BGIOSGA012663

From RiceWiki
Revision as of 09:50, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012663| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012663, complete gene.| tag = OsI_116...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA012663

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012663, complete gene.

LocusTag

OsI_11658

Ensembl Transcript ID

BGIOSGA012663-TA

Ensembl Protein ID

BGIOSGA012663-PA

Length

3359

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:15510464..15513822

Sequence Coding Region

15510464..15511434,15512910..15513120,15513317..15513449,15513566..15513822

Genome Context

<gbrowseImage1> name=IndicaChromosome03:15510464..15513822 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:15510464..15513822 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCCACGGTGAGGCGCGCGTTCCGGTGCCTCCTCGACGGCCTCCGCTCCCTGCCGCCGCGCCGCCGCCGCGCGGGCGCCGGCGGCGGGGCCGCGCGGAGGTCATCCAAGGCGGCACCCCGCGTCGTCGTCATCCGCCGGTTCAGCGGCAAGCTGGATCGCCGTCGGGCCAGCGCGTCGGGAGGGCCGCCGACGCCGCCTGCGGCGGCGGCGGCGGCGCCCGTCACCATCCGCGTGGCGACGTTCAACGCCGCCATGTTCTCCATGGCGCCCGCCGTGCCGTCGCCGCCGGATCACGACGACTACGACGGCGACGGCGAAGGGTGCTCCACGTGGCGCGCCCCGGCCTCCTCCTCCGGCGGCAGCCGGCTGGCGCGGCGGCCCAAGAAGGGCATCCTCAAGGCGCAGAGCAGCTCGAGCGCGCCGCCGCCGCCGCCGTCCCCCGAAGTCGAGCTGCTGCGGCGGCGGCGGCACGTGTCGATCAGCCTCCCCGACGACGACGACGAGATCGCCCCGCACCACAGAAGGAACAGCAGCAGCAGCAGCAGCAGCGCCAGCGCGCGCCTCGTGACGAGGCCGGCGGCGGCGACCAGCGGGAGCGGCAGGTGGAGGTCGGTGTTCGGGGCGGTGTGGGAGCACCAGAACCATTACCAGCAGCGACGGCAGAAGCAGAAGCAGAAGCAGGAGCGGGAGCAGGCGACGGCGAGGCACCGGAGCAGCAGCGGCGCGGCGCGGCGGCGGAGCGTGGCGGAGGCGCTGCGGGAGGCGGGCGCGGACATGGTGGCGCTGCAGAACGTGCGCGCGGAGGAAGGGCGCGGGATGCGGCCGCTGTCGGAGCTCGCCGAGGGGCTCGGGATGCGGTACGTGTTCGCCGAGAGCTGGGCGCCGGAGTACGGCAACGCCGTGCTCTCCCGCTGGCCCATCAAGCGCTGGAACGCGCGCCGCCTCGCCGACCACTTCGACTTCCGGAACGTGATGAGAGCCACCATTGAGGTGCCGGGAGCCGGGGAGGTGAACCTGTACTGCACCCATCTGGACCACCTCGACGAGGGCCTCAGGATGAAGCAGGTCGACTCCATCCTCCGCTTCGCCGACGGCCACCACCACATCCTCGCCGGCGGCCTCAACGCCCTCGACGCCTCCGACTACTCCGCCGACCGCTGGGCCGCCATCGCCAAGTACCACGAGGAGATCGGCAAGCCGCCGCCGAAGTCGGAGGTGATGAGGCACCTCAAGGCGAAGCGCTACGTCGACGCCAAGGACTTCGCCGGAGGGCGTGACGCCGGCCTGGTGGTGGTTCCCAATGGCCAAGATGTGCAGGGGACGTGCAAGTACGGCACGAGGGTGGACTACATCCTGGCGTCGCCCAACTCGCCGTACAGCTTCGTGCCGGGGTCGTACGCCGTCGTTCCGTCCATGGGCACCTCGGATCACCACATCGTCATGGTGGACGTCGCCGTCGCCGCCCACGATGGCGGCGGCGGCGGCGGCGCGGCGAGGCGGCGGCGGAGGCGGAGGGTGGTGAAGGTGACGAACAAGAGTTCGGCGAGAGGGATATTCGCCGATTAG</cdnaseq>

Protein Sequence

<aaseq>MASTVRRAFRCLLDGLRSLPPRRRRAGAGGGAARRSSKAAPRVVVIRRFSGKLDRRRASASGGPPTPPAAAAAAPVTIRVATFNAAMFSMAPAVPSPPDHDDYDGDGEGCSTWRAPASSSGGSRLARRPKKGILKAQSSSSAPPPPPSPEVELLRRRRHVSISLPDDDDEIAPHHRRNSSSSSSSASARLVTRPAAATSGSGRWRSVFGAVWEHQNHYQQRRQKQKQKQEREQATARHRSSSGAARRRSVAEALREAGADMVALQNVRAEEGRGMRPLSELAEGLGMRYVFAESWAPEYGNAVLSRWPIKRWNARRLADHFDFRNVMRATIEVPGAGEVNLYCTHLDHLDEGLRMKQVDSILRFADGHHHILAGGLNALDASDYSADRWAAIAKYHEEIGKPPPKSEVMRHLKAKRYVDAKDFAGGRDAGLVVVPNGQDVQGTCKYGTRVDYILASPNSPYSFVPGSYAVVPSMGTSDHHIVMVDVAVAAHDGGGGGGAARRRRRRRVVKVTNKSSARGIFAD</aaseq>

Gene Sequence

<dnaseqindica>1..971#2447..2657#2854..2986#3103..3359#ATGGCGTCCACGGTGAGGCGCGCGTTCCGGTGCCTCCTCGACGGCCTCCGCTCCCTGCCGCCGCGCCGCCGCCGCGCGGGCGCCGGCGGCGGGGCCGCGCGGAGGTCATCCAAGGCGGCACCCCGCGTCGTCGTCATCCGCCGGTTCAGCGGCAAGCTGGATCGCCGTCGGGCCAGCGCGTCGGGAGGGCCGCCGACGCCGCCTGCGGCGGCGGCGGCGGCGCCCGTCACCATCCGCGTGGCGACGTTCAACGCCGCCATGTTCTCCATGGCGCCCGCCGTGCCGTCGCCGCCGGATCACGACGACTACGACGGCGACGGCGAAGGGTGCTCCACGTGGCGCGCCCCGGCCTCCTCCTCCGGCGGCAGCCGGCTGGCGCGGCGGCCCAAGAAGGGCATCCTCAAGGCGCAGAGCAGCTCGAGCGCGCCGCCGCCGCCGCCGTCCCCCGAAGTCGAGCTGCTGCGGCGGCGGCGGCACGTGTCGATCAGCCTCCCCGACGACGACGACGAGATCGCCCCGCACCACAGAAGGAACAGCAGCAGCAGCAGCAGCAGCGCCAGCGCGCGCCTCGTGACGAGGCCGGCGGCGGCGACCAGCGGGAGCGGCAGGTGGAGGTCGGTGTTCGGGGCGGTGTGGGAGCACCAGAACCATTACCAGCAGCGACGGCAGAAGCAGAAGCAGAAGCAGGAGCGGGAGCAGGCGACGGCGAGGCACCGGAGCAGCAGCGGCGCGGCGCGGCGGCGGAGCGTGGCGGAGGCGCTGCGGGAGGCGGGCGCGGACATGGTGGCGCTGCAGAACGTGCGCGCGGAGGAAGGGCGCGGGATGCGGCCGCTGTCGGAGCTCGCCGAGGGGCTCGGGATGCGGTACGTGTTCGCCGAGAGCTGGGCGCCGGAGTACGGCAACGCCGTGCTCTCCCGCTGGCCCATCAAGCGCTGGAACGCGCGCCGCCTCGCCGACCACTTCGACTTCCGGTACGTACGTCACACCCGCGACATACGTCAGATCGTCATCACCACGCACGCCATGGCCGCCACCATGCGTGCCTACATTTGCTGCCTTACTAGCTTCGAATCACGCATATCTTTTTCACGAACACGTAAAAGGATTGCACGGCGGTATATTAGCAGAAAGCAATACCGAATCATGCATATCATTGGCATTGCAGTAATTACATCGTCTCATATCTTAATTACATTACATTACACGTGCGCACTTACATACATGCCATCCAAAGTTCCAAACAATTATGAAATTTTGACATTTGGGAAAAAAATTAATGACTATAGATTATGCTGTTATTAAGACTAGTAAAATCAAATCAAATCCAGCTGAGCATAGTTTTACACTATTTACGACCAAATTAGCGTTTCTCCCTCCTCCATATGTGGTTCAAGTTTAGTTTTGCATCTGTGTTAGATGACAAATTGCCCCTTGACTATCAATAACGAAGCTTTATACTATTTGATGATATGCACGAAACGAGGACACGTTGCTATCAAAGTCTATCCCTTCAGTAAGTAGACAACCACCAATATAATACTATTTGTATTTCTGCATACATAGGAGAGCAAGTCAAAACTTTTGACAGAAACAACAAAAAGTAGCTGATTTTTCTTACTTTCTCCATATTCTTAAGTTAAGTGGCAATTATCATATACGACAATGGGACGATGACAATTTAGATGAGAAGGGCATACGTATGTATGCACTTTGGCAAGTACAATCACAAAAGATTAGTCATGGAGTAAGTGTAGCTGAAATGTTGCCTTTTTTCCCCCACTTAATATAACAGTAGTTGATGAAATGCTTACCCAATGGACTCAGCCTGATCTAAGCTAGTAACTGAGCTAAAAGGAGAATTAGGTTAGCTGCTCCATAATCATCGAGAGGCCAACAGCTAGCAATCAGCAAAGGTTGCTGCAGTGTCGATCGATGGGTCACAATTATTATCGCGACAGGATTAGTAGCGTGACATCATCAAATTATTAATGCTTTGGTTCTTCATTAAACTAGCTGCCACAGTAGGCCACACGGGCACCTCGATCGCACTTAATAGGTCCTGCCGGTGTACCCAACGTGAGTATACATACGCACATTCTAGCTCGGAGACAACAAACAACAAAAAATGCGTTCATTTGAATCAAACATGCATTATAGGGGCTCATTTAAGACTCTAATCGAATTAATAATGGTTATTTTATTCAGCAGGTGAGAAGCGTGACTCATCCATCCACTGCACAAATTAAGACAAAATGTCCCCAAAATCCTAAATTAATTCCAAGCTAGTAGCATTCAGAACATAAATAGTTGGAGAGAGTAGCAGCGTATGTGTATGATTAGGCCTGAATTTGGTATGGTTAAAATCCTAGATAAGTTAATGATCAAGAACAAGGAACACAGTAAGTAAGAGAGTAACAAACATATTAATAAGGCATTAATGGTGCAGGAACGTGATGAGAGCCACCATTGAGGTGCCGGGAGCCGGGGAGGTGAACCTGTACTGCACCCATCTGGACCACCTCGACGAGGGCCTCAGGATGAAGCAGGTCGACTCCATCCTCCGCTTCGCCGACGGCCACCACCACATCCTCGCCGGCGGCCTCAACGCCCTCGACGCCTCCGACTACTCCGCCGACCGCTGGGCCGCCATCGCCAAGGTACATACCACACACCAATCAATCTATTAAGTTGCATGCACCAGCCAGTTGCACCTAAAAGCCTAAGCTGATAGGGAAAGATGGTCAATTCACTTTATACATTCCAACACAATCAATCAATCGATTTTTGTCCAAGAAACCATCCTGATCCATCCTGATCATGGGCAATTTCCGGCCGGCGGCGGCGTGCGTGCAGTACCACGAGGAGATCGGCAAGCCGCCGCCGAAGTCGGAGGTGATGAGGCACCTCAAGGCGAAGCGCTACGTCGACGCCAAGGACTTCGCCGGAGGGCGTGACGCCGGCCTGGTGGTGGTTCCCAATGGCCAAGGTTAGATTACTGACAAATCTTATCGCTTGCAGAATTATTCCGGCGATCTGTAGCTGCTGCTAATTAACATCGCTGAGATCTTCTTCTTCTTCTTCTTCCATGGTGGTACGGTGCAGATGTGCAGGGGACGTGCAAGTACGGCACGAGGGTGGACTACATCCTGGCGTCGCCCAACTCGCCGTACAGCTTCGTGCCGGGGTCGTACGCCGTCGTTCCGTCCATGGGCACCTCGGATCACCACATCGTCATGGTGGACGTCGCCGTCGCCGCCCACGATGGCGGCGGCGGCGGCGGCGCGGCGAGGCGGCGGCGGAGGCGGAGGGTGGTGAAGGTGACGAACAAGAGTTCGGCGAGAGGGATATTCGCCGATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012663