Os12g0442900

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Revision as of 10:29, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0442900| Description = DNA-binding SAP domain containing protein| Version = NM_001073235.1 GI:115488431 GeneID:4352144| Length = 6859 bp| ...")
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Gene Name

Os12g0442900

Description

DNA-binding SAP domain containing protein

Version

NM_001073235.1 GI:115488431 GeneID:4352144

Length

6859 bp

Definition

Oryza sativa Japonica Group Os12g0442900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:14986611..14993469

Sequence Coding Region

14986759..14986797,14988865..14988968,14990976..14991055,14991922..14992045,14993003..14993048
,14993165..14993308

Expression

GEO Profiles:Os12g0442900

Genome Context

<gbrowseImage1> name=NC_008405:14986611..14993469 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:14986611..14993469 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgccgatggcggcggcggcggaggccggaagagctcgtcgccggccgggaagccggcggaggcggcacgggcggggagcctgctcgccggactcccctcgcggggcaacttcgtcgccgacagcatcgcgtccagcatgggaggcctcccggtttatgtctgcctgcacgacaccgctcctccagagggacaagttatagacacagacaccacaaacattttaatcagatctctccagttgagcaaacagaaaaatgaggcaaaagatgtaggatcaaggactccaggagaaagcagcaaggggaaaaggtctgcttccagacttttagatggcaagaatccatctaaaagagctaacactggcagcacggcagggtcatctgcccatggggaattgggatctgttttttctgagcagacgctccaatcatttacggtggagaagttgcgtattcttctgaaagagagagggctctcaccaaaaggcaaaaaggatgaactgatcgcccgcttaattgagtcctcggagtga</cdnaseq>

Protein Sequence

<aaseq>MGADGGGGGGRKSSSPAGKPAEAARAGSLLAGLPSRGNFVADSI ASSMGGLPVYVCLHDTAPPEGQVIDTDTTNILIRSLQLSKQKNEAKDVGSRTPGESSK GKRSASRLLDGKNPSKRANTGSTAGSSAHGELGSVFSEQTLQSFTVEKLRILLKERGL SPKGKKDELIARLIESSE</aaseq>

Gene Sequence

<dnaseqindica>6673..6711#4502..4605#2415..2494#1425..1548#422..467#162..305#aacctttcctcttcttcctcttcccctccctctcgctgcctgccgcctctgcttgctcagatcttctcctctccttcccggattccaccctcagttgttgtctcacagtctccgaatcgctgggcggtggagccattggtgctcacccacgggcacgggcgatgggcgccgatggcggcggcggcggaggccggaagagctcgtcgccggccgggaagccggcggaggcggcacgggcggggagcctgctcgccggactcccctcgcggggcaacttcgtcgccgacagcatcgcgtccagcatggtgcgttcgttcccccccacccctaaaatggaccagcctttttcttggcatgttagaagggttcttgtgaaaagccctctgatttttatgattttttattattattttttgcgcagggaggcctcccggtttatgtctgcctgcacgacaccgctcctccaggtttgtttgtgattttctaggataatcaagctttacttttattattgtgatgatgctaatttgttgttttaggaatgagggctgattgtagtgctagtggtgtgtactgtggagagacagatttgaagtagaaggatgatcctttctactagggttttatgtagaattttccttgtaagaacgcagtcatcttgcctaggttttgttctttcgattggcaatgctgttggcatcatgcttaatttgtggttactgaatttgttttgctgatgttaagagttggaatttctatgggtttactcagaatgtctcttgcaggaaagctaaagtctatatttgttctttggatttgtggtggcactgttgattgttgtcatgcttattttatggtttcctggagtagtttacaggttttcggagtgagaattgcaggtgtttgtgaaatattgtactgaaccattctttggtggttaaatagatttaaatcttctggatgtaaagtgtaggagtttagtagcttggcaatggggataaatggtttgctttccattcaatgaaatttagatttagtagtgtttgggagtgaattttactgcctttgagttttctagtgattacctaaagtgagctgtccctaaggaaaaaatgaagctacagagaagaatttctgatgttgctttttttttcttcggatcgagtgagacattgtgctgctgtcacaaaacttttgccatgtgtttcttgggagtcttatcttttgaatatcatttttggacgtatatgatttacattttatagtggcagttgttagtatatgatctattgtcagaccatgatcttttacatattttcattacttatgttcttatgataaagctgattactgatgacacaaacagatcattttaaggctgttttgttctgttcattgactgatcaccgtttttgtcattttagagggacaagttatagacacagacaccacaaacattttaatcagatctctccagttgagcaaacagaaaaatgaggcaaaagatgtaggatcaaggactccaggagaaagcagcaaggggaaaaggtacatcgctcttacgacatctttacaatattgaacctcatttttgcaatgtacaatgttcagttttagagtttcaattaacagcttcagattattttcttcatgacatggttacttgtgaactgagcatgtccctcctgaaacttttttgatcaaataatcctccctggaacttgcttcttaatctagcgttgtttgtcattttcctcacttgatattaagctattgacttactgtcatttttatcgatctgttgaacagaaattcatccatcatagttattgcctgagcagaatgtagtttagctctatttttttgagcaaaaaccatctgcagaaccttcgtcaaatatcaatggaaacattgttttgcatgaaggccatcaatttgatacaagctgttggatgattttggaaacttgtttccctttaaaaaaaaatctatgaactaagtaaaatccatatcgtagtctcttggatgatacaagtgctaggctacagttaaaactgtaagataggcaattatcagacgaactctgaaaacatgccttgacctgggattaacttggggaatgccctagtctatttaattgaagggcggtgtgctactgccatttgcattacaaaaaagttatgccagacaaacctattgttctcctatgttttttttttttttagattttgatttggtgccttttctgtcattggaatttttgtgccatttagattgcttgtgatgccagctagtaggacaaaaatcaactcttttcaattgctgacttgtagagaagttgtctcctaaaacttcttgcaattgtcagttaaattttatcctccatgtagcttatgttccttcttttttatcaggtctgcttccagacttttagatggcaagaatccatctaaaagagctaacactggcagcacggcagggtcatctgcccatggtaactatttgattcttctctgcaccctttcttatatgagtagtcatgcatagttttatgagtaatatgtgcattgaaggaaaaggcttatcagtaatttatttgttgctgttgtacgtttgcagtgttaggtaaataatgttagttccttggaaaagaaattgctgttttccctttgttttcttggtctttaaatttggagttgtcaaacttaggctgtgttcttttggaggggttgcgaacccctccccttcgcacggaaaacggagcgatagattaacacgtggttaattaagtattacctataaaaaacttgaaaaatggattaatatgattttttaaagcaactttcctatataaactttatgcaaaacacgtaccgtttagcagtttgaaaagcgtgcacgcggaaaacgagggagatgggttgggaacccatgggaaagaacacaccttaggccgtgttctttttatgggattgttttggctgattagctgcatgcaaaatgagaaacataattagcatatgaataattgagtattaattattaaaaacttgaaaaatggatttattttttttaaagcatcttctacatagatagtttccgcacgaaacataccattttttttttgagatgagagaaacataccatttagtagtttgaaaagtgtgttaacggaaatcgaggaatagctaagtttaatcagctctttagaacttgcccttaatttgggtgagaagttgaagttattataggacaaataaactggtactctactttgagtggtacttttctgtaaaaaaaatggcactgagggcatttatgaaactatagctgatgcagatagcaaaaattgcgtgattcattgtcgctttgctaacttttatgttgctattatatgacctatttcctgaattttcagaagcatttagacagttgtatacatattttgtttttataatacgatgcaacatttgtttctttttctgactacagtgatgcttctggccagcttagttatatgaagtaagaaatcaatacatcttaaattgaagtatccaagtataaattccaatatggctactacgtcatatatcaaaatcttaaaatataaataacattatgatagttttgttggtaaaattgattaatttgagaaaccaatgatgtggttttaatactgagtactggtagataattaaaggaacgcactgccaaataccacgcaaatgtcacataagctggagaataacatttgctgtgatattttccatccaaaggcctcaaatgaacaatcatgcaggccgaactattttcttatttccttcctttgatgtactccatgtaatgtgcccatcagccgctgcccacttcctccaacccagtgcatggcctgaggatgacgttctaaaaagtaggggccagatggaagagagattgatttccaactgactgtacattagaggactagagaagaagaaataatacagaacaagaaacaaaccagggtagtttttacattttcaatgttctccccaaaataggacccgccgttacttttggatggacaaaatggacagcagtggtattttgcaattcacagattttgcaatggcatttaccagcccaagtttgcagtggtattttccaagttacccttctttgagatggcactagcaaatttattgtgtatatccctttgtatatgatctgaataaatagtgaaactcagaataatttcagatgattaaagtctgctctaactgtgcaagcctagttttcttgtaccaaattagaattctgaataacaataagattccatatgtttttgaaaaaaaagattttgacctatattgtacatagattattcagttaacacctttttttaggtattttccctcatcatctgagcatcaatattatcttgagaacaacataatccacaaaattctgagcatcaatcattttagtactattgaatataatatcaactttgatcttgcaggggaattgggatctgttttttctgagcagacgctccaatcatttacggtggagaagttgcgtattcttctgaaagagagagggctctcaccaaaaggcaaaaaggtaagtacagaaaatgcttaattttgtaactccctctttcagttttaagaacttgcaaaatcttgtttatgcctgggagattgctagacgtttgacacccaagggtacattgttctgctgtctcatttaaatctagaaaattttaatagtactttagttttctagtcataaatttatgactagtgagtcccagtgtgaatatttctgttgtaaatatttttttcattatattaataaagcattaacagcaggggcctcccctgctgtgttgtctttttaaaaaaaaagggaatcatacatgtgtggaacacgctgcttaaataaaaaatcatatgtttggaattgttgataatcatatacctgaatttcaagaaatattcacatctttttgattgatcgactttagcaattggaatttcgatctctggtgactggtagcctagcggtgggtcatcaggtagagcagtttgttatatgcttgggtgagggtgtttggcttcatcagaagcatgcacaatgtactgttggcgactgttgctgtggtgctgaccattatggtgttggaattaaagggaaggaaccctcagattgtggtgggtaagagatggtggtagtggaatcatatcaaagtgtggtgctattgactagagaaaagttgatgcaggaaggaaaaaactggagattgtggcggagggttgggtttggtttggctttggccggggataataaatgatggagctgtagcctgtagaattaggccttgtttagttcccaaaacaaaaacttttcacccatcacatcaaatatttggacacatgcgtggagtattaattatggacaaaaagaaaaaccaattacacagtttacgtgtaaattgtgagatgaatcttttaagcctaattgcgccatgatttgacaatgtggtgctacagtaaacatttgctaatgacagattaattaggcttaataaatttgtctcgcagtttcctagcggaatctgtaatttgttttgttattagattacgtttaatacttcaaatgtatatccgtatatccgatgtgacaaccaaacccgaaaatattccccaactaaacaaggccttagatggacttgagaggggtggattttgcttagagggtatacagaagggtaatgattacttgaatagacatggtggagaggatgttggtttgggtgcgctgacgattgaggatatatactgaaggttttagatatgatgtgtgcaaaccatgcagaaggagacatgaccatattggacagctttggtgggcattcaaatttttaatgcaatatgatatctaattggcaaatggtaatttgtatggtgatgaaatcacaaacacacaagttacagaaatggaaatacaattgttttgatgtttttagggccacagttgtgttttcttgactaactatgattagtgaaccttgtaaacaaataaacaatagcatgagaaacagaaccctcaccccaaccatgatcagcactgtttgcacctacggacactggatttcacagggaaactggaatttgaaatggagtactttctttgatgagtagaaaggcatgtattgaaaggctaaacaccggctgatagaagttgtcaatatatggagacaatagtcttatattcgctgcccattaaacaaaataatactccctccatcccaaaatgtttgatgccgttgacttttttgaaaatgtttaaccgttcatcttattcaaaagatttaagtaattattaatttttttcctatcatttgatttattgttaaatatacttttatgtatacatatagtttacatatttaacaaatttttttgaataaaacgaacggtcaaacatgtttaaaaaagtcaacggcgtcaaacattttaggaaggaggtagtatgaaggatatcacacgttcgaagggttgttcactttactgtctatcttttgaacatttagttatgaaccaaaaaagaatagcactcatttattttgagatcactcatctaattccttttcttgctaaatcaaacttttgtcccttgttgcaggatgaactgatcgcccgcttaattgagtcctcggagtgatctgaactgcgatcggaacctcattttgttggatgttgtaccgtagtgacgatcatacaccatgcaagtgaacttctatcgcagacctcatgtaagcatatatttcatacagtgccgaaatgaaagatctggctgatagtttccacat</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0442900, RefSeq:Os12g0442900