BGIOSGA012519

From RiceWiki
Revision as of 09:48, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012519| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012519, complete gene.| tag = OS03G03...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA012519

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012519, complete gene.

LocusTag

OS03G0320800

Ensembl Transcript ID

BGIOSGA012519-TA

Ensembl Protein ID

BGIOSGA012519-PA

Length

3368

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:12929813..12933180

Sequence Coding Region

12929813..12930344,12930870..12932489,12932591..12933180

Genome Context

<gbrowseImage1> name=IndicaChromosome03:12929813..12933180 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:12929813..12933180 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTTCTCAGGTCAAATTCCGGCTGAATTGACTAAATTGGCTAATTTGGGACATCTCAATCTCTCTTCCAATGGTTTTGGTGGTGCATTGCCTTTGGGTCTCCGGAACTTAAGGAAACTGAAATATCTGGACCTTCGTGGCAATGGCTTTACTGGCAAATTGGATGACATATTTGCAGAATTACAGAGCCCGGTTCATGTTGATTTGAGCTGCAACCGGTTCTCGGGTTCATTGATATCAATATCTGACAACTCATCTGTGGTTAGCACACTTCAGTACTTGAATGTTAGCCACAATATGCTGTCAGGAGCATTATTTGAGAGTGATCCAATGCCTCTGTTTGATAGCCTGGAGGTGTTTGATGCAAGTTACAATATGCTTGAGGGCAATATTCCACCATTTAATTTTGTGATTTCCCTCAAGGTGTTGCGCTTGCAGAACAATAATTTTTCTGGGTCCATTCCAGAGGCGCTCTTTCGACAGACCTCCATGGTGTTGACTGAACTTGACCTCAGCTGCAATCAACTTACAGGTCCAATTAGACGTGTAACATCAATGAACTTAAAGTACCTGAATCTGTCATCCAACAGCCTTCAGGGAACTTTGCCCATCACATTTGGGAGCTGTTCAGTTGTTGATCTGAGTAGAAACATGCTTTCAGGGAACCTATCAGTTATCCGAACTTGGGGAAATTATATTGAGACGGTCGATTTGACCTCAAATCGGTTAACAGGAACATGGCCAAATGAGACAACCCAGTTTTTGAGGTTGACTTCGTTGAGGATTTCCGACAACTTGCTTGCAGGAGAACTACCAACTGTTATTGGAACTTATCCTGAGCTGATTTCCATCGACTTGAGTCTCAATCAGCTTCATGGACCATTGCCTGGAAATCTGTTTACAGCAGTCAAACTGACCTATCTAAATCTGTCAGGAAACAGCTTTGCAGGGACTCTTCCTCTTCCTAATTCTGAAGCAAAGAGCTCAACTTTTATAGACTTGTTAGTTCTCCCTGTACAAACTTCAAACCTCTCATTTGTTGATCTTTCAAACAATTCTTTGAATGGTTCACTGCCTTCGGGCATTGGTGCTTTGAGTGGATTGGCATTACTGAACCTTTGCCAAAACAACTTTTCGGGGCAAATTCCGAGAGAAATCACCAAGCTAAAGCATTTGATATACATTGACTTATCAAAAAACAATTTCAATGGTACCATACCCGAGGACCTCCCTGATGATCTTGTTGAGTTCAATGTCTCCTACAACAATCTATCTGGCTCAGTTCCAAGCAACTTGTTGAAATTTCCTGATTCATCTTTCCATCCAGGAAATGAGCTGCTTGTTCTTCCTCATTCTGCATCACAAAATGGCCCTGACAGTTCTGGAGGGGGGAGACGCGGTATGAAACGTGGAATTCTATATGCATTGATTGTATGTGTTGTAGTCTTTGTTACTGGGATTATTGTGCTTTTGCTTGTTCATTGGAAGATCTCTAGCTGGAAGAGTAGTGAAAAAGGAACTAGCCAAAGCAAACAACCCGCAACTGTAGGAGAATGTTCACAGAGACAAGGAGAAGCTCCAACACCAGAAATGCAAGAAGTATCACTAGAATCATCATCATCTACAGAGTATGTAGGTAATCCTTTACCTGGTAAGGAAAGACAGCATGAAGCACAAGATGTGTCAGTTCATGCTGATCAAATAGGCAGTAGCTCCACCCTTAAAGACAATATGGCATCTTTGATGCCTCCATTGACATCGTCACCTCCTGATGTGCGCGCGCAGCATCAGCACTCTGTCCTGAGAGTCCACTCTCCTGATAAAATGGTTGGGGATTTACATCTTTTTGACAATCTTGTAGTGTTCACGGCCGAAGAGCTCTCCCGTGCTCCTGCAGAGATCATTGGTAGGAGTTGCCATGGGACATCCTACAAGGCTACACTTGACAATGGATATGCACTGACAGTAAAGTGGCTGAAGGAGGGATTTGCTAAGAGCAAGAAGGAATTTTCTCGTGAAATAAAGAAGCTTGGAACTGTTAAACATCCCAATTTAGTGTCCATGCGAGGCTACTACTGGGGTCCTAAAGAGCATGAAAGGATCATTATATCAGACTATGTAGATTCTACTTCTCTTTCTTCTTTCTTGTCTGAGTTTGAAGAACGGAATATTCCGCCTCTATCAGTGGACCAGCGTCTGAACATTGCAATTGACATTGCGCACTGTCTAGATTACCTACATAACGAGCGAGTGATCCCACACGGCAACCTGAAGTCATCCAATGTCCTGATCCAGAACGCAAGTCCATCTGCTTTGGTTACCGACTACAGCCTTCACAGGCTCATGACTCCAATCGGCATGGCCGAACAGGTCCTCAATGCAGGGGCCCTCGGATACTCTCCACCTGAGTTTGCTAGCTCCAGTAAGCCGTGCCCTTCCCTGAAGAGTGATGTGTATGCCTTCGGTGTCATTCTACTCGAGCTGCTGACAGGGAAGATTGCCGGGGAAATCGTTTGCGTGAACGATGGTGTGGTCGACTTGACGGACTGGGTAAGGATGCTAGCAAGGGAGGAGCGCGTTTCGGAGTGCTACGACAGGCGGATCATGGAAGCTCATGGCTCAGGTGGCGCCCCAAAGGCGCTGGAGGACATGCTGCGCATCGCCATCCGGTGCATCCGGTCTGCATCCGAAAGGCCGGAGATTCGGACAGTGTTTGAGGACCTCTCATCCCTGTCATCTTGA</cdnaseq>

Protein Sequence

<aaseq>MFSGQIPAELTKLANLGHLNLSSNGFGGALPLGLRNLRKLKYLDLRGNGFTGKLDDIFAELQSPVHVDLSCNRFSGSLISISDNSSVVSTLQYLNVSHNMLSGALFESDPMPLFDSLEVFDASYNMLEGNIPPFNFVISLKVLRLQNNNFSGSIPEALFRQTSMVLTELDLSCNQLTGPIRRVTSMNLKYLNLSSNSLQGTLPITFGSCSVVDLSRNMLSGNLSVIRTWGNYIETVDLTSNRLTGTWPNETTQFLRLTSLRISDNLLAGELPTVIGTYPELISIDLSLNQLHGPLPGNLFTAVKLTYLNLSGNSFAGTLPLPNSEAKSSTFIDLLVLPVQTSNLSFVDLSNNSLNGSLPSGIGALSGLALLNLCQNNFSGQIPREITKLKHLIYIDLSKNNFNGTIPEDLPDDLVEFNVSYNNLSGSVPSNLLKFPDSSFHPGNELLVLPHSASQNGPDSSGGGRRGMKRGILYALIVCVVVFVTGIIVLLLVHWKISSWKSSEKGTSQSKQPATVGECSQRQGEAPTPEMQEVSLESSSSTEYVGNPLPGKERQHEAQDVSVHADQIGSSSTLKDNMASLMPPLTSSPPDVRAQHQHSVLRVHSPDKMVGDLHLFDNLVVFTAEELSRAPAEIIGRSCHGTSYKATLDNGYALTVKWLKEGFAKSKKEFSREIKKLGTVKHPNLVSMRGYYWGPKEHERIIISDYVDSTSLSSFLSEFEERNIPPLSVDQRLNIAIDIAHCLDYLHNERVIPHGNLKSSNVLIQNASPSALVTDYSLHRLMTPIGMAEQVLNAGALGYSPPEFASSSKPCPSLKSDVYAFGVILLELLTGKIAGEIVCVNDGVVDLTDWVRMLAREERVSECYDRRIMEAHGSGGAPKALEDMLRIAIRCIRSASERPEIRTVFEDLSSLSS</aaseq>

Gene Sequence

<dnaseqindica>1..532#1058..2677#2779..3368#ATGTTCTCAGGTCAAATTCCGGCTGAATTGACTAAATTGGCTAATTTGGGACATCTCAATCTCTCTTCCAATGGTTTTGGTGGTGCATTGCCTTTGGGTCTCCGGAACTTAAGGAAACTGAAATATCTGGACCTTCGTGGCAATGGCTTTACTGGCAAATTGGATGACATATTTGCAGAATTACAGAGCCCGGTTCATGTTGATTTGAGCTGCAACCGGTTCTCGGGTTCATTGATATCAATATCTGACAACTCATCTGTGGTTAGCACACTTCAGTACTTGAATGTTAGCCACAATATGCTGTCAGGAGCATTATTTGAGAGTGATCCAATGCCTCTGTTTGATAGCCTGGAGGTGTTTGATGCAAGTTACAATATGCTTGAGGGCAATATTCCACCATTTAATTTTGTGATTTCCCTCAAGGTGTTGCGCTTGCAGAACAATAATTTTTCTGGGTCCATTCCAGAGGCGCTCTTTCGACAGACCTCCATGGTGTTGACTGAACTTGACCTCAGCTGCAATCAACTTACAGGTAAATCAGTTCTCCTACTATCCATCGCATGCTTCTCTTAAGAGGAATTATATTTAGTTCACGCTTTGATATGTAGCTTGTGCTGTGCTATCACAATTCCCTGGTGCTTGAACAGACAAATCATAGTGATTAGACATGAAAAATAAATGCATATTTCATTCATTCCATACTGTTTTGAACTACTCCTCCATTTCAAATTACTTGCATTTTAGCTTTGTACTAAATCAAACATTTCTATCTTTGACCATCGATGTCTAGGAATTCTTATAGTATAACACCATTTGAATTATATATTATGAAAGTATTTCTCAAGGTGAATCGAAAGACATGTCTTATGATGTTAAACTATATGAATTTCTAAAAGTTGATGGTCAAAGAGACAAAGACACAAATGTTTGACTTGGGACAAAACTAAAATGACAAGTAATTTGAAACGGAGGGAGTAGTTAATTGTTTCTAAACGATGTATTGCACTAACCAATCATGTGATTAACTCTAGTTTCTGAATTTTCTTGTCTTACACAGGTCCAATTAGACGTGTAACATCAATGAACTTAAAGTACCTGAATCTGTCATCCAACAGCCTTCAGGGAACTTTGCCCATCACATTTGGGAGCTGTTCAGTTGTTGATCTGAGTAGAAACATGCTTTCAGGGAACCTATCAGTTATCCGAACTTGGGGAAATTATATTGAGACGGTCGATTTGACCTCAAATCGGTTAACAGGAACATGGCCAAATGAGACAACCCAGTTTTTGAGGTTGACTTCGTTGAGGATTTCCGACAACTTGCTTGCAGGAGAACTACCAACTGTTATTGGAACTTATCCTGAGCTGATTTCCATCGACTTGAGTCTCAATCAGCTTCATGGACCATTGCCTGGAAATCTGTTTACAGCAGTCAAACTGACCTATCTAAATCTGTCAGGAAACAGCTTTGCAGGGACTCTTCCTCTTCCTAATTCTGAAGCAAAGAGCTCAACTTTTATAGACTTGTTAGTTCTCCCTGTACAAACTTCAAACCTCTCATTTGTTGATCTTTCAAACAATTCTTTGAATGGTTCACTGCCTTCGGGCATTGGTGCTTTGAGTGGATTGGCATTACTGAACCTTTGCCAAAACAACTTTTCGGGGCAAATTCCGAGAGAAATCACCAAGCTAAAGCATTTGATATACATTGACTTATCAAAAAACAATTTCAATGGTACCATACCCGAGGACCTCCCTGATGATCTTGTTGAGTTCAATGTCTCCTACAACAATCTATCTGGCTCAGTTCCAAGCAACTTGTTGAAATTTCCTGATTCATCTTTCCATCCAGGAAATGAGCTGCTTGTTCTTCCTCATTCTGCATCACAAAATGGCCCTGACAGTTCTGGAGGGGGGAGACGCGGTATGAAACGTGGAATTCTATATGCATTGATTGTATGTGTTGTAGTCTTTGTTACTGGGATTATTGTGCTTTTGCTTGTTCATTGGAAGATCTCTAGCTGGAAGAGTAGTGAAAAAGGAACTAGCCAAAGCAAACAACCCGCAACTGTAGGAGAATGTTCACAGAGACAAGGAGAAGCTCCAACACCAGAAATGCAAGAAGTATCACTAGAATCATCATCATCTACAGAGTATGTAGGTAATCCTTTACCTGGTAAGGAAAGACAGCATGAAGCACAAGATGTGTCAGTTCATGCTGATCAAATAGGCAGTAGCTCCACCCTTAAAGACAATATGGCATCTTTGATGCCTCCATTGACATCGTCACCTCCTGATGTGCGCGCGCAGCATCAGCACTCTGTCCTGAGAGTCCACTCTCCTGATAAAATGGTTGGGGATTTACATCTTTTTGACAATCTTGTAGTGTTCACGGCCGAAGAGCTCTCCCGTGCTCCTGCAGAGATCATTGGTAGGAGTTGCCATGGGACATCCTACAAGGCTACACTTGACAATGGATATGCACTGACAGTAAAGTGGCTGAAGGAGGGATTTGCTAAGAGCAAGAAGGAATTTTCTCGTGAAATAAAGAAGCTTGGAACTGTTAAACATCCCAATTTAGTGTCCATGCGAGGCTACTACTGGGGTCCTAAAGAGCATGAAAGGATCATTATATCAGACTATGTAGATTCTACTTCTCTTTCTTCTTTCTTGTCTGGTAAGATGATTTCTTCACTATCTTCATTTTTTAATTCTATATTTTTATGCTGAAGGAGTTCTTGAAAAGGTTCTGATACATCTCTATTATGATCTGCTCAGAGTTTGAAGAACGGAATATTCCGCCTCTATCAGTGGACCAGCGTCTGAACATTGCAATTGACATTGCGCACTGTCTAGATTACCTACATAACGAGCGAGTGATCCCACACGGCAACCTGAAGTCATCCAATGTCCTGATCCAGAACGCAAGTCCATCTGCTTTGGTTACCGACTACAGCCTTCACAGGCTCATGACTCCAATCGGCATGGCCGAACAGGTCCTCAATGCAGGGGCCCTCGGATACTCTCCACCTGAGTTTGCTAGCTCCAGTAAGCCGTGCCCTTCCCTGAAGAGTGATGTGTATGCCTTCGGTGTCATTCTACTCGAGCTGCTGACAGGGAAGATTGCCGGGGAAATCGTTTGCGTGAACGATGGTGTGGTCGACTTGACGGACTGGGTAAGGATGCTAGCAAGGGAGGAGCGCGTTTCGGAGTGCTACGACAGGCGGATCATGGAAGCTCATGGCTCAGGTGGCGCCCCAAAGGCGCTGGAGGACATGCTGCGCATCGCCATCCGGTGCATCCGGTCTGCATCCGAAAGGCCGGAGATTCGGACAGTGTTTGAGGACCTCTCATCCCTGTCATCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012519