Os12g0454800

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Revision as of 10:29, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0454800| Description = Similar to Histidine kinase| Version = NM_001073256.1 GI:115488473 GeneID:4352167| Length = 3451 bp| Definition = O...")
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Gene Name

Os12g0454800

Description

Similar to Histidine kinase

Version

NM_001073256.1 GI:115488473 GeneID:4352167

Length

3451 bp

Definition

Oryza sativa Japonica Group Os12g0454800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:15924530..15927980

Sequence Coding Region

15924724..15927603

Expression

GEO Profiles:Os12g0454800

Genome Context

<gbrowseImage1> name=NC_008405:15924530..15927980 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:15924530..15927980 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>agctgtcggttcaccggcagcgcctgccactggatggcgctactgctctgggtgttcagctgctcgctcttctccttgtggatcctctcgttcatgaggtcccaggccaccgaggcgcgccacgggacgctcgccgtcatgtgcgacgagcgcgcccggatcctccaggaccaggtgaaggtgagcatgaaccacctccaggcgctcgccatccttgtctccaccttccaccactccaagagcccgtccgccatcgaccagaccacattcgcgcggtacgtggagcgcaccgcgttcgagcgtccgctgacgagcgggctggcgtacgccgctcgggtgacgcactcggagcgggagctgttcgagcggcagcaagcgtggagcatcagagcgatgaacttctcctccaaacggccgcgggcggaggagtacgccccggtcatcttcgcgcaggacgcctacaagcacgtcgtctccatcgacatgctctcgggggcagaagaccgtggaaatctactgcgagcgagagaatcaggcaaggttgttctaactgctcctttccagctgctcaataaacgcatcggagtggtcctgacgtacgcagtgtacaagtctgagcttcccctgaatgcgacggtgcatgatcgtatacagtcttctataggatacttgggtggtgtctttgacatagaaggacatgttgataagttgcttgaaaagcttgcaggcaaagagcccatgacggtgaacatatacgacactaccggtgagagcatgattcgtatgtatggttcttcgaatgaatcagccagtggcatgtgtcatgtcagcacgctcgacttcggtgatccattaaggaagcacgagatgcattgcaggttcacgcaagggccaccttggccatggctggcagtagcatcatcgtacggaaccctcgtgatttctttacttgttggatacatctttcattttactgacaaatggattgccaaagtcgaagatggttacaaggcgactgacatgcagatgccagcaaaggatgaattcgcggccacagagaggatttcagatatggaaagagatctgaaggaagatgctctgtttttcgacacgaccaaaagccccagtctgttggagatctcgcgtctgctgaaccatcgtgatccagctcagaatgttcaccaggaggagcaagagctcaaccttccattggaggcgcaagacaaactgaaagagactgagaggaagctggggaggatgtccaagttcattacaaaggttatgaaattaactagcgctagcattcgctgtttaccttctcgatttcactgcttcaacaagaaggtatggagcattagccttctcggatttttactcttcattcttgtcattggagcttttgatcagccatacaatcaacctttgggcatgggaggggagggtgacaataacatgatgctgaagaattttgggttctctcgtggaaggttgttaattgatacgctccatggtacatggactaaacgcggtgtgcagagtagtgacacgatcagggttgatctcagaaagatgacaaggaataatgacagttctgggcagcagctcaagcactggtcttcacataagtcaagtgagatcccggctgtcctgtatgttccgatgaatggaaagcaagttatagtccactgcaatctaattgtagatgagaaagcattggtaaattggatatcaaatggtgatactgatcagtcaagcaagtatcagaaagaaactgcagggatacaaaacagaacagacaagcctcacctgccagcaaacaagtcacacaaaacaacagtaagcccgtggattgtcttacttccagttatcatgcttgtactccttggcagtattatatggcgccggtgcaacgaccataggaggagagttcaacaaaaagagctggaacttttgggaataatggggcctagtcgattccaactacaagatctggtagccgcaacgggcaatttcgcagatgagaacaagctcgggcaaggagggtttggccctgtgtacaaaggctacttgagggaccaggaccttcatgtggccatcaaggtgttgtccagaaggcaatcttgtcaagaacaatcggcgcaagggttgagggagttcaaggcagaggtgaaagtcatgacgcaactgaggcacagaaacattgtcaagcttgtgggctggagcgacagcaagaaacagctccttctcgtttatgaacttatggctcaaggaagccttgacaagcatctctacgaccctgagaaaattttaacttggcaacaaaggtaccaaattaaatttgctaacctgtttaattcaactgacaagattgtacttgatctgggctctgctttgctctacctccaccatgactgcgagaaatgcattgtgcatggagacatcaagcctgcaaatgtaatgcttgatgtgtcacacaatgctaagcttggtgacttcgggttagcaaggcttgttgagcatgggggagagccacaaacaacacaagttgtcgcagggacccctggatacattgacccagaattcatcaacaaccgctggcctcgcaccgaattggatgtgtacagcttcggtattgtcctcttagagatagcttgtggcaagcggccggcatcgaggcagctgccaaatggagcttcatcactgctagcctgggtgcgtgatttgtatgaccagggcaagattcttgacgcagcagatcagagactgaacggcgagttcaatcagcagcaaatggagcgtgtgatcgtcatgggtctctgctgttcacatcaagacccgatccagcgaccgtctatcgtgcaagctatggatgttctgtga</cdnaseq>

Protein Sequence

<aaseq>SCRFTGSACHWMALLLWVFSCSLFSLWILSFMRSQATEARHGTL AVMCDERARILQDQVKVSMNHLQALAILVSTFHHSKSPSAIDQTTFARYVERTAFERP LTSGLAYAARVTHSERELFERQQAWSIRAMNFSSKRPRAEEYAPVIFAQDAYKHVVSI DMLSGAEDRGNLLRARESGKVVLTAPFQLLNKRIGVVLTYAVYKSELPLNATVHDRIQ SSIGYLGGVFDIEGHVDKLLEKLAGKEPMTVNIYDTTGESMIRMYGSSNESASGMCHV STLDFGDPLRKHEMHCRFTQGPPWPWLAVASSYGTLVISLLVGYIFHFTDKWIAKVED GYKATDMQMPAKDEFAATERISDMERDLKEDALFFDTTKSPSLLEISRLLNHRDPAQN VHQEEQELNLPLEAQDKLKETERKLGRMSKFITKVMKLTSASIRCLPSRFHCFNKKVW SISLLGFLLFILVIGAFDQPYNQPLGMGGEGDNNMMLKNFGFSRGRLLIDTLHGTWTK RGVQSSDTIRVDLRKMTRNNDSSGQQLKHWSSHKSSEIPAVLYVPMNGKQVIVHCNLI VDEKALVNWISNGDTDQSSKYQKETAGIQNRTDKPHLPANKSHKTTVSPWIVLLPVIM LVLLGSIIWRRCNDHRRRVQQKELELLGIMGPSRFQLQDLVAATGNFADENKLGQGGF GPVYKGYLRDQDLHVAIKVLSRRQSCQEQSAQGLREFKAEVKVMTQLRHRNIVKLVGW SDSKKQLLLVYELMAQGSLDKHLYDPEKILTWQQRYQIKFANLFNSTDKIVLDLGSAL LYLHHDCEKCIVHGDIKPANVMLDVSHNAKLGDFGLARLVEHGGEPQTTQVVAGTPGY IDPEFINNRWPRTELDVYSFGIVLLEIACGKRPASRQLPNGASSLLAWVRDLYDQGKI LDAADQRLNGEFNQQQMERVIVMGLCCSHQDPIQRPSIVQAMDVL</aaseq>

Gene Sequence

<dnaseqindica>195..3074#gttgatcgcgcggacgacacccccatgtcgtggacgcagagcgctaaggacggctgccgcagccgagccaaggcatcagcggatcgagcgcgattctgctctgcggggagccccgacgactggggcggggttggaggaggagaacagcacggctgcctggcttgcctggttgtggctgctgctgctaccgttgaagctgtcggttcaccggcagcgcctgccactggatggcgctactgctctgggtgttcagctgctcgctcttctccttgtggatcctctcgttcatgaggtcccaggccaccgaggcgcgccacgggacgctcgccgtcatgtgcgacgagcgcgcccggatcctccaggaccaggtgaaggtgagcatgaaccacctccaggcgctcgccatccttgtctccaccttccaccactccaagagcccgtccgccatcgaccagaccacattcgcgcggtacgtggagcgcaccgcgttcgagcgtccgctgacgagcgggctggcgtacgccgctcgggtgacgcactcggagcgggagctgttcgagcggcagcaagcgtggagcatcagagcgatgaacttctcctccaaacggccgcgggcggaggagtacgccccggtcatcttcgcgcaggacgcctacaagcacgtcgtctccatcgacatgctctcgggggcagaagaccgtggaaatctactgcgagcgagagaatcaggcaaggttgttctaactgctcctttccagctgctcaataaacgcatcggagtggtcctgacgtacgcagtgtacaagtctgagcttcccctgaatgcgacggtgcatgatcgtatacagtcttctataggatacttgggtggtgtctttgacatagaaggacatgttgataagttgcttgaaaagcttgcaggcaaagagcccatgacggtgaacatatacgacactaccggtgagagcatgattcgtatgtatggttcttcgaatgaatcagccagtggcatgtgtcatgtcagcacgctcgacttcggtgatccattaaggaagcacgagatgcattgcaggttcacgcaagggccaccttggccatggctggcagtagcatcatcgtacggaaccctcgtgatttctttacttgttggatacatctttcattttactgacaaatggattgccaaagtcgaagatggttacaaggcgactgacatgcagatgccagcaaaggatgaattcgcggccacagagaggatttcagatatggaaagagatctgaaggaagatgctctgtttttcgacacgaccaaaagccccagtctgttggagatctcgcgtctgctgaaccatcgtgatccagctcagaatgttcaccaggaggagcaagagctcaaccttccattggaggcgcaagacaaactgaaagagactgagaggaagctggggaggatgtccaagttcattacaaaggttatgaaattaactagcgctagcattcgctgtttaccttctcgatttcactgcttcaacaagaaggtatggagcattagccttctcggatttttactcttcattcttgtcattggagcttttgatcagccatacaatcaacctttgggcatgggaggggagggtgacaataacatgatgctgaagaattttgggttctctcgtggaaggttgttaattgatacgctccatggtacatggactaaacgcggtgtgcagagtagtgacacgatcagggttgatctcagaaagatgacaaggaataatgacagttctgggcagcagctcaagcactggtcttcacataagtcaagtgagatcccggctgtcctgtatgttccgatgaatggaaagcaagttatagtccactgcaatctaattgtagatgagaaagcattggtaaattggatatcaaatggtgatactgatcagtcaagcaagtatcagaaagaaactgcagggatacaaaacagaacagacaagcctcacctgccagcaaacaagtcacacaaaacaacagtaagcccgtggattgtcttacttccagttatcatgcttgtactccttggcagtattatatggcgccggtgcaacgaccataggaggagagttcaacaaaaagagctggaacttttgggaataatggggcctagtcgattccaactacaagatctggtagccgcaacgggcaatttcgcagatgagaacaagctcgggcaaggagggtttggccctgtgtacaaaggctacttgagggaccaggaccttcatgtggccatcaaggtgttgtccagaaggcaatcttgtcaagaacaatcggcgcaagggttgagggagttcaaggcagaggtgaaagtcatgacgcaactgaggcacagaaacattgtcaagcttgtgggctggagcgacagcaagaaacagctccttctcgtttatgaacttatggctcaaggaagccttgacaagcatctctacgaccctgagaaaattttaacttggcaacaaaggtaccaaattaaatttgctaacctgtttaattcaactgacaagattgtacttgatctgggctctgctttgctctacctccaccatgactgcgagaaatgcattgtgcatggagacatcaagcctgcaaatgtaatgcttgatgtgtcacacaatgctaagcttggtgacttcgggttagcaaggcttgttgagcatgggggagagccacaaacaacacaagttgtcgcagggacccctggatacattgacccagaattcatcaacaaccgctggcctcgcaccgaattggatgtgtacagcttcggtattgtcctcttagagatagcttgtggcaagcggccggcatcgaggcagctgccaaatggagcttcatcactgctagcctgggtgcgtgatttgtatgaccagggcaagattcttgacgcagcagatcagagactgaacggcgagttcaatcagcagcaaatggagcgtgtgatcgtcatgggtctctgctgttcacatcaagacccgatccagcgaccgtctatcgtgcaagctatggatgttctgtgatctgcagacgcagagttgccggtacctcccgcagcacatgatacaggacacatccggtccatgcaagaacaggcttatgccgacctgccagttgaggatcattctgtgcatactgtcacccgaagtacgtattttacttccaaggattcagtttatctacttgctgaaggataacgaattctctcttttgaatagcaatattagttatgtttacatgcgcctgtttagattgttttgtcaacaagattgctgataggcacacatctattttgttcatagttttgtgctatctatctatctattatccatctacacatgtagtataaatgatagtttcatatgaaccagctctattgttagcattaatcctgacttac</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0454800, RefSeq:Os12g0454800