BGIOSGA012644

From RiceWiki
Revision as of 09:50, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012644| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012644, complete gene.| tag = OS03G03...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA012644

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012644, complete gene.

LocusTag

OS03G0356596

Ensembl Transcript ID

BGIOSGA012644-TA

Ensembl Protein ID

BGIOSGA012644-PA

Length

2617

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:15139056..15141672

Sequence Coding Region

15139056..15139081,15139775..15139939,15140037..15140202,15140295..15140411,15140532..15140725
,15140808..15140914,15140989..15141058,15141375..15141672

Genome Context

<gbrowseImage1> name=IndicaChromosome03:15139056..15141672 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:15139056..15141672 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTCAACCTCCAGCTCGGCATCAGACATGCAGTAGGAAAACAAGGCCCGATTACGCTTGATTTGAAGTCATCAGCTTTTGACCCAAAGGAGAAAGTATGGACAAGGTTTCCTCCAGAAGGATCAAAGTACACCCCTCCTCACAGTTCTTGCGATTTCAAATGGAAAGATTACTGCCCGCAAGTGTTCCGGACACTACGCAAGTTATTCAAGGTTGATGCGGCAGATTATATGTTGTCCCTTTGTGGTGATCAGGCTCTCCGGGAGCTCTCATCCCCCGGTAAGAGTGGAAGCTTCTTTTATCTCACGAGCAATGATCAGTACATGATAAAGACGATGAAGAAATCTGAAGTAAAGATATTTCTTAAGATGCTTCGAGCTTACTACAATCATGTTCGGTCATTTGAGAACACTCTAGTCACCAAATTTTTTGGTCTACATTGTGTAAAGTTAGCTGGAGCTAACCAAAAGAAGGTTCGTTTCGTCATCATGGGAAACTTGTTTTGTTCTGATTATTCCATTCATAGACGATTTGATCTGAAAGGCTCATCACTTGGACGTACAACTGACAAGCCACAAACAGAAATTGACGAATACACTACTTTGAAAGACCTCGATCTTAACTTTATCTTTCGATTGCAAAAACACTGGCACCAAGAGTTCCTAAGACAAGTCGATAAGGACTGCGACTTTCTTGAGCAAGAGAACATCATGGACTACAGTCTTTTGGTGGGTGTACATTTCAGAGACAAAAGAAATCTATTAGCAAGTGAAGGTTCCTTTGATAGTGATAGTAGCAGAGCGTCATCGCCTCACCTGTCTAGAGGAGATACTGATCCAAACAGGTTTTCGAAGATAAAACTTGGGTCCAACATGCCAACAAGAGCTGAGCTAACAGTACGAAAGAGTGAGTGCGAGCCTCAGATCATCGGAGAGCCTACTGGGGAGTTCTACGATGTTATACTATATTTTGGGATTATAGACATCCTTCAAGACTACGATATCAGCAAAAAGCTTGAGCATGCATACAAGTCCTTTCAGTATGACCCAACATCTATTTCAGCAGTAGATCCGAAACAGTATTCCAGACGCTTCAAAGATTTTGTGTACAAAGCGTTCCAAGAAGAGAAGATAGACATCTGA</cdnaseq>

Protein Sequence

<aaseq>MLNLQLGIRHAVGKQGPITLDLKSSAFDPKEKVWTRFPPEGSKYTPPHSSCDFKWKDYCPQVFRTLRKLFKVDAADYMLSLCGDQALRELSSPGKSGSFFYLTSNDQYMIKTMKKSEVKIFLKMLRAYYNHVRSFENTLVTKFFGLHCVKLAGANQKKVRFVIMGNLFCSDYSIHRRFDLKGSSLGRTTDKPQTEIDEYTTLKDLDLNFIFRLQKHWHQEFLRQVDKDCDFLEQENIMDYSLLVGVHFRDKRNLLASEGSFDSDSSRASSPHLSRGDTDPNRFSKIKLGSNMPTRAELTVRKSECEPQIIGEPTGEFYDVILYFGIIDILQDYDISKKLEHAYKSFQYDPTSISAVDPKQYSRRFKDFVYKAFQEEKIDI</aaseq>

Gene Sequence

<dnaseqindica>1..26#720..884#982..1147#1240..1356#1477..1670#1753..1859#1934..2003#2320..2617#ATGCTCAACCTCCAGCTCGGCATCAGGTGCGTGCGTGTCCCGTCTCTTACTCTTCTTCTCCTTCTTCTTGTTCTTTTTATTTTTGTCCGTTCTTTCGATCCGGGTGCTCCATCCAAATTTTCCCTACATGGATTTCCTCTCCTTTTTCAATGTATTTATGCTGATTGCGCATTTTGAATTTCGTATGATGTAATGCCATCGCCAATTAATCTACCGTGCAGATAAATTTGCAAAAAAAAAAAAAGGTTAGAAGGTGATGTTTATTACATGATTTTAATTAGATTATTCTGGTCTCATGGTAAGCAAAACTTTTCAATGGCTAGCTACAAATGCCGAATGATTTTACCTCCCCCTCCTGACGGGGATGTGGCAATTTTACAAGAAGTCATTGTTTGCACGTAGAGGAAGCGACGCGTTGAAAAATTCAACAAAAAATTCTATGCCTAACATGTGCATTTGTTTATTGACTCGAAGCTGAAATGGTGGCAAATTGTGATTAATTGGAATTTTACGACAAGAAGAGGGGATTCTTTTTATTGAAAAATTTAATATGAAGTCAAGCATAATAACAGCAGGGCATACTGTGGGCCAAAAGCATACTTGCATATTTTCATTTAAGCAGATATTATATCTTCTTACACTAGAATAGTAAAATGCATGTATTTGCAACATTTCAGAATGAATTTGTCTATGCTCTAATAACTTTGTCTGGGCAATAGACATGCAGTAGGAAAACAAGGCCCGATTACGCTTGATTTGAAGTCATCAGCTTTTGACCCAAAGGAGAAAGTATGGACAAGGTTTCCTCCAGAAGGATCAAAGTACACCCCTCCTCACAGTTCTTGCGATTTCAAATGGAAAGATTACTGCCCGCAAGTGTTCCGGTTGGTCATCACTCCAATGACTTATTTGTGTGTTATGCCTGCATTTAGCTTAATTCATTCTCATCAGCGGTACAACTTGTCCTGGATTGAATCACAGGACACTACGCAAGTTATTCAAGGTTGATGCGGCAGATTATATGTTGTCCCTTTGTGGTGATCAGGCTCTCCGGGAGCTCTCATCCCCCGGTAAGAGTGGAAGCTTCTTTTATCTCACGAGCAATGATCAGTACATGATAAAGACGATGAAGAAATCTGAAGTAAAGGTTGGTGCATCATGTTTAGTTTGTCCAGATGCTTTCTGAATTCACATCTGGCACTTCTGTACTAAATCTACAAAGAACTTGCCATCATGTAGATATTTCTTAAGATGCTTCGAGCTTACTACAATCATGTTCGGTCATTTGAGAACACTCTAGTCACCAAATTTTTTGGTCTACATTGTGTAAAGTTAGCTGGAGCTAACCAAAAGAAGGTCAGTACTTAATATATATCTGTATATCATGCTAAAGCTAATTTATTAGCCAATAGATTCTTATTAAGCTTATAAATCAATATGTCATGTCTGCTCATCTGTTTGCTATATTATTACCAGGTTCGTTTCGTCATCATGGGAAACTTGTTTTGTTCTGATTATTCCATTCATAGACGATTTGATCTGAAAGGCTCATCACTTGGACGTACAACTGACAAGCCACAAACAGAAATTGACGAATACACTACTTTGAAAGACCTCGATCTTAACTTTATCTTTCGATTGCAAAAACACTGGCACCAAGAGTTCCTAAGGTAAGTGAGGCTAGTGCAAGAGTGAGTGGTCATCACATTTTTACTCGTTGTGTTAATGTAGAAGTTAAATGTGTTCAAGCAGACAAGTCGATAAGGACTGCGACTTTCTTGAGCAAGAGAACATCATGGACTACAGTCTTTTGGTGGGTGTACATTTCAGAGACAAAAGAAATCTATTAGCAAGTGAAGGTAAGATGAAAAATATAATCAATTTAAGTTTTTGACATGGTTGTTCTATACCTTACGAAGTGCATGGGTTGAAGGTTCCTTTGATAGTGATAGTAGCAGAGCGTCATCGCCTCACCTGTCTAGAGGAGATACTGATCCAAACAGGTAAAATAAGATACTTGATTACTCTTGCTCTTGTTGTCACTACTTTTCAGGCATACACATGCTATACGATCTTCCATATTGAGATGCCCCATATATATGCTTCCTTGATGTTCGCCTTGATTCTAATGTTATGTTCAACGGGCTTCATTGCAGTAGAGATATACGATACTTGTCATCAAGAACTAATAGGCAGCATTCGTTGCCACCACCATTTTACCTCCTTTTCCTTGCACTTCTATATGATAAGAAATAATTTGGCTGTATTGATGTCTCCAAGTTCTAATTTTAACATCACTAAGATTCTTTGGGTGGACAGGTTTTCGAAGATAAAACTTGGGTCCAACATGCCAACAAGAGCTGAGCTAACAGTACGAAAGAGTGAGTGCGAGCCTCAGATCATCGGAGAGCCTACTGGGGAGTTCTACGATGTTATACTATATTTTGGGATTATAGACATCCTTCAAGACTACGATATCAGCAAAAAGCTTGAGCATGCATACAAGTCCTTTCAGTATGACCCAACATCTATTTCAGCAGTAGATCCGAAACAGTATTCCAGACGCTTCAAAGATTTTGTGTACAAAGCGTTCCAAGAAGAGAAGATAGACATCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012644