BGIOSGA012475

From RiceWiki
Revision as of 09:47, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012475| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012475, complete gene.| tag = OsI_112...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA012475

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012475, complete gene.

LocusTag

OsI_11256

Ensembl Transcript ID

BGIOSGA012475-TA

Ensembl Protein ID

BGIOSGA012475-PA

Length

1355

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:12126966..12128320

Sequence Coding Region

12126966..12127055,12127202..12127246,12127349..12128320

Genome Context

<gbrowseImage1> name=IndicaChromosome03:12126966..12128320 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:12126966..12128320 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGGGAGGGCCCCTGACGCTGGAGAGGTACCACCGTTTCTTCGTCGACCCATGGGGCACCCGCCTCACCATCGACCACCTCAACCACATCATCTCCATGCACGGCTTCGTCAAGCTCCACCGCTCCAACAAGGGCGACATCATGCGTCGGCTGGTGGGGCAGGTGGACCTGCAGCCGCCGCGGCGCTCCACGCTGCACCGCGCGGCGGAGGGCCCGCCGTCCGACGCCGTCATCGCCGCCGACGTGGTGAGCGCCGACGTGGACGCCATCGGGTGGACGGAGTGCCCCATCGGCTCCGTGGCCGTCTTGGCCGCGTCGCCCGGGGACGCGCCGGAGCCGGTGGAGCCCGATCCCCGCCCCGCGGACTTCGTGCTCGCCGGGCGCCGCGCGCGGTCCAAGCGGAGCCGCAGCTCGGCCTACGGTCACAGGCCGCCCGAGCCCGACGACGGTGGCTCGTCGATGGAGGTGGAGGAGAAGGAAGATGGGGAGTGGTTGCCGCCACCGCCGTCGACTCCGCCGCGGTGGACGCGTTCTCCAACTCCGCCTCCGCCGCTTCCCTCGCCACCACACGCGACGCCGCCGCCTCCTCCGCCTCCGCCACCGCGCGAGATGGTGGCACCGCCGCCGCCTCCTCCCCCACCGTACTACGGCCAGCCCACGTTGGCGCCGCCTCCTCCTCCTCCTCCCCCACCGTACTGCGGCCACCCGACGTTGGCGCCGCTTCCTCCCCGACCCCTACACTTCGGCGCGTCGCCCGCGGTGGTGCCATGGCTGTCGTGGGGCCTGCCGTTGCCGGCGGCGGTGCCACTGGCGCCGCCGCCGTTCCCGGGAGCGCCTGCGTTCGCGCAGCATCCCCCGGCGGGACAGCGACCTTTCTGGAGCCCACCGACGGTGCCGCCGTGTTACCCGGCACCATTCTGGGGCGCGCCGTTCTGGGGTGCTCAACCTCCGCCGCCGCGGCCGTCGCCGCTGCCGCACTGGGGCCACATCAGATCGCCGCCAGCTCCAGCGCTGCATCAGCCACCTCCTCCCACCTTGCAGCTGCAGCAGCAGCAATCGCCGCCGCCGCCGCCGGGAGTTTTCTGGGGCAGGCCGGCGTATTAG</cdnaseq>

Protein Sequence

<aaseq>MQGGPLTLERYHRFFVDPWGTRLTIDHLNHIISMHGFVKLHRSNKGDIMRRLVGQVDLQPPRRSTLHRAAEGPPSDAVIAADVVSADVDAIGWTECPIGSVAVLAASPGDAPEPVEPDPRPADFVLAGRRARSKRSRSSAYGHRPPEPDDGGSSMEVEEKEDGEWLPPPPSTPPRWTRSPTPPPPLPSPPHATPPPPPPPPPREMVAPPPPPPPPYYGQPTLAPPPPPPPPPYCGHPTLAPLPPRPLHFGASPAVVPWLSWGLPLPAAVPLAPPPFPGAPAFAQHPPAGQRPFWSPPTVPPCYPAPFWGAPFWGAQPPPPRPSPLPHWGHIRSPPAPALHQPPPPTLQLQQQQSPPPPPGVFWGRPAY</aaseq>

Gene Sequence

<dnaseqindica>1..90#237..281#384..1355#ATGCAGGGAGGGCCCCTGACGCTGGAGAGGTACCACCGTTTCTTCGTCGACCCATGGGGCACCCGCCTCACCATCGACCACCTCAACCACGTACGTACGCCCGCACGCCCGCACGCCGTCGTCTGCTTGTGTTGTGTTCTTTTTAGTCTAGATTGCTGCTTCTGTTTTCGTTGTGCTTGATCTTTCTGTGTTGGCGGCATGCATGTCACGTACTTCGGTGGGCGGGCGGCACACAGATCATCTCCATGCACGGCTTCGTCAAGCTCCACCGCTCCAACAAGGTTGGTTGGTTGCCTTCTCGATACGTTTCGGTCTTCTTCTTCTTTTTTTTTTCTCTCTCGTTGTTGCGAGCGTTATGTGTGACGAGGCGGAGTTGCGAGCAGGGCGACATCATGCGTCGGCTGGTGGGGCAGGTGGACCTGCAGCCGCCGCGGCGCTCCACGCTGCACCGCGCGGCGGAGGGCCCGCCGTCCGACGCCGTCATCGCCGCCGACGTGGTGAGCGCCGACGTGGACGCCATCGGGTGGACGGAGTGCCCCATCGGCTCCGTGGCCGTCTTGGCCGCGTCGCCCGGGGACGCGCCGGAGCCGGTGGAGCCCGATCCCCGCCCCGCGGACTTCGTGCTCGCCGGGCGCCGCGCGCGGTCCAAGCGGAGCCGCAGCTCGGCCTACGGTCACAGGCCGCCCGAGCCCGACGACGGTGGCTCGTCGATGGAGGTGGAGGAGAAGGAAGATGGGGAGTGGTTGCCGCCACCGCCGTCGACTCCGCCGCGGTGGACGCGTTCTCCAACTCCGCCTCCGCCGCTTCCCTCGCCACCACACGCGACGCCGCCGCCTCCTCCGCCTCCGCCACCGCGCGAGATGGTGGCACCGCCGCCGCCTCCTCCCCCACCGTACTACGGCCAGCCCACGTTGGCGCCGCCTCCTCCTCCTCCTCCCCCACCGTACTGCGGCCACCCGACGTTGGCGCCGCTTCCTCCCCGACCCCTACACTTCGGCGCGTCGCCCGCGGTGGTGCCATGGCTGTCGTGGGGCCTGCCGTTGCCGGCGGCGGTGCCACTGGCGCCGCCGCCGTTCCCGGGAGCGCCTGCGTTCGCGCAGCATCCCCCGGCGGGACAGCGACCTTTCTGGAGCCCACCGACGGTGCCGCCGTGTTACCCGGCACCATTCTGGGGCGCGCCGTTCTGGGGTGCTCAACCTCCGCCGCCGCGGCCGTCGCCGCTGCCGCACTGGGGCCACATCAGATCGCCGCCAGCTCCAGCGCTGCATCAGCCACCTCCTCCCACCTTGCAGCTGCAGCAGCAGCAATCGCCGCCGCCGCCGCCGGGAGTTTTCTGGGGCAGGCCGGCGTATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012475