Os12g0442800

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Revision as of 10:29, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0442800| Description = Similar to Sulfite oxidase (EC 1.8.3.1) (Moco containig protein AtMCP) (At-SO) (AtSOX)| Version = NM_001073234.1 GI:1...")
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Gene Name

Os12g0442800

Description

Similar to Sulfite oxidase (EC 1.8.3.1) (Moco containig protein AtMCP) (At-SO) (AtSOX)

Version

NM_001073234.1 GI:115488429 GeneID:4352143

Length

3112 bp

Definition

Oryza sativa Japonica Group Os12g0442800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:14975560..14978671

Sequence Coding Region

14975734..14975859,14975988..14976203,14976290..14976337,14976709..14976810,14976893..14977003
,14977137..14977232,14977328..14977446,14977763..14977844,14977931..14977967
,14978069..14978131,14978236..14978351,14978480..14978566

Expression

GEO Profiles:Os12g0442800

Genome Context

<gbrowseImage1> name=NC_008405:14975560..14978671 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:14975560..14978671 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatgcggcagggagcgctgcgaggcccctccgattactcccaggagcccacccgccacccctccctgcgcatcaacgccaaggagccgttcaatgcggaggcgacgaggcgggacctcgtggcgtcctacatcacccccgtggatctcttcctcaagaggaaccatggccccatccccatcctccacgacatcgacagctactatgtgacggttgccggtctgatagagaggccagcgaagctttatctgaatgacatcaagaagctgcccaagtacaatgtcactgccactctgcagtgtgcagggaacaggaggaccgaaatgagcaagagcaggaaggtgagaggcgtcggatgggatgtctgcgctctcgggaatgcgacatggggaggagctaagttatctgatgtccttcagctcattggtgtgccatatcatactgaaattactccatcaggaggaaagcatgttgagttcactagtgtagatcagtgccctgaggaaaaaggtggcccttacaaagcatcgatttctttaggccatgcaacaaatcctgcagcagatgtactggttgcatatgaaatgaatggtgaggtgctcaagcgtgatcatggataccctctccgtgtcgtagttccaggtgtgattggtgctcgttcagtcaaatggttggacagaattgacataattgaggaagagtgtcagggtttctttatgcaaaaggattacaaaatgttccctccatctgttgattgggacaatattgtgtggtcaaccaggaagccccaaatggactacccagttcagtctgccatatgctctttggaagacacaaatgccatcattccaggagaagtgactgtcactggatatgcgttgtcaggaggcggccgaggtattgagagggtggatatatccactgacggtggcaagacttggttcggtgctgtccggtaccaaaaggaaggtgtaccatacgtcgcaggtgacataagtagtgacaagtgggcttgggttctcttcaagactgttatcgatgtgaaaggtgacacggaggttatcgtaaaagcggttgattccagtgcaaatgtgcaacctgagagcgtggagaccatatggaaccttagagggatcctgaacacctgctggcaccgtgttcgccttctgacaatacacaaccttagaagccttttgtga</cdnaseq>

Protein Sequence

<aaseq>MAMRQGALRGPSDYSQEPTRHPSLRINAKEPFNAEATRRDLVAS YITPVDLFLKRNHGPIPILHDIDSYYVTVAGLIERPAKLYLNDIKKLPKYNVTATLQC AGNRRTEMSKSRKVRGVGWDVCALGNATWGGAKLSDVLQLIGVPYHTEITPSGGKHVE FTSVDQCPEEKGGPYKASISLGHATNPAADVLVAYEMNGEVLKRDHGYPLRVVVPGVI GARSVKWLDRIDIIEEECQGFFMQKDYKMFPPSVDWDNIVWSTRKPQMDYPVQSAICS LEDTNAIIPGEVTVTGYALSGGGRGIERVDISTDGGKTWFGAVRYQKEGVPYVAGDIS SDKWAWVLFKTVIDVKGDTEVIVKAVDSSANVQPESVETIWNLRGILNTCWHRVRLLT IHNLRSLL</aaseq>

Gene Sequence

<dnaseqindica>2813..2938#2469..2684#2335..2382#1862..1963#1669..1779#1440..1535#1226..1344#828..909#705..741#541..603#321..436#106..192#agagagagagagagctggaaatggatcccctttaaaagccgttgcgttggctctgccgccttggcaacaacatccaatttccaaaccaagagagaagcagcagcgatggcgatgcggcagggagcgctgcgaggcccctccgattactcccaggagcccacccgccacccctccctgcgcatcaacgccaaggtgccggccgtgatcgcagcagcaagaatcgcatcttcttccttgagtttctactcgtacgtactcgcgttgagttcttttgtcgcgcaagtaaaatgtgttttttggggggcgatggatgcgtgcaggagccgttcaatgcggaggcgacgaggcgggacctcgtggcgtcctacatcacccccgtggatctcttcctcaagaggaaccatggccccatccccatcctccacgacatcgacaggtacggttcttgatttgtatttcctctctttgcctgatttatttttgtcaccttcttagtttcaacttaaaatggtttcagtcttttgttttgtggatttgcagctactatgtgacggttgccggtctgatagagaggccagcgaagctttatctgaatgacatcaagtgagtcgtgtgtcagtcatcgtggctgtgctatgcatgccttctgtttgatgatatgcctgagaggtgatcgagttttttcgtgctttctttgtgtgcaggaagctgcccaagtacaatgtcactgccactctgcaggtggattttggtgtcctggtggactggtggtgtgtgtgtggattcttagggccgaattttgtgtgacatggtttcgattggttcagtgtgcagggaacaggaggaccgaaatgagcaagagcaggaaggtgagaggcgtcggatgggatgtctgcgctctcgggaatggttagtgtgcttcacttctcaatcttctttgtgtcttactattagcgtggtggaatacggcaaaaggaagaaagaaagaaaaaagatgcatggacattctccagttaagtgtgtataggaagttgtcatcactcaccaatgtaataaggaaacctgtcttatatgatcttagctgcaattttgaatagaagtgagttccatgagattgataaaggatgtgctgtaaatgtttaacttaattcttctgcacttttttactgtcttcgatgcataatcatcatattcactgtcactgaatttatgtgcttcattttagcgacatggggaggagctaagttatctgatgtccttcagctcattggtgtgccatatcatactgaaattactccatcaggaggaaagcatgttgagttcactagtgtagatcagtgccctgtgagtttcttgagacttcatttatgaaaaaaaaaaatatatatatgacagctttagttattttttctataacatctttttcaaaatattattaggaggaaaaaggtggcccttacaaagcatcgatttctttaggccatgcaacaaatcctgcagcagatgtactggttgcatatgaaatgaatggtgaggtaggaccataggagataataataggttatatcttatataccatccttacatccatctatcaggatatttggttatttcatatatctgtgcatttttctaatcatatccctattatgtgtttttgttacaaaggtgctcaagcgtgatcatggataccctctccgtgtcgtagttccaggtgtgattggtgctcgttcagtcaaatggttggacagaattgacataattgaggaagagtgtcaggtatgcattatctaacttcttgtcaatatgtaaatatattttcagtttgccaaaaagatttttgaaactcgttcattttcagggtttctttatgcaaaaggattacaaaatgttccctccatctgttgattgggacaatattgtgtggtcaaccaggaagccccaaatggactacccagttcaggtgttaattcttaaccgtcttgtttccacacagtaagagcaagagcaactatagcaaattgagcaattcagaaacaaaaaacatcatgttcctaaccatgaaaagtctgagtatacaaggaatttccagtatacatcatttcgatacaacagcatattggaatgaggatggcatccgtattttgtgctgcttatctaaatatcacacagtaaactacatgaagttctgtttccaatttacattgtcatatattctattttgccatgcaaaaccttactgtaacagtaatttcctctagtaatttactgtattgcataatattgaaaaattgtgtgcactaattaccttttggaccgactctgatatttcagtctgccatatgctctttggaagacacaaatgccatcattccaggagaagtgagttcagcttcttaactgggcttttttatttccattttgcttcatgacttacccctaacgctttgccttattgtgctcttcaggtgactgtcactggatatgcgttgtcaggaggcggccgaggtattgagagggtggatatatccactgacggtggcaagacttggttcggtgctgtccggtaccaaaaggaaggtgtaccatacgtcgcaggtgacataagtagtgacaagtgggcttgggttctcttcaagactgttatcgatgtgaaaggtgacacggaggttatcgtaaaagcggtatgctatcttgctagttcgtcctacttgcaattcaatgttgttttttctgttccattttacatattggctgcaggattgttcattctaatataaatgtactgaatcttgtggcacaaactatgcaggttgattccagtgcaaatgtgcaacctgagagcgtggagaccatatggaaccttagagggatcctgaacacctgctggcaccgtgttcgccttctgacaatacacaaccttagaagccttttgtgatgatcctacacatacacctaactagtattatctctttaaatttaccgctctatgttgcactgtcgttccgctttcggatctgcattggagaaaaagagtcaagagggaccaataatataatgctggctgacttgcttggatgctggaataaaatcccgtgccaccttgttatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0442800, RefSeq:Os12g0442800