BGIOSGA012620

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Revision as of 09:49, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012620| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012620, complete gene.| tag = OS03G03...")
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Gene Name

BGIOSGA012620

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012620, complete gene.

LocusTag

OS03G0352400

Ensembl Transcript ID

BGIOSGA012620-TA

Ensembl Protein ID

BGIOSGA012620-PA

Length

4311

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:14855329..14859639

Sequence Coding Region

14855329..14855587,14856159..14856292,14856493..14856622,14856978..14857138,14857275..14857376
,14857474..14857578,14857653..14857781,14857868..14858008,14858543..14858643
,14858988..14859045,14859352..14859639

Genome Context

<gbrowseImage1> name=IndicaChromosome03:14855329..14859639 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:14855329..14859639 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAAGAAGAAGGAGAGGGCGGTGAACGTGTCGGGGAAGCCGCGCCACTCGCTCGACGTCAACCGCGCCAATGACAAGAAGGGCGCGGGCGGCGGCGCCGGGGGCGGCGGCGGCGGCCGTTCGGCGGCCACGGTGCGGCGGCTCAAGATGTACAAGATGAGGCCCCTCAGGGACCGAGGCGGGAAGATCCTGAAGCACGACCTCCAGTCCAAGGAGCTCCCCAACACCCGCATCGAGCCCGATCGCCGCTGGTTCGGAAATACACGAGTCGTTAATCAGAAAGAGCTTGAATTCTTTCGGGAGGAACTCCAGAGTCGGCTTTCCAATAACTATAATGTGATACTGAAAGAGCGGAAGCTTCCACTGTCACTACTGCAGGATCATCAAAAGCAAGCTAGGGCGCATCTTCTTGACACTGAACCTTTTGAGCATGCATTTGGACCAAAGGGCAAGAGGAAACGCCCAAAACTAATGGCTCTTGATTATGAATCTCTATTGAAGAAAGCTGATGATTCTCAAGGTGCATTTGAGGATAAGCATGCTACAGCGAAGTTGCTGAAAGAGGAAGAGGAAGATGGCTTACGAGACCTAGTCCGGCACACAATGTTCGAGAAGGGACAGAGCAAAAGAATTTGGGGTGAACTCTATAAAGTTATTGACTCTTCAGATGTTGTCGTGCAGGTGTTGGATGCCAGGGATCCAATGGGTACTAGATGCTACCATCTGGAGAAACATCTGAAGGAGAATGCCAAGCACAAACACTTGGTATTCTTACTAAATAAGTGTGATCTAGTACCTGCTTGGGCCACAAAAGGATGGTTGCGCACTTTATCAAAGGACTACCCCACCCTAGCATTCCATGCAAGCATCAACAGTTCATTTGGCAAAGGATCACTTCTTTCAGTGTTACGGCAGTTTGCACGCCTGAAGAGTGACAAACAAGCTATATCTGTTGGTTTTGTTGGATACCCCAATGTTGGGAAGTCATCAGTTATCAACACGTTACGCTCCAAGAGTGTTTGCAAAGTGGCTCCAATTCCTGGAGAGACGAAGGTGTGGCAGTACATTACTCTGACTAAAAGAATATTTCTGATTGACTGCCCTGGGGTTGTGTACCAAAACAATGATTCAGAAACTGATATTGTTCTTAAGGGCGTGGTGCGTGTGACAAATTTGGCGGATGCTTCTGAGCACATTGGTGAAGTTCTGAGACGTGTAAAAAAGGAGCATCTTAAAAGAGCTTACAAAATTGAAGACTGGGTTGATGATAATGATTTTCTTGTCCAACTGAGCAAGACCACTGGAAAGCTACTCAGGGGTGGGGAGCCTGATCTTACAACAACGGCCAAGATGGTGCTTCATGACTGGCAGAGGGGCAAGATTCCCTTTTTTGTGCCTCCACCACAGCAAGGTGAAGATAGTCCATCTGAAACAGCTGAACCTGTGGATAAATCCGATGAGGAAGGGGTGAGTAGTGACAGGACTGCTGCCGCCATGAAAGCGATAGCGGGAATAATCTCATCACAGCAGCAGATGAATGTTCCTTGCCAAAAGGAATTTGGTGTAACTAATGAAGATAGTGAAGTCGCGGAGCAATCAGAGTGA</cdnaseq>

Protein Sequence

<aaseq>MAKKKERAVNVSGKPRHSLDVNRANDKKGAGGGAGGGGGGRSAATVRRLKMYKMRPLRDRGGKILKHDLQSKELPNTRIEPDRRWFGNTRVVNQKELEFFREELQSRLSNNYNVILKERKLPLSLLQDHQKQARAHLLDTEPFEHAFGPKGKRKRPKLMALDYESLLKKADDSQGAFEDKHATAKLLKEEEEDGLRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPMGTRCYHLEKHLKENAKHKHLVFLLNKCDLVPAWATKGWLRTLSKDYPTLAFHASINSSFGKGSLLSVLRQFARLKSDKQAISVGFVGYPNVGKSSVINTLRSKSVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYQNNDSETDIVLKGVVRVTNLADASEHIGEVLRRVKKEHLKRAYKIEDWVDDNDFLVQLSKTTGKLLRGGEPDLTTTAKMVLHDWQRGKIPFFVPPPQQGEDSPSETAEPVDKSDEEGVSSDRTAAAMKAIAGIISSQQQMNVPCQKEFGVTNEDSEVAEQSE</aaseq>

Gene Sequence

<dnaseqindica>1..259#831..964#1165..1294#1650..1810#1947..2048#2146..2250#2325..2453#2540..2680#3215..3315#3660..3717#4024..4311#ATGGCGAAGAAGAAGGAGAGGGCGGTGAACGTGTCGGGGAAGCCGCGCCACTCGCTCGACGTCAACCGCGCCAATGACAAGAAGGGCGCGGGCGGCGGCGCCGGGGGCGGCGGCGGCGGCCGTTCGGCGGCCACGGTGCGGCGGCTCAAGATGTACAAGATGAGGCCCCTCAGGGACCGAGGCGGGAAGATCCTGAAGCACGACCTCCAGTCCAAGGAGCTCCCCAACACCCGCATCGAGCCCGATCGCCGCTGGTTCGGTGAGGATCCCAGTGCCCCCCTCTTCGCTTTCCCCTTTTCTTCTCTAGTTGGGAGTTAAATGATACTAGCTGAGGAGAAAAGTGAAGCGAATTCGATTCGGCTAGTAACTCGGCACCTAGCAGTTAGCATGGCTCGTATGCACCGTCGAATTGGTGTCTGTTTGGTACTAATTTTTGTTGATTCAGCAAGTAACTCGGCACCTAGCAATTAGCATGGATCGTATAGACCGTCGAATTGGTGTCTGTTTGGTACTAATTTTTGCTGGAATAGTAGCTAATGATTGTACAAGTGAAATTTGTGTGGTATGACTTATGGAAGTGCGCGACTCAATGTGCTATTCAATTATGGTAGGGACAATTTGCTGGTTGAAACCTTTTCGAAACATCGGTAAGGTATGCTTGATTGGTGGTTATGGCTTGATATACGATCAAAATGCGTAGATGCCTTGAATGAACATTTCCCTGTTGCAATATTTCTACTTCCAGTTTTTTCCACATTTGGTTCCGGTGACGTAACAGCAAGTCTGCAAGTGTGCTTATTTCTGTACTGCTCTGCTCTTGCTACTTACAGGAAATACACGAGTCGTTAATCAGAAAGAGCTTGAATTCTTTCGGGAGGAACTCCAGAGTCGGCTTTCCAATAACTATAATGTGATACTGAAAGAGCGGAAGCTTCCACTGTCACTACTGCAGGATCATCAAAAGGTACAACTTCTTTTGGTCATTAGGCTGTCGAAAATGTTGGGTCTTCAATCTATTTTGGACATTGAAGAATTAAGTACTTTTGTTAAAATACATGGTGCCTTCCATTTTAACTGTGGCGAAGTGCTCTATAGTCTACTATCTATATCAGTGTACCGTATGTTGCACTTATGTATGTATGTTTGCCCCTGTTGATGATACAGCAAGCTAGGGCGCATCTTCTTGACACTGAACCTTTTGAGCATGCATTTGGACCAAAGGGCAAGAGGAAACGCCCAAAACTAATGGCTCTTGATTATGAATCTCTATTGAAGAAAGCTGATGATTCTCAAGGTACAGTTTGTATATATGTACCCAGTACTTTAATCGCTTAATATTTTTAGTTATATGTAATTACTGATATTTATGAAGAACACAATTTCCTTTAAGTTTGAAATCCTATTTTGCAACTTGGACAAATTTATCTCATGTACATGTTGCACTCATATTCCAAAAAGATCTTCAAATTTTAATTTGCAGGCCTCCTGGCCATTTTGCTACTTAGAACCACTAATGATTGTTGTAGACTATTCTTGGCCTTGGGTATTTCTTATTTTCAGAAGTCAATTACATGAGCTTGTATGCTGTTATTTATCAAGAATACCACTATCAATGTCCTGTACTCTTAGTAAAATGTTGAGTTTTATAGGTGCATTTGAGGATAAGCATGCTACAGCGAAGTTGCTGAAAGAGGAAGAGGAAGATGGCTTACGAGACCTAGTCCGGCACACAATGTTCGAGAAGGGACAGAGCAAAAGAATTTGGGGTGAACTCTATAAAGTTATTGACTCTTCAGATGTTGTCGTGCAGGTAAGTGTTGTGACATTTTGTCCTTGCAAAAAATACTCTCACTCTGTCAAACCATCCAGACATCTTTGGTGCTTTTTTTTTTTAAAAAAAAAGAAGTGGGCATTGATTTATTTGTTGATCCTATTGTTTTGCACAGGTGTTGGATGCCAGGGATCCAATGGGTACTAGATGCTACCATCTGGAGAAACATCTGAAGGAGAATGCCAAGCACAAACACTTGGTATTCTTACTAAATAAGGTATTGATAAGTTCCACAACAATACACAGTGCAAAAGACGGACTATTTTCATCCTTGTATGGTGGCACATTGATGAATGATGGTATACATTTTTTAGTGTGATCTAGTACCTGCTTGGGCCACAAAAGGATGGTTGCGCACTTTATCAAAGGACTACCCCACCCTAGCATTCCATGCAAGCATCAACAGTTCATTTGGCAAAGTAAGCTAGCAGAATCCTGAAGAAGTTCATTGCTTCACCATAAATGACCCCTTACGCATTTGAATCTTTTCCAGGGATCACTTCTTTCAGTGTTACGGCAGTTTGCACGCCTGAAGAGTGACAAACAAGCTATATCTGTTGGTTTTGTTGGATACCCCAATGTTGGGAAGTCATCAGTTATCAACACGTTACGCTCCAAGAGTGTAATTCTCTTTTCTTTAACCGGCTTCACAGATGACATCTTTTTGGTGAACTTTCTGAGTATTTTGTTTGTATACTATATCCATAGGTTTGCAAAGTGGCTCCAATTCCTGGAGAGACGAAGGTGTGGCAGTACATTACTCTGACTAAAAGAATATTTCTGATTGACTGCCCTGGGGTTGTGTACCAAAACAATGATTCAGAAACTGATATTGTTCTTAAGGGCGTGGTATGTATCTGCACTTGTTCGTTTTTGTCTTCACTTTTTAGTTAGATTGCACAAAACAAAGCATCTAGTAAAACACCTCACTATATTTTTTTTCACCTTGCCGGTACTTTTATGTACGACAGATATATATAATGCATTTTCTCAAACATTATTTCAACATAAGAGTTAGAGATGGGCTTGCTGCTGCTATATTGGTCTGAGGTGGTATAGAAGTCCCATGGGTAGCTTTTACCCTGGACAATCTACAAGACTATAACTATTGCCTGTCTGTCCAGTTGTCCATTAATGCTTAAAAAAAATTCCAGTAACACCCAAGGCAATCCAAGGATAGTGTGGATTATATTTTATAGTTGTTTATTGCCCTTCAGATATTTTTCTGTGGTCACACGCTGGAGCACTGCCACTTTTGAAGCATATATTTATATTTATATGGATGTCTATCCTAGTTGATTACCAGGCATTTTAAAGATGCTACGTTTGTGTACTTATCTAGATGGGTAATTTCATTCATCATGTATTTGCATTTGTTGTCAGGTGCGTGTGACAAATTTGGCGGATGCTTCTGAGCACATTGGTGAAGTTCTGAGACGTGTAAAAAAGGAGCATCTTAAAAGAGCTTACAAAATTGAAGACTGGTATGCTTCTTTTAACATTTAGTTTATGGTTTCATTTTAACAATTGTTCTATATAGATATGAACATAACGCTTATTATTTCCACACAATGCGTTCCCTATTGGATAAGTATGTTAGTATTTGGGTTACTTTTCTCTTCTCATAAATCTGAACATTAAGACTTGGCATTTTTTATGACACTATTCTGTTAGTTTACTCATAGCATATTTGCTCTCTTTTGATAAAGTATATTCATGAAGAGGATGCACTTGCTTGTAGTTAGCCTTGTGATGCTGTTGTGCATGGAAACAATTAAACCATTGGAGACAGCACATATCTTATGTTGGATATGTTATCTTTCTGCAGGGTTGATGATAATGATTTTCTTGTCCAACTGAGCAAGACCACTGGAAAGCTACTCAGGGTATGGCTTTAGCATATATGTTGACATGTTGTCAGTCATGTTTCTATCAAATATATTATTCTTGTGGTGAGGCTTTATGAGATTGGGGAATTGGAGAATTGTAATTGTATACTGATTTACAGTGTTTTACAAATTTTAACAATATAATGTGTCAATAAGATGGGTTAATTGGATCCATGCCATTCTAAATATATGAACAGCTTAAATTAACCATCTATAGAAGATTCTGAGCAAAAAAAAACTATCTTTAGAAGATTAACCAACAATTTAACAATTTCTGATGGTGCTTACACTTGTGGTTCACAGGGTGGGGAGCCTGATCTTACAACAACGGCCAAGATGGTGCTTCATGACTGGCAGAGGGGCAAGATTCCCTTTTTTGTGCCTCCACCACAGCAAGGTGAAGATAGTCCATCTGAAACAGCTGAACCTGTGGATAAATCCGATGAGGAAGGGGTGAGTAGTGACAGGACTGCTGCCGCCATGAAAGCGATAGCGGGAATAATCTCATCACAGCAGCAGATGAATGTTCCTTGCCAAAAGGAATTTGGTGTAACTAATGAAGATAGTGAAGTCGCGGAGCAATCAGAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012620