BGIOSGA012637

From RiceWiki
Revision as of 09:50, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012637| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012637, complete gene.| tag = OS03G03...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA012637

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012637, complete gene.

LocusTag

OS03G0355200

Ensembl Transcript ID

BGIOSGA012637-TA

Ensembl Protein ID

BGIOSGA012637-PA

Length

3363

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:15009285..15012647

Sequence Coding Region

15009285..15009757,15010894..15011347,15011508..15011705,15011783..15011864,15012553..15012647

Genome Context

<gbrowseImage1> name=IndicaChromosome03:15009285..15012647 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:15009285..15012647 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGTGCCCACCAACGACTCCGCCGTGCGGGCGCGCCTCCGCCGCCTCGGCGAGCCCGTCACGCTCTTCGGCGAGCGCGAGATGGAGCGCCGGGACCGCCTCCGCGCTCTCATGGTCCGCCTCGAGGCCGACGGCCACCTCGACCGCCTCCTCCGCGCGCAGGAGGAGGAGCAGGGCGCCGCGGGCGCCGAAGAGGAGGAGGAGCAGATCCAGTACCCCTTCTTCACCGAGGGCACGCAGGAGCTTCTCAAGGCGCGCGTCGACATCGCGCAGTACTCGCTGCCCCGAGCCAAGGCCAGGATAGAGCGGGCCAAGCGCTGCCATGACGACCCCGACGAGGACCCTGAGGCAGAGGCCAACCTTGTCGTTAAGCAGGCGGAGGATTTCGTGCTTGAGTGCAGCGAGATTGGAGATGACCGCCCCCTCACCGGCTGCTCCTTCTCTCGAGATTTTTCAATGCTCGCTACAAGTTCATGGAGTGGGATGATCAAAGTGTGGAGTATGCCACAAGTAACTAAAATTGCAACTCTGAAAGGTCACACAGAACGTGCAACTGATGTTGCGTTTTCACCAGTTGACGACTGCTTAGCAACAGCTTCAGCTGATAAAACTGCCAAACTATGGAAGACCGATGGGTCACTCTTATTGTCCTTTGATGGTCACCTCGATCGGCTTGCTCGCCTTGCTTTTCATCCATCTGGAGGGTACCTTGCTACAGCTAGCTTTGACAAAACCTGGAGATTGTGGGACGTTAGCACTGGAAAGGAACTTCTACTCCAAGAAGGGCACAGCAGAAGTGTCTATGGAGTTAGCTTTCACCCAGATGGTTCTTTAGCTGCATCTTGTGGTCTTGATGCGTATGCTCGAGTTTGGGATTTAAGATCAGGAAGATTGTGGGGCACACTCATGGGACATGTGAAGCCTGTCTTAGGAGTGAGCTTCTCCCCTAATGGTTATCTGGTTGCAACTGGAAGTGAAGACAATTTCTGTCGAATATGGGATTTGAGGACTAAAAGAATGTTATATTCTATACCAGCACATAAGAGTCTTATCTCACATGTCAAGTTTGAACCCCAGGAAGGCTATTATTTGGCAACTTCGTCCTATGACACCAAAGCAGCACTGTGGTCAGCTCGTGATTACAAACCAATCAAGAGTTTGGTGGCCCATGAGTCAAAGGTTACTAGTTTGGATATTAGTGGAGATGGACAGCAGATTGTGACTGTGTCACATGATAGAACGATCAAGATTTGGTCCTGCAGAAGCAGGGCACAAGATAATGCCATGGAGCTGGACTGA</cdnaseq>

Protein Sequence

<aaseq>MAVPTNDSAVRARLRRLGEPVTLFGEREMERRDRLRALMVRLEADGHLDRLLRAQEEEQGAAGAEEEEEQIQYPFFTEGTQELLKARVDIAQYSLPRAKARIERAKRCHDDPDEDPEAEANLVVKQAEDFVLECSEIGDDRPLTGCSFSRDFSMLATSSWSGMIKVWSMPQVTKIATLKGHTERATDVAFSPVDDCLATASADKTAKLWKTDGSLLLSFDGHLDRLARLAFHPSGGYLATASFDKTWRLWDVSTGKELLLQEGHSRSVYGVSFHPDGSLAASCGLDAYARVWDLRSGRLWGTLMGHVKPVLGVSFSPNGYLVATGSEDNFCRIWDLRTKRMLYSIPAHKSLISHVKFEPQEGYYLATSSYDTKAALWSARDYKPIKSLVAHESKVTSLDISGDGQQIVTVSHDRTIKIWSCRSRAQDNAMELD</aaseq>

Gene Sequence

<dnaseqindica>1..473#1610..2063#2224..2421#2499..2580#3269..3363#ATGGCCGTGCCCACCAACGACTCCGCCGTGCGGGCGCGCCTCCGCCGCCTCGGCGAGCCCGTCACGCTCTTCGGCGAGCGCGAGATGGAGCGCCGGGACCGCCTCCGCGCTCTCATGGTCCGCCTCGAGGCCGACGGCCACCTCGACCGCCTCCTCCGCGCGCAGGAGGAGGAGCAGGGCGCCGCGGGCGCCGAAGAGGAGGAGGAGCAGATCCAGTACCCCTTCTTCACCGAGGGCACGCAGGAGCTTCTCAAGGCGCGCGTCGACATCGCGCAGTACTCGCTGCCCCGAGCCAAGGCCAGGATAGAGCGGGCCAAGCGCTGCCATGACGACCCCGACGAGGACCCTGAGGCAGAGGCCAACCTTGTCGTTAAGCAGGCGGAGGATTTCGTGCTTGAGTGCAGCGAGATTGGAGATGACCGCCCCCTCACCGGCTGCTCCTTCTCTCGAGATTTTTCAATGCTCGCTACAAGGTACGGCCACTTAATCAAACGGAATAGCGTAGGGTTTTATCTTTGTATGTCTTAAAATAGTGGAATGATTTGCTCGCCGAAGTGTTGCAATCGTCTTATTAGGTCAATTGTTAATATGGGTTTGGTAACTTGCTTAACTTGTCCCAGTTTAGCATATCAATTGAGTAAAAGCTGTTCTAAGTTTGGGATTGGCAATGACTGAAAACACTCTGAATTGCTGCTATATATGGCAGATGGCCGTGTTTCTTCACATTTACACTGCTGCTGCATAGAACCATGCTGTTCTGCTTCAGCATTTCTGTCATGATTGCTTTGCGTTGAACCAGGTGCAGCTAGCACTCGTTCAAAATTGCAATCACAATAGTTCATCATGGCGTGATATCGGCTGGATGAATCAACAAATTTTTTTATGGCTGTATGATTTATAGAACTAGCTAGCGGCTCATGTTTGGGCAGCTAGAATTTCCTTCCATTGAGCAGATGGAGGATGGTATCATGCTTATCGGCTAGCACTATTTTGAGCAGGCTGGTCTTCACATTTGCAGGATTGCCTGTAACAGAACTATTGCGGTGTTCCAAAATACACTAGGTGGGTGGCATGGTAGCATCTGGCTCCTTCTCGCATACAGGGTATCTTCACAATAGTGGAGTATCCCTGATGATTTTCAATTGTGATGCTAATTGAATTTCATAGGAGTTCATATACACATTGTTTTTGGAAGGGAAGTTCATGCACGCTTAGGCTGCATTTGCTTCAACATTTCATCAGATTGGCCAATTTCCTAACCTGAAAAGACACTCGATTAGATCATGATTAATTAAGTATTACCTATTATAAACTTGAAAATAGATTTATTTGAATTTTTAAATAAACTTCTATATAGAAAGTTTCTTTCAAAAATCACACCGTTTAGCGGCTTGGGAAGCGTGCCCGCGTTAATCTGGTGCTAGTAGCTGAAAAGAACATAGCCTTAGTAATTTTGGTAAACTAATTGTTGATGTCATGTTGTTGGATACCTTTTTCCTTAATCTTGAGCCTCAATTAGCTTATGTTCTCTTGTTCTTGGCCTTAACTTATGTTTTCTTGTTCTTGCTTCCTTGTCAGTAAATAATGACTTTATTTCTGTGTTTTTTAGTTCATGGAGTGGGATGATCAAAGTGTGGAGTATGCCACAAGTAACTAAAATTGCAACTCTGAAAGGTCACACAGAACGTGCAACTGATGTTGCGTTTTCACCAGTTGACGACTGCTTAGCAACAGCTTCAGCTGATAAAACTGCCAAACTATGGAAGACCGATGGGTCACTCTTATTGTCCTTTGATGGTCACCTCGATCGGCTTGCTCGCCTTGCTTTTCATCCATCTGGAGGGTACCTTGCTACAGCTAGCTTTGACAAAACCTGGAGATTGTGGGACGTTAGCACTGGAAAGGAACTTCTACTCCAAGAAGGGCACAGCAGAAGTGTCTATGGAGTTAGCTTTCACCCAGATGGTTCTTTAGCTGCATCTTGTGGTCTTGATGCGTATGCTCGAGTTTGGGATTTAAGATCAGGAAGATTGTGGGGCACACTCATGGGACATGTGAAGCCTGTAAGTTCATAGCATCAATTTTCCAATCTTTTTCTAAAGTACTGTACCATTCATTTCAAGCTGTTACGGCTCTTTATTGCTTGGTTTGTGGTTACATTTATTTAGTTGTGGACATGCTATTGCTTTTTTATATTGTAACATGATTTTACTTTCTTTTCAGGTCTTAGGAGTGAGCTTCTCCCCTAATGGTTATCTGGTTGCAACTGGAAGTGAAGACAATTTCTGTCGAATATGGGATTTGAGGACTAAAAGAATGTTATATTCTATACCAGCACATAAGAGTCTTATCTCACATGTCAAGTTTGAACCCCAGGAAGGCTATTATTTGGCAACTTCGTCCTATGACACCAAAGCAGCAGTATGCCTAATAATAATGCGCCATTTATTTTATTTCTTTTATTGTCTCATTTCTGATATTCTTCCTTCCTTTTGCAGCTGTGGTCAGCTCGTGATTACAAACCAATCAAGAGTTTGGTGGCCCATGAGTCAAAGGTTACTAGTTTGGATATTAGTGGAGGTAACCACTTGCTTAAGTGCCTTTTATCTTTGCTGTATGTGAAATTATATTTGGATATCCTTTTCTTGTGAGAATTGAGATCAATAGTTTTAGCCCTTTTTATCTGTCCATTCCTCATATCAAGTTGGACATCCACCATTTGGTTATGCTAAAACAAATTCCCATGTATAGTGCACTTGGATTTTCTTAGCCAATATCAACACTCTCATCTCTGAACTAACTGCAGTTGTTAGAGCAGTGATGCTGCTAAAAACGGTTCAAACCAAACCTATTTGTCTGTATTACTTTTAGAACCTTATAGATCTATGCTATTCTATGGTGCACTTTCATCGTATAAAATTGCATATCATGCATTTCCCACCATTTGTTTGTTTGTCCTTAATGGCATACCCATCTTGTTTCTTTAATCCTTTGTTGAAAATGGTATCTGCCAGTTGTACGTTCTGATTGTTCTTTCCATCTCTATTCTCCCTCAACTTGTTTCTTGCAAAATGTATCAGCTTTTGATCCTTATTCCTAACAGATGCCCTAGTAAACTCTAGGGATCGGTACATTAGGTGGCGTTGTTGTCTCATTCTTCATTTTCCTTTTCAAGATTGTGCCGTATTATCATGCCATCCACTTGCCACAAGATTCAAACATGTCATATCTGAATTTCTAATTGGTGGTTTGTGTAAATCTTGTGCAGATGGACAGCAGATTGTGACTGTGTCACATGATAGAACGATCAAGATTTGGTCCTGCAGAAGCAGGGCACAAGATAATGCCATGGAGCTGGACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012637