BGIOSGA012531

From RiceWiki
Revision as of 09:48, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012531| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012531, complete gene.| tag = OsI_113...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA012531

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012531, complete gene.

LocusTag

OsI_11363

Ensembl Transcript ID

BGIOSGA012531-TA

Ensembl Protein ID

BGIOSGA012531-PA

Length

4080

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:13091043..13095122

Sequence Coding Region

13091043..13091146,13091600..13091696,13091942..13092220,13092423..13092962,13093208..13093318
,13093451..13093591,13093658..13093762,13093848..13093925,13094714..13094840
,13094911..13095122

Genome Context

<gbrowseImage1> name=IndicaChromosome03:13091043..13095122 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:13091043..13095122 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTTCCCCAACTTCACCGATGTCGCCGGCGCCGTCGTGCTCCTCTTCCTCGCCGACTCGTCGCCAGCGCCGTCCCCGCCTCCACCTCCTCCCACTGTTAGCAATGTCGACAGTCTTAGGGAATTCATAAAAGCTGTTTATGTGGAGAGAAGGTATGCTGGTGGAAGGTTTTCTGAAAGGCCTCCAAGAGATAAACAGAATCAAAAGAACAATGAACAAGAGCATAGAAGGGCTAGTTCGTACCATTCATTTTCTCAGAGCCCACCTTATGATTACCAATACGAAGAAAGACGCAATGGCAAGCAATCCGTGATGCTAACTAGGAAACCTGGTTCAGATAGGGGGCATGATGGGAAGATGTCTGGATTTGCTTACAGTCCACAGAGCCTGCATGAGAGGATGTCAGAAGACCGATTTGGCAATGAGAATTCTGGACCAAGAATTTCTGACTGCTCAGGGTCAAGCATCAGTAATACAAGAACTATATCAACAGGAAACATAGATTCGTCATCTACAAAATCAGGCAAATCAAGCTTAGCTGATATGTTTTTTGAATCTGATATTGCTCATAGAACTCAGCAAACGAAGGATTGCATTACTCCAAGTTTCACAGCTTTCTCTGATGTTGCCAACATTGCACAGAAAGATCTCCTTAATGAGCCTGTTGCGCAGCAACAACCTGTAACTGGTTTGGATCAACCAGTAGATTTTTTTGCTAGCATGCCTCTGGCAACTCCATCCACTGATAGAATGCTCACAGCAGCTCCATCAATGGACAATGCTGGGTGGGCTACATTTGACACACCACCAGAAGAAAAGCAACCTGGAGTGATTGGGCTTTCTGGCATTTCCGTAATGGATAAACATGCTTTGAGTGGTGATTTGTTTTCGTTTGAACCAAATAATGATCAACCAACGTGGCTCCAGAGCTCAAAGACCTCAAAAAATAATGCTTCTGTGACTGATCAGTCTGATGTACCTTGTAAATATACATCCTCTGATGCAAGTAATTCTCAGGCTTGGAGTGCTTTTGAGGCCAAAAGTGTTAGCACCCAACAAGCCTCGCCAGATCTTTCACTAATGAGTTCTATAGAACCTAAAGAACCAATTGATGAAAATAAATTGCAGCTCTGGCATTCATTCGATGATGCAAGTGAGACTATGACTCTCAATCTGTCCAATGCTCAGCTGCAAACTAATGAGCACAAGAATGTTGATAACAATTCCCTAACAACAAGCAATCCATTTACTTGCTCCATAACGTCAAAGGAATCTCGTGGTAATGATTCCCAAGAAATTTTCATGGGTGGATTAGCTCCTAGCGAACCCTTTGCTCCATTCCCTGAGCCATCACTGTTTGCTACTACTTCCGTGGGAGAAGCCTCTGTACAGCAGATGCCGTTGAATCCATTTGATCTTCCATTTGATGCTGACTCGGATTCTCCAGATATGTTTATGGATGTGACAGCGTTGCAAGCGGTTTTGCCTAATGCTGACCTATCAACTTCTTTCGTTGATGGTTTGCCGGAAACATGGTTCTCCAACAATGCGTCCGCTTATGTTCCACCGGGGTCACATGAGCTTGTGGGAGGTTTTAACGGCCCATGCATCTTCAGGTGGACCTCCATGCCTTGTCGAGCAAATCCCCAACTCTGCACTCAGGTAAGCTGCTTTGACCTGCTTCTGTCCAATATGGCATCACTTGCTATTCATCCATACGCTGAAATCAGCCTTGTTTATTTCAGGAACATAACATTGAGCGCTGTATCAACTGGAAATCCTTTTGCATAG</cdnaseq>

Protein Sequence

<aaseq>MAFPNFTDVAGAVVLLFLADSSPAPSPPPPPPTVSNVDSLREFIKAVYVERRYAGGRFSERPPRDKQNQKNNEQEHRRASSYHSFSQSPPYDYQYEERRNGKQSVMLTRKPGSDRGHDGKMSGFAYSPQSLHERMSEDRFGNENSGPRISDCSGSSISNTRTISTGNIDSSSTKSGKSSLADMFFESDIAHRTQQTKDCITPSFTAFSDVANIAQKDLLNEPVAQQQPVTGLDQPVDFFASMPLATPSTDRMLTAAPSMDNAGWATFDTPPEEKQPGVIGLSGISVMDKHALSGDLFSFEPNNDQPTWLQSSKTSKNNASVTDQSDVPCKYTSSDASNSQAWSAFEAKSVSTQQASPDLSLMSSIEPKEPIDENKLQLWHSFDDASETMTLNLSNAQLQTNEHKNVDNNSLTTSNPFTCSITSKESRGNDSQEIFMGGLAPSEPFAPFPEPSLFATTSVGEASVQQMPLNPFDLPFDADSDSPDMFMDVTALQAVLPNADLSTSFVDGLPETWFSNNASAYVPPGSHELVGGFNGPCIFRWTSMPCRANPQLCTQVSCFDLLLSNMASLAIHPYAEISLVYFRNITLSAVSTGNPFA</aaseq>

Gene Sequence

<dnaseqindica>1..104#558..654#900..1178#1381..1920#2166..2276#2409..2549#2616..2720#2806..2883#3672..3798#3869..4080#ATGGCGTTCCCCAACTTCACCGATGTCGCCGGCGCCGTCGTGCTCCTCTTCCTCGCCGACTCGTCGCCAGCGCCGTCCCCGCCTCCACCTCCTCCCACTGTTAGGTACTACTTCCGCGCAACACTCCCGTTTCTCCATTAGGTGTTCGGCGCGACGAGTCGGCAACGGAGACGGCCATCCGGGCGGCCGTCGGCGACAATGCTGGGACCAGCAAGGCCCTGCGCTTGTGAGTACCACACCGCCTCCAATTCCAATTTGAAGTGGTTTTGGAATGGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGTAAAAAGTTGTCACTATAGTGTTACCAGTATGGCGTTAGCCACTGAGAACACCTCCATTTTGTTGTCCTTTTTGTTTTTCACCTTTTATGCTTTGTTAATCGCTACTTCTTTATTATTTCAAGGGCATCCTTCTATCCTTCTCTTTTAAAGTTACCAATACATACTTTGTCTTGTGAATACATATATAGTGGGCACAGTACATGCTTACGCTAAACTATTTTTGCAGCAATGTCGACAGTCTTAGGGAATTCATAAAAGCTGTTTATGTGGAGAGAAGGTATGCTGGTGGAAGGTTTTCTGAAAGGCCTCCAAGAGATAAACAGGTATGTTTAGCTTAATTTACAACATCTAGTTAGTCTGCATGAGAACTGTTCTTTACCTGTCCATTTGTTATCACAAAGCTTTTGAATTTCTGCTTCAGTATGCGTAGATGACAATGAATACTTTTATAGAAGTTCATTCATGTTTTTTTTCCTGTGATTCTTGGGAAATTTTAAGTTTTCATTTTCTCAACGTATATTCTGGCAAAATGCTTCTCTCTTAACTAATTCATGTTCCATCAATGCAGAATCAAAAGAACAATGAACAAGAGCATAGAAGGGCTAGTTCGTACCATTCATTTTCTCAGAGCCCACCTTATGATTACCAATACGAAGAAAGACGCAATGGCAAGCAATCCGTGATGCTAACTAGGAAACCTGGTTCAGATAGGGGGCATGATGGGAAGATGTCTGGATTTGCTTACAGTCCACAGAGCCTGCATGAGAGGATGTCAGAAGACCGATTTGGCAATGAGAATTCTGGACCAAGAATTTCTGACTGCTCAGGGTCAAGCATCAGTAATACAGTTTGGAACGACACCACACTCACCGAATTTCCTTGATAAAGGGTGTTCCAGCCCCTCTATGCAACAAAATCAATCAAACATACAGGCTTCTAGTGGAATCACTCAATCTGAGGTGGTAAATATTCCACTCTAAACAAATAATTGGTTTTCCTTTCTTTTCATACCAAACAAGACATGTATTAATTTTGATTGCTTTCTGCAGAGAACTATATCAACAGGAAACATAGATTCGTCATCTACAAAATCAGGCAAATCAAGCTTAGCTGATATGTTTTTTGAATCTGATATTGCTCATAGAACTCAGCAAACGAAGGATTGCATTACTCCAAGTTTCACAGCTTTCTCTGATGTTGCCAACATTGCACAGAAAGATCTCCTTAATGAGCCTGTTGCGCAGCAACAACCTGTAACTGGTTTGGATCAACCAGTAGATTTTTTTGCTAGCATGCCTCTGGCAACTCCATCCACTGATAGAATGCTCACAGCAGCTCCATCAATGGACAATGCTGGGTGGGCTACATTTGACACACCACCAGAAGAAAAGCAACCTGGAGTGATTGGGCTTTCTGGCATTTCCGTAATGGATAAACATGCTTTGAGTGGTGATTTGTTTTCGTTTGAACCAAATAATGATCAACCAACGTGGCTCCAGAGCTCAAAGACCTCAAAAAATAATGCTTCTGTGACTGATCAGTCTGATGTACCTTGTAAATATACATCCTCTGATGCAAGTAATTCTCAGGTGAGGAATATTTGCATTGCTCTAGAAAAAACTTTTTTCATATGCTCTCATGTTAGGACATACATGCAACAAAATGCAGTCCATTCTTCAAAAAAATGGTCATTGTGTTTTTGCATGTATCATTTGCAAATGCACGAGAATTATTTTTTCATTTTTTTTAAAAAAAAAATCTGATTGTGCCACACTACTATGATATTCCACTTTTGCATTTAAACTTATAAATAGTATTTTTCACATTTCTTCAGGCTTGGAGTGCTTTTGAGGCCAAAAGTGTTAGCACCCAACAAGCCTCGCCAGATCTTTCACTAATGAGTTCTATAGAACCTAAAGAACCAATTGATGAAAATAAATTGCAGGTGAGTAAATTATGAAACTTGTGAATAAGCAAGTTATTTCCTGTTGCTGCAATGCTATTCTGGTATTTGACCTATCCTGTTAAGTGTCAACCGTTTCCCCAGAACTTAGTAGTGTCCCTTGTGTTTTTGCAGCTCTGGCATTCATTCGATGATGCAAGTGAGACTATGACTCTCAATCTGTCCAATGCTCAGCTGCAAACTAATGAGCACAAGAATGTTGATAACAATTCCCTAACAACAAGCAATCCATTTACTTGCTCCATAACGTCAAAGGTACCCCTTTCTTCTCAAGTAATTTTCATGGTCCTGAACAACCTAATATATTTTTCCATCATGTAGGAATCTCGTGGTAATGATTCCCAAGAAATTTTCATGGGTGGATTAGCTCCTAGCGAACCCTTTGCTCCATTCCCTGAGCCATCACTGTTTGCTACTACTTCCGTGGTAATTTAGATATTTAGCATATCTGTACACTTCTGCTGTTCCTTGAAGTGATTCTGGATCTGGAATATAATGCCACCGTTTACAGGGAGAAGCCTCTGTACAGCAGATGCCGTTGAATCCATTTGATCTTCCATTTGATGCTGACTCGGATTCTCCAGATATGGTATGCTATTCTTTTTTGCACATAGTAGCCAATAGGATCCAAAAATGGCAAACCAGTCAAACCACCGAGTCCTGTTTTTTGGCACCCCAGAAATCATATTGGCAACTTTAAATATTTAAATATGTAAAGGGAAAAATGACATTTAAAATGGAAGAGATAGAAACTGGAAGCAAACACCCGTGGCTTGGTTCATTTGCAATTTCCACTATGTTACAGAGTTATTTCTTCATTCCCTGCTTTCAATGCATTTGAGTATCAAGCATTTTATGGATGGTACTGTTGACATGATTGGAAGCTGTTAATATCGTTTTGTGCTACTGTCACTTACCTATCTACGGTGAATACTGTGGACTGAATATATGTTTAGAATTTGACGATGTGGAATAGACGTATTGATGATGAAACAGTAGATAACCCTTTCATAATTCTCATGGAGACGGACATGGCACCCACATGATCCAATATAGATGCAAAATACAGTTTCCAGAGTAGCATGTGTTGTGGATTGGCTAGGGTAAGGATCCGAAGACCGGGAGATAGGGCACTGGCCCTCTCCCTGCTGAGCTAAAAGAGGCTTCGAGGCTTTGATTTTTATATTTTGGGACGGAGGAAGTACTTATTTTCATACTGAAAACCGTGTAATCTGATTCTTTAATAATAAATGAATAATTATTGATTTACCTAGAGTCAGCATAACACATTCTTCAAAATGGACAGTCTGTTGTATGTAGTGCTGGTCAGCATGGCATTTTGCCCATCAGTTATCTGAACAGCACTCCATTTTGCAGTTTATGGATGTGACAGCGTTGCAAGCGGTTTTGCCTAATGCTGACCTATCAACTTCTTTCGTTGATGGTTTGCCGGAAACATGGTTCTCCAACAATGCGTCCGCTTATGTTCCACCGGGGTCACATGGTAAGCTTAACTCTGAGTCTCTGGCAACCATCTATCTACCTTCGCATAGCTTGTTCCTGCAAACATATAGAGCTTGTGGGAGGTTTTAACGGCCCATGCATCTTCAGGTGGACCTCCATGCCTTGTCGAGCAAATCCCCAACTCTGCACTCAGGTAAGCTGCTTTGACCTGCTTCTGTCCAATATGGCATCACTTGCTATTCATCCATACGCTGAAATCAGCCTTGTTTATTTCAGGAACATAACATTGAGCGCTGTATCAACTGGAAATCCTTTTGCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012531