BGIOSGA012569

From RiceWiki
Revision as of 09:49, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012569| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012569, complete gene.| tag = OS03G03...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA012569

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012569, complete gene.

LocusTag

OS03G0334700

Ensembl Transcript ID

BGIOSGA012569-TA

Ensembl Protein ID

BGIOSGA012569-PA

Length

3835

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:13789418..13793252

Sequence Coding Region

13789418..13789703,13789976..13790306,13790445..13791300,13791493..13791616,13792202..13792421
,13792504..13792962,13793051..13793252

Genome Context

<gbrowseImage1> name=IndicaChromosome03:13789418..13793252 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:13789418..13793252 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATACCGATATCACTATACATCACCATGGAGTTAGTCAGAGTGGGGCAGTCATACTTTATGATTGGAGATACACGGATGTATGACAGTAGTTCAGGTTCAAGATTTCAATGCCGGTCCTTGAATATCAATGAAGATCTCGGTCAAATACGTTACATATTTTCTGATAAAACGGGTACCTTGACACAAAACAAGATGGAGTTTCATCAAGCCAGCATCTACGGGAAGAACTATGGGAGCCCCTTGCAGGTCACTGGTGACTCATCTTATGAAATAAGCACAACAGAGTCATCGAGACAGCAAGGCAGTAAGTCCAAGTCAGGAGTCAATGTTGATGCAGAACTCATAGCACTTCTGAGTCAACCATTGGTTGGAGAGGAAAGACTTTCTGCCCATGATTTTTTTCTTACTTTAGCTGCATGCAATACAGTCATTCCAGTCAGCACAGAAAATTCTCTCGATTTGGTTAATGAAATAAATGAGATAGGCAGAATTGATTACCAGGGTGAATCACCTGATGAGCAGGCCTTAGTAACTGCAGCTTCTGCTTATGGATATACGCTTGTGGAAAGGACAACTGGCCACATTGTTGTTGATGTTCAGGGGGAGAAGATAAGGCTGGATGTTCTTGGTCTCCATGAATTTGACAGCGTGAGAAAAAGGATGTCTGTCGTTGTACGATTTCCAGACAACATTGTGAAGGTTCTTGTTAAGGGTGCTGATACTTCAATGCTTAGCATTTTGAGGAGAGAAGATGATGATGAACTTCACAATTCTTTGCATGCTAAAATTAGAGAAACTACAGAAAACCACTTGTCAGGTTACTCATCAGAGGGTTTACGAACCTTAGTAATTGGTTCAAAGAACCTGACTGATGCAGAATTTGGTGAGTGGCAAGAAAGGTATGAAGAAGCCAGCACCTCCATGACAGAGAGATCAGCAAAGCTCCGACAGGCGGCAGCTCTTGTTGAGTGCAATCTGACTCTTCTTGGTGCAACTGGAATTGAAGATAAGTTGCAGGATGGTGTTCCTGAGGCCATTGAGTCTCTCCGGCAGGCTGGAATCAAGGTTTGGGTTCTCACCGGAGATAAGCAAGAAACTGCTATATCGATTGGTCTGTCATGTAGACTATTGACTCAAAATATGCATTTGATTGTTATAAATGGATCCTCAGAGTTTGAGTGCAGGCGCCTTCTAGCTGATGCTAAAGCCAAATTTGGAATAAAGTCATCTGATTCTGGGAGGGATTGTCAAGATATCGAACATACGCACAATGGTGACGTTTCTAAGTTGAGGACCTCTAATGGTCACATGTCTGAAAGTGGCATACATAACTTCGAGCTGACTGGAGTTATTGCAAGTGACAAGTCAGAATACTCTGAGAAAGTGGCAAATTTTGCTGACACTGATCTAGCATTGGTAATTGATGGGAGCTCCCTGGTGTATATTTTAGAGAAGGATCTTGAATCAGAGTTGTTTGATCTGGCGACTTCCTGTAAAGTTGTTATCTGCTGCCGTGTTGCTCCACTACAAAAGGCTGGAATTGTTGATTTGATTAAAAGCAGAACAAGTGACATGACCCTGGCAATTGGTGATGGGGCAAATGATGTTTCAATGATACAGATGGCAGATGTTGGTGTTGGAATATGTGGTCAAGAAGGTCGTCAAGCAGTGATGGCATCAGATTTTGCCATGGGACAGTTCCGCTTTCTGAAGAGATTACTTCTTGTACATGGACACTGGAATTATCAGCGTATTGCATACATGATCCTCTACAATTTTTACCGAAATGCTGTTTTTGTGCTAATGTTGTTCTGGTATATCTTGCATACAGCATATTCTGCAACTCTTGCATTAACAGATTGGAGTAGTGTTTTCTATTCCCTTATCTATACGTCAATTCCCACAGTGGTAGTTGGCATTCTGGACAAGGACTTGAGTCATAATACTCTACTTCATTATCCGAGACTATATGAAACAGGGCTTCAGAATGAGGGCTACAACTTGACGCTCTTCTGGATCACAATGCTAGATACCTTGTGGCAAAGCCTTGTCCTTTTCTATGTTCCCTTCTTCACATACAATATCAGTACAATGGACATATGGAGTATGGGAAGCTTGTGGACGATTGCTGTGGTTATACTTGTCAATATTCATTTGGCCATGGATATCCAACGTTGGGTGCTTATAACCCATCTTGCTGTATGGGGCTCTATAGCTGCAACATTTTTGTGCATGGTGTTAATAGATTCTATTCCAATATTCCCTAACTATGGGACAATATACAATATGGCTGCTTCAAGAACTTATTGGCTTAGTGTTTGCCTTATAATAGTCCTAGGCTTGCTTCCTCGGTTTCTTTGCAAAGTAATCTATCAGACCTTTTGGCCATCTGATATTCAAATAGCAAGAGAAGCTGAGTTATTAAAAAAGCTACCCCGGCAGTTGGGTTCAAGGCCTGCAAGTGATATCAGCTGA</cdnaseq>

Protein Sequence

<aaseq>MIPISLYITMELVRVGQSYFMIGDTRMYDSSSGSRFQCRSLNINEDLGQIRYIFSDKTGTLTQNKMEFHQASIYGKNYGSPLQVTGDSSYEISTTESSRQQGSKSKSGVNVDAELIALLSQPLVGEERLSAHDFFLTLAACNTVIPVSTENSLDLVNEINEIGRIDYQGESPDEQALVTAASAYGYTLVERTTGHIVVDVQGEKIRLDVLGLHEFDSVRKRMSVVVRFPDNIVKVLVKGADTSMLSILRREDDDELHNSLHAKIRETTENHLSGYSSEGLRTLVIGSKNLTDAEFGEWQERYEEASTSMTERSAKLRQAAALVECNLTLLGATGIEDKLQDGVPEAIESLRQAGIKVWVLTGDKQETAISIGLSCRLLTQNMHLIVINGSSEFECRRLLADAKAKFGIKSSDSGRDCQDIEHTHNGDVSKLRTSNGHMSESGIHNFELTGVIASDKSEYSEKVANFADTDLALVIDGSSLVYILEKDLESELFDLATSCKVVICCRVAPLQKAGIVDLIKSRTSDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRIAYMILYNFYRNAVFVLMLFWYILHTAYSATLALTDWSSVFYSLIYTSIPTVVVGILDKDLSHNTLLHYPRLYETGLQNEGYNLTLFWITMLDTLWQSLVLFYVPFFTYNISTMDIWSMGSLWTIAVVILVNIHLAMDIQRWVLITHLAVWGSIAATFLCMVLIDSIPIFPNYGTIYNMAASRTYWLSVCLIIVLGLLPRFLCKVIYQTFWPSDIQIAREAELLKKLPRQLGSRPASDIS</aaseq>

Gene Sequence

<dnaseqindica>1..286#559..889#1028..1883#2076..2199#2785..3004#3087..3545#3634..3835#ATGATACCGATATCACTATACATCACCATGGAGTTAGTCAGAGTGGGGCAGTCATACTTTATGATTGGAGATACACGGATGTATGACAGTAGTTCAGGTTCAAGATTTCAATGCCGGTCCTTGAATATCAATGAAGATCTCGGTCAAATACGTTACATATTTTCTGATAAAACGGGTACCTTGACACAAAACAAGATGGAGTTTCATCAAGCCAGCATCTACGGGAAGAACTATGGGAGCCCCTTGCAGGTCACTGGTGACTCATCTTATGAAATAAGCACAACAGGTAAGATCACTGTCTTTGGACAAATATCAGCGTGTATTTGGTTTATGAATATTGGACAAATTGTTCCTCAGGTTGAATGACTAATGGATGCTTAATTCGTGTGTACAAAAAAACATTGTTCCTATATACCATATAATTGCACGCTTCAAACTGTGAAAATAGTAGACATTTATATGCAGCTCTTTCCATTTATTTATTCTCACTTATGCTCTTACCTCAGATAGGATTTTAATCATTTACCTATTGATGCTTAAGTCTCTGTCTCTTTGCAGAGTCATCGAGACAGCAAGGCAGTAAGTCCAAGTCAGGAGTCAATGTTGATGCAGAACTCATAGCACTTCTGAGTCAACCATTGGTTGGAGAGGAAAGACTTTCTGCCCATGATTTTTTTCTTACTTTAGCTGCATGCAATACAGTCATTCCAGTCAGCACAGAAAATTCTCTCGATTTGGTTAATGAAATAAATGAGATAGGCAGAATTGATTACCAGGGTGAATCACCTGATGAGCAGGCCTTAGTAACTGCAGCTTCTGCTTATGGATATACGCTTGTGGAAAGGACAACTGGCCACATTGTTGTTGATGTTCAGGGGGAGAAGATAAGGTATATACTGCATACTTTTTTCTCGACGATAACATTTCCTGTACCATTCATTTCATCTTCAGTTTACTATTAAATGCATTTTTTACTGTTGAGAATTTTCTGTCTGTTATTTAATATTTAATTTTACTGTCATAACAGGCTGGATGTTCTTGGTCTCCATGAATTTGACAGCGTGAGAAAAAGGATGTCTGTCGTTGTACGATTTCCAGACAACATTGTGAAGGTTCTTGTTAAGGGTGCTGATACTTCAATGCTTAGCATTTTGAGGAGAGAAGATGATGATGAACTTCACAATTCTTTGCATGCTAAAATTAGAGAAACTACAGAAAACCACTTGTCAGGTTACTCATCAGAGGGTTTACGAACCTTAGTAATTGGTTCAAAGAACCTGACTGATGCAGAATTTGGTGAGTGGCAAGAAAGGTATGAAGAAGCCAGCACCTCCATGACAGAGAGATCAGCAAAGCTCCGACAGGCGGCAGCTCTTGTTGAGTGCAATCTGACTCTTCTTGGTGCAACTGGAATTGAAGATAAGTTGCAGGATGGTGTTCCTGAGGCCATTGAGTCTCTCCGGCAGGCTGGAATCAAGGTTTGGGTTCTCACCGGAGATAAGCAAGAAACTGCTATATCGATTGGTCTGTCATGTAGACTATTGACTCAAAATATGCATTTGATTGTTATAAATGGATCCTCAGAGTTTGAGTGCAGGCGCCTTCTAGCTGATGCTAAAGCCAAATTTGGAATAAAGTCATCTGATTCTGGGAGGGATTGTCAAGATATCGAACATACGCACAATGGTGACGTTTCTAAGTTGAGGACCTCTAATGGTCACATGTCTGAAAGTGGCATACATAACTTCGAGCTGACTGGAGTTATTGCAAGTGACAAGTCAGAATACTCTGAGAAAGTGGCAAATTTTGCTGACACTGATCTAGCATTGGTAATTGATGGGAGCTCCCTGGTGTATATTTTAGAGAAGGATCTTGAATCAGAGGTTGGAGTTCCATCTTCTTTGCAGTAATCTGTGAAAGTTTTTTTTGTTGCATTGGTTGATCAAATGCCACAATTTGGTGAACCTTATAGCCAGTTCTTTACTGCACATACATTGGGTACACACAATCATATTTAACCACGTGCATACCCTCCTACTTCAATTAATCATTTCTTTCATGACTTTTTATGGCAGTTGTTTGATCTGGCGACTTCCTGTAAAGTTGTTATCTGCTGCCGTGTTGCTCCACTACAAAAGGCTGGAATTGTTGATTTGATTAAAAGCAGAACAAGTGACATGACCCTGGCAATTGGTGATGGTGAGATTATTTTCGTCTGATTTTAGTTTTGTGATGCTGGTATTTGACATCTCATATTTTTGTTGACATACTCATTTGTCATTGTTGTCCTGTTTGTAATTGCACGTTACTTTGAACTAGATGTGGAACTTTGCAGGTGATAGGTTCCTTCAGTTTCTTGCTAAGTTGAACCGCATTACCAATTAATGTTAAAACATTTTAAATTGCATCATCAGATGCCTGACACTTGAATTATCATTGATATATGATTGGACCTACCTTTTGTGCCTAAACTTTTTTATGTATTGGATGCTTTGTGATATTATATCCTGGCCATCTGTTGATGTGTTGCATTTTCATAGGAGTCCAATTCAGCAAAAACAATAGTCTTATCTGTTGAACCTGACGATCAGCAAGGGCAAATGCTTTCAGTGGCACAGGGGATCAAATTATATCTTTCTCTAGAAATCAATGTTGCCATCTTATCTTTCGTCGCCTTTTTGTGGCCAGCATTTTTTCCCTACTATTTGACCTTAATTGATTACTCACCATGTTCAACAAAGAATTGACACCCTTTTGTTTTGTGAACATGTTTCACTTTTGCAGGGGCAAATGATGTTTCAATGATACAGATGGCAGATGTTGGTGTTGGAATATGTGGTCAAGAAGGTCGTCAAGCAGTGATGGCATCAGATTTTGCCATGGGACAGTTCCGCTTTCTGAAGAGATTACTTCTTGTACATGGACACTGGAATTATCAGCGTATTGCATACATGATCCTCTACAATTTTTACCGAAATGCTGTTTTTGTGCTAATGTTGTTCTGGTACACATTCTACCCCCTGCTCATTCTTGTATTTGTAATTTCAATTGAAACTAACAAAAATATTACTATGTGATTTTTTCAGGTATATCTTGCATACAGCATATTCTGCAACTCTTGCATTAACAGATTGGAGTAGTGTTTTCTATTCCCTTATCTATACGTCAATTCCCACAGTGGTAGTTGGCATTCTGGACAAGGACTTGAGTCATAATACTCTACTTCATTATCCGAGACTATATGAAACAGGGCTTCAGAATGAGGGCTACAACTTGACGCTCTTCTGGATCACAATGCTAGATACCTTGTGGCAAAGCCTTGTCCTTTTCTATGTTCCCTTCTTCACATACAATATCAGTACAATGGACATATGGAGTATGGGAAGCTTGTGGACGATTGCTGTGGTTATACTTGTCAATATTCATTTGGCCATGGATATCCAACGTTGGGTGCTTATAACCCATCTTGCTGTATGGGGCTCTATAGCTGCAACATTTTTGTGCATGGTGTTAATAGATTCTATTCCAATATTCCCTAACTATGGGTAAGTTTTCCCAGTGCCTCCCTCAAACCATCATATATATATATTTCTAAATGACAACATTTGAAGTCTATCATCTTATTACTGGCAGGACAATATACAATATGGCTGCTTCAAGAACTTATTGGCTTAGTGTTTGCCTTATAATAGTCCTAGGCTTGCTTCCTCGGTTTCTTTGCAAAGTAATCTATCAGACCTTTTGGCCATCTGATATTCAAATAGCAAGAGAAGCTGAGTTATTAAAAAAGCTACCCCGGCAGTTGGGTTCAAGGCCTGCAAGTGATATCAGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012569