BGIOSGA012556

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Revision as of 09:48, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012556| Description = BGIOSGA012556| Definition = Oryza sativa Indica Group BGIOSGA012556, complete gene.| tag = | tid = BGIOSGA012556-TA|...")
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Gene Name

BGIOSGA012556

Description

BGIOSGA012556

Definition

Oryza sativa Indica Group BGIOSGA012556, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA012556-TA

Ensembl Protein ID

BGIOSGA012556-PA

Length

2239

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:13573845..13576083

Sequence Coding Region

13573845..13574003,13574096..13574223,13574834..13574984,13575092..13575295,13575544..13576083

Genome Context

<gbrowseImage1> name=IndicaChromosome03:13573845..13576083 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:13573845..13576083 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGAGACGAGGCGGTGGGAGCTGGCGGCTCACCGGAGGCTGGAGAAGGGGAAGGTGGTGGGCGTGGTGGTGCTGGACGGCTGGGGCGAGGCGGCGCCGGATACCTTCAACTGCATCCACGTCGCCGACACCCCAACCCTCGACGCCCTCAAGAAGGGTGGTCCGGAGAGGTGGAGGGTGATCAAGGCTCACGGGACGGCGGTGGGGCTGCCTACGGACGACGACATGGGCAACAGTGAGTTTGGCCACAACGCGCTTGGAGCAGGCCAGATATATGCCCAGGGTGCAAAACTGGTAGATATGGCGCTAGCCTCTGGAAAGATATACGAGGGGGAAGGTTTTAAGTACATCCAACAGTCCTTCGAGAACGGTACTTTGCACCTCATTGGCTTGCTCAGCGATGGAGGAGTACATTCAAGGATTGATCAGCTGCAGCTGCTTCTAAAAGGAGCCAGTGAGCATGGAGCGAAAAGGATACGGGTTCATATACTTACAGATGGCCGTGATGTGTTGGACGGTAGCAGTGTCAAGTTTGTGGAATTGATTGAGAATGACCTTGCTAAATTACGGGATAAGGGTGTGGATGCAAGAATTGCATCTGGTGGTGGCAGGATGTATGTCACGATGGACCGTTATGAGTGGATGGGGATGGTGGCGGCGGCGAATAGCAAGGCGGCGGAGGCCGCGCGAATCCACGCCGCGCCGCCCAAATCCGGTGGGGACGGCGGATCCTCCTCCCGAATCTATGCTGCGCCGCCCGAATCCACATCGCGCCGGTGGGGACGGAGGCAACGGAGGTCGGCCGCCGCCAGATCCAGACGACGGCAACGGCAACCACGGGGACAACTGGCGATGGTGCAGACGAAGGTGACAGCGGCTAGCGACCTCGACAACGATGGTGGCGCTCTGGCATGGGTTCAAGACACTCGCTGTCGTGCTCTCCGCCGCCGGCTCCCCAACAACCCCGCCACGGCCCCCTCCTCGCCGGCGGCGGCGGCCCAGCGCTCGTGGTCGAGGAGCTCCGCCGCACCATCCTGGAGATGCAGGCGGCGCACGGAAGCCGGTGCTAGCGGTGGTGCACGGCGCTGCATCGGCGGCGGCGTCGAGTCTTGCCGCCTGCGCCATCCGGCCAAAGGAGGGGGTTGGGAGNCCAGTGATTTTCTGGCTGGCCANAATTAG</cdnaseq>

Protein Sequence

<aaseq>MAETRRWELAAHRRLEKGKVVGVVVLDGWGEAAPDTFNCIHVADTPTLDALKKGGPERWRVIKAHGTAVGLPTDDDMGNSEFGHNALGAGQIYAQGAKLVDMALASGKIYEGEGFKYIQQSFENGTLHLIGLLSDGGVHSRIDQLQLLLKGASEHGAKRIRVHILTDGRDVLDGSSVKFVELIENDLAKLRDKGVDARIASGGGRMYVTMDRYEWMGMVAAANSKAAEAARIHAAPPKSGGDGGSSSRIYAAPPESTSRRWGRRQRRSAAARSRRRQRQPRGQLAMVQTKVTAASDLDNDGGALAWVQDTRCRALRRRLPNNPATAPSSPAAAAQRSWSRSSAAPSWRCRRRTEAGASGGARRCIGGGVESCRLRHPAKGGGWEXSDFLAGXN</aaseq>

Gene Sequence

<dnaseqindica>1..159#252..379#990..1140#1248..1451#1700..2239#ATGGCGGAGACGAGGCGGTGGGAGCTGGCGGCTCACCGGAGGCTGGAGAAGGGGAAGGTGGTGGGCGTGGTGGTGCTGGACGGCTGGGGCGAGGCGGCGCCGGATACCTTCAACTGCATCCACGTCGCCGACACCCCAACCCTCGACGCCCTCAAGAAGGTAGTAACAACGCTAACAAGACGTTTGTTTGATGCTTCCCATGATGATCAGCTGAGAGCGAGACTTGTGTGTGTGTTTTCTGGCGCGTGCAGGGTGGTCCGGAGAGGTGGAGGGTGATCAAGGCTCACGGGACGGCGGTGGGGCTGCCTACGGACGACGACATGGGCAACAGTGAGTTTGGCCACAACGCGCTTGGAGCAGGCCAGATATATGCCCAGGGGTAATACTAGTTTTAGGGCCCCTTTGAATTGGAGGAAAAACATATAAAAATTTTAGAGGATTTTAATTCTATAGGAAATATAGAATTTCCTATGAAGCCCTTTGAAACAAAGGATTGAATCATATCCAATCCTTTGAAATTCCTATGGAATGGACTATCTTATAGAGATTTTGGAGAAAATTTAGCAAGAGCTTCAATCTTTTGGTAACTTTCCTTTGAGTCTATCGTCTCTCATCCANTTCCTGCGTTTTTCCTGCGGTTCAATCAAACGGTCATTCCTGTGTTTTTCCTGCGTTTTGCATCCTCTGTTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCAATAACTATGAAATTAATATCAGATGGAAATATTTGAAATATGAATCTAATGTCAAAATTTTCAATGTTGAATTTCCGAATCACAAGGAGTCTTATATTTTAGAACAGAGGAGTACTATCATGCGTGAGTATGACCAGCTTTAATCACCTTAACCTGATTGTTCCAAAAACTACGGTAGCATGGATGAGTGTTGCATGCACATCTCAAATGCCAAGTTACTGATCAGTTGCTGACAATGCGCAGTGCAAAACTGGTAGATATGGCGCTAGCCTCTGGAAAGATATACGAGGGGGAAGGTTTTAAGTACATCCAACAGTCCTTCGAGAACGGTACTTTGCACCTCATTGGCTTGCTCAGCGATGGAGGAGTACATTCAAGGATTGATCAGCTGCAGGTTGATATAATTAAATTTCAAACTTCATCCGTCGATCAGTTGTAGTTGAGTAGTAGTACAACTATCTCAGTTTCTCTTGTTAATGTTCTTTTGGTGGGCTCTTGCAGCTGCTTCTAAAAGGAGCCAGTGAGCATGGAGCGAAAAGGATACGGGTTCATATACTTACAGATGGCCGTGATGTGTTGGACGGTAGCAGTGTCAAGTTTGTGGAATTGATTGAGAATGACCTTGCTAAATTACGGGATAAGGGTGTGGATGCAAGAATTGCATCTGGTGGTGGCAGGATGTATGTCACGATGGACCGTTATGAGGTATTTTCTCCGTTTCATATTATAAATCGTTTTGACTATTTTATAAATCAAACTTCTTTAACTTTAACCAAATTTATAGAGAAATATAACAATATTTTTAACATAAAATAAAGAAACTATCAAAATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTAGATTTTCTCCCCCCTCCTCCTCTTCCTCAACAGTGGCGAATGGAAACGACGACGGTTACCGTAGTGGATGGGGATGGTGGCGGCGGCGAATAGCAAGGCGGCGGAGGCCGCGCGAATCCACGCCGCGCCGCCCAAATCCGGTGGGGACGGCGGATCCTCCTCCCGAATCTATGCTGCGCCGCCCGAATCCACATCGCGCCGGTGGGGACGGAGGCAACGGAGGTCGGCCGCCGCCAGATCCAGACGACGGCAACGGCAACCACGGGGACAACTGGCGATGGTGCAGACGAAGGTGACAGCGGCTAGCGACCTCGACAACGATGGTGGCGCTCTGGCATGGGTTCAAGACACTCGCTGTCGTGCTCTCCGCCGCCGGCTCCCCAACAACCCCGCCACGGCCCCCTCCTCGCCGGCGGCGGCGGCCCAGCGCTCGTGGTCGAGGAGCTCCGCCGCACCATCCTGGAGATGCAGGCGGCGCACGGAAGCCGGTGCTAGCGGTGGTGCACGGCGCTGCATCGGCGGCGGCGTCGAGTCTTGCCGCCTGCGCCATCCGGCCAAAGGAGGGGGTTGGGAGNCCAGTGATTTTCTGGCTGGCCANAATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012556