATGACAGTGTATGCATCGAAGACATGATGCGGAAGTGTGGAGTTATTGATTCTAGAGTTGATCAGGGCATGGAAGGTCATCCTAGCATACCCACTAGTATTTTATCTGATCTATTTGGCAGCAGCAGTAAAATCGATGCTAATTTACCCAACAAGAAGATTCGAGCACATCTAAGATCCTTGAAGCCTAGAGATGCTTGCGAACTTTTAGAAAAATTAGTATCTTCATGGAAAACAAGATCTGGTAGTGCAGAGGTTGTTTTGCGGTGGATATACTGCTTATTAATTATCCATGGTCGTTTTATCCCCTTTGAGAAATCTAAAAAAATAATTAGCGACCTTGAGAAGATGTGTGGGGAAAGATACAAAGCAGCTGAAGATTTACTGAAGCTTTCTGGTCGTCTTCGATTGCTCATGGCTCAGATCGTCAAGGATCCAAATGATGTTTCTGAGCTTCCATCAGAGGAGATGCAGGATTCAGCGGCTGCTCAGTCTGATGAAGAGGAGGAAGATGATGAAATTGATGAAACGGTGTATGGTGAAGACGCTGATTCGTCTCAAACAAGTGATGACGACGCTGAATAG</cdnaseq>

Protein Sequence

<aaseq>MAPAAATIRDLLTSFSPAADFLALSSGDGRIKVWDAVRGHLQTEFADIPPVEVGGGARAPGAKRGHLALDYTCMKWVQLLSKKKRKAGSSLLVLGTGSGDVLALDVAAGQWKWRVTDCHPGGVTAVAYSKHGRSLYTGGTDGMVCRINASDGSVVEKFKSSSKAISALAVSPDGEILATAAGQLRTFDASDNKKIQKFSGHPVAVRSMVFSGDSQYVLSSGVGERYVAIWKLGSGKTQSSSCILSMEHPAIFVDCKCSDINDTEGEIHVLAISEIGVCYFWSGTNMDDLRNKKPTKIALSDSSLSRSKQGFAIFAAKLQGIDGPNSAHVLLAYGSVVKPSFDKLLVRYGMDISLGVSDDGVLLPMIQPTKPQKGQSAKKQGIITALDRANAEDAILPLPQLHTQEKKRKHNATESSGDIQSAPHSDLSSTKLIEKRAPVQRIEDDSVCIEDMMRKCGVIDSRVDQGMEGHPSIPTSILSDLFGSSSKIDANLPNKKIRAHLRSLKPRDACELLEKLVSSWKTRSGSAEVVLRWIYCLLIIHGRFIPFEKSKKIISDLEKMCGERYKAAEDLLKLSGRLRLLMAQIVKDPNDVSELPSEEMQDSAAAQSDEEEEDDEIDETVYGEDADSSQTSDDDAE</aaseq>

Gene Sequence

<dnaseqindica>1..96#203..352#444..559#731..885#1629..1717#1847..2381#2510..2677#3328..3506#3628..3707#3805..3913#4919..4993#5089..5250#ATGGCGCCCGCGGCCGCCACCATCCGCGACCTGCTCACCTCCTTCAGCCCCGCCGCGGACTTCCTCGCCCTCTCCTCTGGCGACGGCCGCATCAAGGCATGGAGCTCGAAGCTTTCCGCCCGCCCATCCTCCAAACCGCCGGGAGCTGCACGGTTACTGATGATGCCATGGGCTAACTCGATCCTTTCCACCTCCATTGCAGGTATGGGACGCCGTGCGCGGCCACCTTCAGACCGAGTTCGCTGATATCCCGCCGGTGGAGGTGGGCGGCGGCGCGCGCGCCCCCGGGGCGAAGCGCGGTCACCTCGCACTGGACTACACCTGCATGAAGTGGGTACAGCTATTGAGCAAGGTGAGCGAGCATTGCCCCCGAATTTTCGAGCTTCTACGGTTGGTGTTGTGGTACCGTGTGCCTATCGTGTGCTCGTGTTTTTGCCTTGCAGAAGAAGCGGAAGGCAGGGAGTTCGCTGCTGGTGCTTGGCACTGGCAGTGGAGATGTCCTTGCACTTGATGTCGCCGCAGGGCAGTGGAAGTGGAGGGTCACTGATTGCCACCCTGGGTACGTTTGGTGCTTCCATGGGAACTCGTGGCTTCATTTGTTAAACTATACTCCAAGCTCATTGAACCCTTGATTGTAGCTTTGAACATGTTTGGAATTTCTATGTTAATCTCCGCAAGCTTTAGCTAGATGTGTTCTCTTACATTGGAGTGCTTGTTTTTATGTGTTCAGGGGTGTCACAGCTGTAGCCTACTCGAAGCATGGGCGAAGTTTGTACACCGGAGGCACTGATGGCATGGTCTGTAGGATCAATGCCTCAGATGGCTCTGTTGTAGAGAAATTTAAATCTTCATCAAAAGCAATTTCTGCATTAGCTGTGTCACCAGGTATGCCCATGAAATTACGCCGCTGGTTTTATGTCTGGTTTCACCCCCTCTGAACTCCCCATTTGCTAACTATGCATACACTACTTTACTTCCTATGTTGTGTGCCTGTTGGTCATCTGGTTTACCTATATTGATGTTTTAGGATATTAAACTGTCTTCTTTAATATTTGTCAACTGTAACTTGATTGCCCTGAGGGACACTAATAATAGTTGAAGTGTTGAGTGTTTTCTGTAACCTTTGTAATGAATAACATTTTCAACTTATTTTGCCGTGCTATTGTGTTGATGCCCCGCTGTTGGCTAATTTATGGCCTAGGAGTTCTAAGTGCCTCTTGAGATGTTCCCTTTTCACATGTAACATTAATGTTCTGCTCGAAGTAGAGATGGAAATGTAACATAGGTATACCTGTCGGATACACGAATTGAATAAAGAAAAGCCCAGAGTTCTTCCTTGAAATATGGTGTATTGATTATGCATATGGATTTAGCTTGTTGCATGAATTTGAAGCTTAAAATCTTTATTTATCAATTAATAAGATGTATGTATAGAAATATTCTCTTTGCTGATATTTGTAGTTTGCTTAGGCCTTTTAGGATCTAATATCTATATTGATTATATGTCTTGTGCTGTAACAAAACATGCGTATGAGTATGTTGCACTTACATCTAGTCTCTATCTGAACCATGTCCACCCTAGCTCAAACTTCAAAGTAACAAATACTGCTTTTGCTTCATTTTATTAGATGGGGAGATTTTAGCAACAGCTGCTGGCCAGTTGAGGACCTTTGATGCTTCTGATAACAAGAAGATTCAAAAATTCTCTGGCCATCCAGTGAGTGTCTTTGCTTCCTCGTCCTTTAAGTGTGTTCTACTTCTGAGATTGTTTATCTTTCTGCTCGTATTATTTTGTCCTAAAATGCTAACCTTCTGCTATTGGCTACCCTAAAATTAACATTTTTAGGTAGCTGTGAGGAGCATGGTTTTTAGTGGTGATAGCCAATATGTTCTGTCATCTGGAGTTGGGGAACGCTATGTTGCCATTTGGAAGTTGGGTAGTGGTAAAACTCAGAGTTCAAGCTGTATACTCTCTATGGAGCATCCAGCGATCTTTGTGGACTGTAAATGTTCAGACATTAATGATACAGAAGGAGAAATACATGTGTTGGCTATTTCTGAGATTGGTGTCTGCTACTTTTGGTCTGGGACTAATATGGATGACCTGCGTAATAAGAAGCCCACTAAAATTGCATTGTCTGATTCCTCTCTTTCAAGATCTAAGCAAGGTTTTGCAATATTTGCCGCAAAACTGCAAGGAATAGATGGCCCTAATTCTGCACATGTTCTGCTGGCTTATGGATCTGTGGTGAAACCGTCTTTTGACAAACTGTTGGTTCGTTATGGCATGGATATTAGTTTGGGTGTATCTGATGATGGAGTTCTCTTACCCATGATTCAACCCACAAAGCCTCAGAAAGGCCAATCTGCTAAAAAGCAAGGTACACTGCTGGTATCTATAGATATACACATAATCCTGCACTTCTGTTTGGTCCCTTGCCTCCATTGTAGAACACTCAACTATTGTCAATGGTTACTCTTGGGCTAAATCTCAATTGTTTTCTTGTAGGAATTATAACGGCTCTAGACCGTGCTAATGCAGAAGATGCAATCCTTCCTCTCCCACAGCTCCATACGCAGGAAAAGAAAAGGAAACATAATGCAACAGAATCCAGTGGTGACATCCAGTCTGCACCTCATAGTGACCTTAGTTCTACAAAATTGATTGAGAAAAGAGGTAAATCATCTGTTTGTAGCATCTTCAGTAGTCATAATGCTTTTGTTCTCATGGCAGTGTAGATACGAACTGGTACATAACTGGCACAGTTAGCTAGTGAAGTGTGGAACCACATAAGTTTGTATAGTACATATATGTGTGCTTCCTCATGTTTGGGCAAACTTCAAATAAATATACTATAACATCTTATAAGTTACAAATGAAAATTATTATTATAATCCATTCTAATAATTATATACATGAGTGCATGAGATCAATCTACCTAGCCTACGAATACGCATGCAAAATAACCTGGTCTTTTACAAAAGATCCTTCAAACAACAAACATGTTTTCGGGAGTGGGGAAATGGGTGTAGAGCACACCCATTCGCCTCCAACTCCATCTCAAAGGAAGATAAGTGACGTTATGTGTCCATATGATCTTTCTCTAGAGACTTTTAACTCTGTGGGAGCAATTTATTGCAGGGGCCTATACCCTTGTGGTTTTCATGGCAAGAATGTAACAACTGCTATGAGCAATAATTCTAGTCTCTCAGTTGTTATAGGTTTTACTATAGTTTTAACATTAAACACAAATTTTGTTATATTTAACATGTATTTCTGTTAAATTGATCTTCACTATTTGCTCAAAAACCCTTTTGCTTGTCTAGCTCCTGTGCAAAGAATTGAAGATGACAGTGTATGCATCGAAGACATGATGCGGAAGTGTGGAGTTATTGATTCTAGAGTTGATCAGGGCATGGAAGGTCATCCTAGCATACCCACTAGTATTTTATCTGATCTATTTGGCAGCAGCAGTAAAATCGATGCTAATTTACCCAACAAGAAGGTTTGTGAGAACTGAATTTCAGTCAAATGTTCTGTACTTCCACCATATAACTGTTTGCATGTTTACACATTACAGTATATATACAACTGATGAAACCTGATGCATTGATATGGTTCAACAGATTCGAGCACATCTAAGATCCTTGAAGCCTAGAGATGCTTGCGAACTTTTAGAAAAATTAGTATCTTCATGGAAAACAAGGTGTCCATGACTCTTTTCCCATGTTTGTTCCCCCACAACGCATTTTCATTCGTTTTTATCCTTGTATGCTTACCAATTGCTGATTTATTCTCTACAGATCTGGTAGTGCAGAGGTTGTTTTGCGGTGGATATACTGCTTATTAATTATCCATGGTCGTTTTATCCCCTTTGAGAAATCTAAAAAAATAATTAGCGACCTTGAGAAGGTATTATATGTGTTACCAGTACTATCTCTTGTGTGCTATGCAGATTATTTGAAACATGTTACTGTTGTGGTTGTCATCATGCTGTGTTGTAGTGGAGTTGGGGGGTTAAGCTATTAGCAACTATTGCCTTAAATGACTGCAGAATGTGGATAACATATTCTGATTCTAATTTAAAGACCACCAATGCAGGCAGGGTATTTCAGAATATTGTTTCGTGACCTATTTTTCTGATAAAAGTACAAGTAACAATGATGGCAAGAACTCACCTTTGATGAGAACTTGCCAAGTCACAATCTGAGCCATTTGATCCACTCTAGTGGATGCTAATGTAGTTGTTTTCCCATGAGAGTTCTCAAGTCGTCATTGAACAATGGATTCCCATTTTAGATATCTCCTGACAACTCAAACAATGTTGTATTGACACTTCATAACATCAATTAAAAAGTCATGTGCAGTATTGAGCAAAGCACATAGAAAGTTAAAGAAATAAGCATGCTGTGTATCTAGATTGGGAAGATGTCATGCTATGCAGTGCTAGTAAATTATAGATATCTTTATTTTATGTACCATGACTGATTTGATCAAGTTGCCCCCACCAATGCTGGCCAATTTCTGTTATGTCAAATCTGGGGTTGTCAATTTGGCTGCCCAAACTTATAATAAATTTACTAAAGTATATTGCATGCCCAGTATTTACAAATGAAACACTTCCCAATTTCAACAACATGGTCAGATTTTGATCAATATTACTTGGAAAAAAACTGAGACTATAACTGTGTGTTTACTACGTCAAGTAAAAGAACTGAAAATTCAAAGGTCGAACTGAACCACCGCAACTATGAGCTTACCATGTCGAACATACAAAACAAAAAATTGAAATGAACCATTACAGCTATGTGTTTTTCTTCTTTTTTCTTCTTCGGGGAATTGCAACTATGAGTTTACCATGCGAAACAAACAAAACCAAAGTTGAAGAGATTGAAAGAAACCATTTTTCGTTTGCAGATGTGTGGGGAAAGATACAAAGCAGCTGAAGATTTACTGAAGCTTTCTGGTCGTCTTCGATTGCTCATGGCTCAGGTTTTAACCATTAATAATACTGCGTAATGAGTCAATATTCTTAGTGTATAAGTTAATGATGATTTAATGATCATGTGCGTACTTCACTTTTGTAGATCGTCAAGGATCCAAATGATGTTTCTGAGCTTCCATCAGAGGAGATGCAGGATTCAGCGGCTGCTCAGTCTGATGAAGAGGAGGAAGATGATGAAATTGATGAAACGGTGTATGGTGAAGACGCTGATTCGTCTCAAACAAGTGATGACGACGCTGAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012435

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA012435&oldid=57258"