BGIOSGA012554

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Revision as of 09:48, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012554| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012554, complete gene.| tag = OS03G03...")
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Gene Name

BGIOSGA012554

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012554, complete gene.

LocusTag

OS03G0330200

Ensembl Transcript ID

BGIOSGA012554-TA

Ensembl Protein ID

BGIOSGA012554-PA

Length

4330

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:13552697..13557026

Sequence Coding Region

13552697..13552855,13552948..13553075,13554564..13554714,13554822..13555025,13555518..13555942
,13556035..13556227,13556374..13556469,13556605..13556760,13556862..13557026

Genome Context

<gbrowseImage1> name=IndicaChromosome03:13552697..13557026 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:13552697..13557026 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGAGACGAGGCGGTGGGAGCTGGCGGCTCACCGGAGGCTGGAGAAGGGGAAGGTGGTGGGCGTGGTGGTGCTGGACGGCTGGGGCGAGGCGGCGCCGGATACCTTCAACTGCATCCACGTCGCCGACACCCCAACCCTCGACGCCCTCAAGAAGGGTGGTCCGGAGAGGTGGAGGGTGATCAAGGCTCACGGGACGGCGGTGGGGCTGCCTACGGACGACGACATGGGCAACAGTGAGGTTGGCCACAACGCGCTTGGAGCAGGCCAGATATATGCCCAGGGTGCAAAACTGGTAGATATGGCGCTAGCCTCTGGAAAGATATACGAGGGGGAAGGTTTTAAGTACATCCAACAGTCCTTCGAGAACGGTACTTTGCACCTCATTGGCTTGCTCAGCGATGGAGGAGTACATTCAAGGATTGATCAGCTGCAGCTGCTTCTAAAAGGAGCCAGTGAGCATGGAGCGAAAAGGATACGGGTTCATATACTTACAGATGGCCGTGATGTGTTGGACGGTAGCAGTGTCAAGTTTGTGGAATTGATTGAGAATGACCTTGCTAAATTACGGGATAAGGGTGTGGATGCAAGAATTGCATCTGGTGGTGGCAGGATGTATGTCACAATGGACCGTTATGAGAATGACTGGCAAGTTGTGAAGCGTGGTTGGGATGCACAGGTTCTCGGTGAAGCGCCACATAAGTTTCAAAACGCCCTTGAAGCTGTGAAGAAGCTCAGGGAGGATCCAAAGGCCAATGACCAGTATTTACCGCCATTTGTTATAGTTGACGAAAGAGGAAGACCGATTGGCCCTATAATGGATGGGGATGCTGTTGTGACATTTAATTTCAGAGCAGACAGGATGGTCATGCTTGCAAAGGCACTAGAATACGAGAGTTTTGACAAATTTGATCGTGTCAGGTTCCCCAAGATTCGCTATGCCGGTATGCTTCAGTACGACGGTGAGCTAAAACTTCCGAGCCATTTTCTTGTTGCTCCCCCAGAGATAGAGAGAACGTCTGGCGAATACTTAGCGCGCAATGGCATACGCACATATGCTTGCAGTGAGACAGTCAAATTTGGTCACGTCACTTTTTTCTGGAATGGAAACCGGTCTGGCTACTTCCACCCAAACCTGGAAAAATACGAAGAAATTCCAAGTGACATTGGTATCCCCTTCAATGAACAGCCAAAAATGAAGGCCGTGGAAATTGCGAAGAAGACAAGGGATGCCATCCTGAGTCGCAAATTTGATCAGGTAAGGGTAAACATCGCAAATGGAGATATGGTTGGTCACACAGGCGACATTGAAGCTACTATCGTTGGGTGCAAGGCAGCTGATGAAGCTGTTAAGATTGTTCTCGATGCGATAGAACAAGTAGGTGGCATTTTCGTGGTCACCGCAGACCATGGCAATGCGGAGGACATGGTGAAAAGAGATAAATCTGGCAAACCGCTTCGCGACAAGGATGGAAATGTCCAGCCCCTCACCTCACACACTTTGAATCCAGTTCCCATCGCCATTGGAGGCCCTGGCCTTCAACCAGGGGTAAGATTTCGGTCAGATCTCCCCAGTGCCGGCCTTGCCAACGTTGCGGCAACAGTCATGAATCTTCATGGCTTCGAGGCCCCAGATCACTATGAGCCTACGCTGATCGAAGTTGTCGACAAATGA</cdnaseq>

Protein Sequence

<aaseq>MAETRRWELAAHRRLEKGKVVGVVVLDGWGEAAPDTFNCIHVADTPTLDALKKGGPERWRVIKAHGTAVGLPTDDDMGNSEVGHNALGAGQIYAQGAKLVDMALASGKIYEGEGFKYIQQSFENGTLHLIGLLSDGGVHSRIDQLQLLLKGASEHGAKRIRVHILTDGRDVLDGSSVKFVELIENDLAKLRDKGVDARIASGGGRMYVTMDRYENDWQVVKRGWDAQVLGEAPHKFQNALEAVKKLREDPKANDQYLPPFVIVDERGRPIGPIMDGDAVVTFNFRADRMVMLAKALEYESFDKFDRVRFPKIRYAGMLQYDGELKLPSHFLVAPPEIERTSGEYLARNGIRTYACSETVKFGHVTFFWNGNRSGYFHPNLEKYEEIPSDIGIPFNEQPKMKAVEIAKKTRDAILSRKFDQVRVNIANGDMVGHTGDIEATIVGCKAADEAVKIVLDAIEQVGGIFVVTADHGNAEDMVKRDKSGKPLRDKDGNVQPLTSHTLNPVPIAIGGPGLQPGVRFRSDLPSAGLANVAATVMNLHGFEAPDHYEPTLIEVVDK</aaseq>

Gene Sequence

<dnaseqindica>1..159#252..379#1868..2018#2126..2329#2822..3246#3339..3531#3678..3773#3909..4064#4166..4330#ATGGCGGAGACGAGGCGGTGGGAGCTGGCGGCTCACCGGAGGCTGGAGAAGGGGAAGGTGGTGGGCGTGGTGGTGCTGGACGGCTGGGGCGAGGCGGCGCCGGATACCTTCAACTGCATCCACGTCGCCGACACCCCAACCCTCGACGCCCTCAAGAAGGTAGTAACAACGCTAACAAGACGTTTGTTTGATGCTTCCCATGATGATCAGCTGAGAGCGAGACTTGTGTGTGTGTGTTCTGGCGCGTGCAGGGTGGTCCGGAGAGGTGGAGGGTGATCAAGGCTCACGGGACGGCGGTGGGGCTGCCTACGGACGACGACATGGGCAACAGTGAGGTTGGCCACAACGCGCTTGGAGCAGGCCAGATATATGCCCAGGGGTAATACTAGTTTTAGGGTCTCTTTGAATGGGAGAAAAAACATAAAAATTTTAGAGGATTTCAATTCTATATGAAATATAGAATTTCATATGAAGCCCTTTAAAACAAATTGAATCCTATCCAATCCTTTGAAATTCCTTTGGAATGGACAATTTTATAGAGATTTTGGAGAAAATTTAGCAAGAGCTTCAATCTTTTGGTAACTTTCCTTTGAGTCTATCTCTCTCATCTAATTCCTACGTTTTTCCTGCGGTTCAATCAAACGGTCATTCCTGTGTTTTTCCTGCGTTTTGCAATCCTCTGTTTTCCACTTACATTTCTATCAAAATCCTACGTTTTTCCTATTCCTACATTTTTTTTCAATCCTGCGATTCAAAGGAGCCCTTTACTGTACTAGTATAGTAGCATAGCAGCAATCTCTGCTTGATTTCTGGTTTTCTGCATGTACCTGCAATTCTGTTACTCTGCATATTACTCCCTCGATCCTAAAATATAAGCGATTTTAGATAAATAGAACATATCCTAATATTATGGATCTAGATAGTAGAGTCCGTTCAGATTCATAGTATTAGGATATGTCCCATGCATCCATAAAAAATACCTTATATTTGGAACGGAGGGAGTAGTATATACACCAGAAAAATGCATGTTGGGTTGTTCAGGCTAACTAGATACTCCCTCTATCCTATAATAATTTCATTTTTCGTGCTTTCCGTTTGTACTAAAATAATAAGTTCATTATTTAGCGATCACGGAGTTTATAAAATTAGGGGATAAATATATTAGGAGTAGATGAAGTAGAAAATAATTGCATTGAGATTTGATAAAGTAAGAGTATTATAGTTTATTTTTGTTTTTTATTGATATATGTGCGATAGATGAAAAATGAAAGACGGATGAAGTAGAACGTAATTTACTTTTCAACCTGCTGTAAATATCTTCTGAAGTAAGGCTTGTTCATTTAAGATGGTTAATGTCTCTAATTCTCTAGGTCCACATTCACACCCTCCAGTGACAGTATGTAGTAATGCAGCCCAGTTGCACAGGGACCTAGCTGTTGAATGCTGAATCTTAACTCTTTTATTATGAATAATTTTATCTCACTACTCTTCTTCCTGGACAAGTCTCTCTGTTTTAAAATATAAGATGTATTAGACTTTTACAGGGTCTCCAATATTATACTTTGACCGTTTATGTAAAAATATGTATATTTTGACCATTGATTTCTTTCATAATTTGTTATCAATAACTATGAAATTAATATCAGATGGAAATATTTGAAATATGAATCTAATGTCAAAATTTTCAATGTTGAATTTCCGAATCACAAGGAGTCTTATATTTTAGAACAGAGGAGTACTATCATGCGTGAGTATGACCAGCTTTAATCACCTTAACCTGATTGTTCCAAAAACTACGGTAGCATGGATGAGTGTTGCATGCACATCTCAAATGCAAGGTTACTGATCAGTTGCTGACAATGCGCAGTGCAAAACTGGTAGATATGGCGCTAGCCTCTGGAAAGATATACGAGGGGGAAGGTTTTAAGTACATCCAACAGTCCTTCGAGAACGGTACTTTGCACCTCATTGGCTTGCTCAGCGATGGAGGAGTACATTCAAGGATTGATCAGCTGCAGGTTGATATAATTAAATTTCAAATTCCATCCGTCGATCAGTTGTAGTTGAGTAGTAGTACAACTATCTCAGTTTCTCTTGTTAATGTTCTTTTGGTGGGCTCTTGCAGCTGCTTCTAAAAGGAGCCAGTGAGCATGGAGCGAAAAGGATACGGGTTCATATACTTACAGATGGCCGTGATGTGTTGGACGGTAGCAGTGTCAAGTTTGTGGAATTGATTGAGAATGACCTTGCTAAATTACGGGATAAGGGTGTGGATGCAAGAATTGCATCTGGTGGTGGCAGGATGTATGTCACAATGGACCGTTATGAGGTATTTTCTCCGTTTCATATTATAAATCGTTTTGACTTTTTTTATAAATCAAACTTCTTTAACTTTAACCAAATTTATAGAGAAATATAACAATATTTTTAACATAAAATAAAGAAACTATCAAAATATATTCAATGTTGGATCTAATAGTTTACACAAAATAATGTTGGATCTAAAATAACTAATTTAGTGCTATAAATATTACTATATTTTTCTATAAGCTTGGTCAAATTTCAAGAGATTTGACTTTAAAAAAGTCAAAACAACTTATAATATGATAACGGAGGGAGTATGTGTCAAGCATTTGAATTCAGAGTTCAGTTACTACTCCGGGAACTCATTATATCTTACCACTTATGTTGCATATGCTAGCTGCATTTCTTAACATAAGAGGTTGTCCGAAGCTAGCTGCTCAATACTTGCCTTTTGTAATGTCATGGCACAATTTTCTCTGCGCCAAAAATATGATTGAAATTTTCACTGGTTCTGCAGAATGACTGGCAAGTTGTGAAGCGTGGTTGGGATGCACAGGTTCTCGGTGAAGCGCCACATAAGTTTCAAAACGCCCTTGAAGCTGTGAAGAAGCTCAGGGAGGATCCAAAGGCCAATGACCAGTATTTACCGCCATTTGTTATAGTTGACGAAAGAGGAAGACCGATTGGCCCTATAATGGATGGGGATGCTGTTGTGACATTTAATTTCAGAGCAGACAGGATGGTCATGCTTGCAAAGGCACTAGAATACGAGAGTTTTGACAAATTTGATCGTGTCAGGTTCCCCAAGATTCGCTATGCCGGTATGCTTCAGTACGACGGTGAGCTAAAACTTCCGAGCCATTTTCTTGTTGCTCCCCCAGAGATAGAGAGAACGTCTGGCGAATACTTAGCGCGCAATGGCATACGCACATATGCTTGCAGGTACAATACTGTTCATTATCTTGTCGAAAGTGTTTGCTCCGAGTGTTGGTACTTGAGCATGCAGCTTCATATCTTGTCATTCTAATTTTCAGTGAGACAGTCAAATTTGGTCACGTCACTTTTTTCTGGAATGGAAACCGGTCTGGCTACTTCCACCCAAACCTGGAAAAATACGAAGAAATTCCAAGTGACATTGGTATCCCCTTCAATGAACAGCCAAAAATGAAGGCCGTGGAAATTGCGAAGAAGACAAGGGATGCCATCCTGAGTCGCAAATTTGATCAGGTATTTAACAAATAAATTCCTTCAGAAGAACGAACAAAGAGCTCATAGGCCATGCATCGGGTAGACTTCAGATAGATAGGGCGTGATAATTGTTACTAGCAGCTAATCCACTTAATAGGCCTAATGTTATTTTGGTCATTTGTTAGGTAAGGGTAAACATCGCAAATGGAGATATGGTTGGTCACACAGGCGACATTGAAGCTACTATCGTTGGGTGCAAGGCAGCTGATGAAGCTGTTAAGGTGATCATGTCTGCAGTGCTCTCTCTCTTTTCAGTCTTTTAACAATTGATAGGCCACCAATTCACCATTCAGTCTTGTATGCATGATTTTCACTGTTTGAAAATACTCATGGTGGACCGGAATTCTCTTATTCAGATTGTTCTCGATGCGATAGAACAAGTAGGTGGCATTTTCGTGGTCACCGCAGACCATGGCAATGCGGAGGACATGGTGAAAAGAGATAAATCTGGCAAACCGCTTCGCGACAAGGATGGAAATGTCCAGCCCCTCACCTCACACACTTTGAATCCAGTAGGCTCACTTCTAGATCTGCTTTGCTTTGCAATGCACCGTGTTAACAATATTAGGATGCAGTTGCTGTTTAGGACCTCACTTTCTGAAACCATCTGCAGGTTCCCATCGCCATTGGAGGCCCTGGCCTTCAACCAGGGGTAAGATTTCGGTCAGATCTCCCCAGTGCCGGCCTTGCCAACGTTGCGGCAACAGTCATGAATCTTCATGGCTTCGAGGCCCCAGATCACTATGAGCCTACGCTGATCGAAGTTGTCGACAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012554