Os12g0456100
| Gene Name |
Os12g0456100 |
|---|---|
| Description |
Tetratricopeptide-like helical domain containing protein |
| Version |
NM_001073260.1 GI:115488481 GeneID:4352171 |
| Length |
3354 bp |
| Definition |
Oryza sativa Japonica Group Os12g0456100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 12:15990542..15993895 |
| Sequence Coding Region |
15990542..15993895 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008405:15990542..15993895 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008405:15990542..15993895 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgacgaggagcgccgccgccaggctgctctcctcctcctccgccgccgccgccgcctctcccctttggtccagacgccggcgccgccatccattcctccatccgccctcccgctccaagaccacctcctcctcctccagcagcagcaagcctcctcgccgcccaccgcctcgcaaggacggcggcgggccgcgcccgtgcctcttccaagaactctccggtctcgtcgccccatccgccagcgatgaccccgcgtttcagcctcggcgagatgggcaggagcggtgtggcctcctcggccatgacactgcgcagtgcgcggaaggtgctcgacgaattacccctgagggagcggctgcggcttctggttctttcaccggtagcgttccgaacaatgacgctcttgggttccttcctgatggtgggattgggcctcgtagcactgcaacaggcggtgctccggacagtgagcaatctatccaggaggtgggcgatggaaatgctggagatgttgagaatatcagtgaggttgtgcatagggtaacagaagttttgcgggcagaggtgcctggattgtctgtggaacagaggctggagaacctgggagttacatatacaccgaggcttgtgagcttggtgctcaacaggtgcttcaagaagaggcatttggggttcaaattctttgactgggttaggcaagttcctggattccagcacaccacggagacgtacaacgcaatgctgtacattgcgggtgaggagaggaactttggggccatggagaagttgatggatgagatggataaggagatgtgtttgaaggacatcaagacatggacaatcgtcatatccagttatgggaaggcaaggcagattggcaagatgctatctacctttcaggctatggggaaatcgagacatgtggcagcagatagtaaagtttataggacgatacttcatgctttatgcaattctgcaaagtccgagcttgctcttgagttctacaaagatatggcaaggaacacggaggttggatctgacatttttcgacttctattgtgttgtctcgcaggatcagataatgctgaaggtgttttttatgtcagagatgatatgattaagagcatgaagtatccagaggagtattgttatctggaagctctacggagcttctgtgtttcaggaaaaatagaagaggctcagaaaatcttccagcagatgatgaacaagtccattgctagctcatctgcatttgaaatcctattgaggggcctttgcaaagatggaaggatggataaagctcttcaagttatggagtacatgaaaagcaactcatctgcgagcagtgccacctttggttctctcattgatggctacctgaggaaaggagagcgtatgaaggcacttgaggtgcttcaggaaatgagggaatatggatgtgttccattggcatcatcttatactcagctcatgcaacacctctttgcatttgatcaacatgaagcagcatgtagattgtatgaggaaatgcaggaaaatggtattgaaccagatgttgtggcaatcacagcactgataggtgggcatgttcgtaatggacatatatctgaagcatgggatgcatttaggaatatcaatgagaatggtcagaaacccacattgaaagcttatacagtgttcatccaagagctctgtaaggcctccaggccccttgaagcactaaaacttctgaaggaaatgctggaatcagatttcaggccttccgagcaaactttcagcaggattatttccactctgtatgacaatcactatttggaagaagctagcaatattgagaggatgcgagcatcttttaattgttgtagccctatagaagagctgcaacgcagaacattggatcaagttgactacactgataaatttgaaaaatcatctggatctggtccggaagagaaggaaaggacagtggagtttgttggtcatccttcgtataaagactgtgaggtctcagggagctttccttgtgatgacacacaggatttagaacaagcaaaggattacaacaatgaagacgttgaacaaatatgtcggattctgtcatcttctgattgctggagctcaatagaacaggctttagagatgacatcaatatcttttactccagatcttgttgatgccattatgaagcgttgtaaggcaaacagtcgtgctgctttacaatttttttcttgggtaggcaaacgatcttactacatgcagacaacaaagacatataacacagccataaaactcgctggctctgcaaaagattttaagcacatgaggcatctttacagagagatgatatgggcagagtgttgcccaacagtggatacatggaatgtcatgatttgtcagtatggaaatgctggtctaactgaaatggcccttgaaacattctaccagatgaagcagggtggctttcagcctgacaaaactacttacagtcacctaataatgtacctcagccgcagaaaagggaggaaagtagatgctgcagtcaagattttccatgaaatgtgtcgtgcaggctatatacctgacaatggaatggtttgcacatatctttctgtgttatgtgagtgtgggatgatagatcgtgctgaaagctcagtagtactattatgtaaacatggattttctattcaggctggctactccatactcattagatcattgtgcaggtctgatagaatggccgaagctctcagtttgttcgataatattaagaattatggatgttcaagaagtgcatacatgtatgggagtctcattcacgcgttgttgaggagggatcgctttgaagatgcttcagctaagcttgcagaaatgaagaatttaggtatagctcaaagcacacatatgtatacctcattcatgatctattacttggggaaaagggatgtttccaaagcgatggatgtacttaaggagatgacagaaaatggatgtgagcctactgttgtcacttactctgcattgatccgtggtcacatggcaatgggtatggtttcagaggcttgggatgtcttccaacgcatgaaactgaagggacctgtgccagactttgagacctactcaatgttcatgtcatgcctttgtaaggcaggtagatcagaggatgggttgcagcttattcatgacatgctgaatagtggtatcatccccagtgcagtgaacttcagaactgttgtccatggtctgaatatggagggcaagtacaagctagctgattctgttctccagtcaaaatggcaattgcggaatcgaaggaccttctcagattcgtttattgtcaattcatctgcttaa</cdnaseq> |
| Protein Sequence |
<aaseq>MATRSAAARLLSSSSAAAAASPLWSRRRRRHPFLHPPSRSKTTS SSSSSSKPPRRPPPRKDGGGPRPCLFQELSGLVAPSASDDPAFQPRRDGQERCGLLGH DTAQCAEGARRITPEGAAAASGSFTGSVPNNDALGFLPDGGIGPRSTATGGAPDSEQS IQEVGDGNAGDVENISEVVHRVTEVLRAEVPGLSVEQRLENLGVTYTPRLVSLVLNRC FKKRHLGFKFFDWVRQVPGFQHTTETYNAMLYIAGEERNFGAMEKLMDEMDKEMCLKD IKTWTIVISSYGKARQIGKMLSTFQAMGKSRHVAADSKVYRTILHALCNSAKSELALE FYKDMARNTEVGSDIFRLLLCCLAGSDNAEGVFYVRDDMIKSMKYPEEYCYLEALRSF CVSGKIEEAQKIFQQMMNKSIASSSAFEILLRGLCKDGRMDKALQVMEYMKSNSSASS ATFGSLIDGYLRKGERMKALEVLQEMREYGCVPLASSYTQLMQHLFAFDQHEAACRLY EEMQENGIEPDVVAITALIGGHVRNGHISEAWDAFRNINENGQKPTLKAYTVFIQELC KASRPLEALKLLKEMLESDFRPSEQTFSRIISTLYDNHYLEEASNIERMRASFNCCSP IEELQRRTLDQVDYTDKFEKSSGSGPEEKERTVEFVGHPSYKDCEVSGSFPCDDTQDL EQAKDYNNEDVEQICRILSSSDCWSSIEQALEMTSISFTPDLVDAIMKRCKANSRAAL QFFSWVGKRSYYMQTTKTYNTAIKLAGSAKDFKHMRHLYREMIWAECCPTVDTWNVMI CQYGNAGLTEMALETFYQMKQGGFQPDKTTYSHLIMYLSRRKGRKVDAAVKIFHEMCR AGYIPDNGMVCTYLSVLCECGMIDRAESSVVLLCKHGFSIQAGYSILIRSLCRSDRMA EALSLFDNIKNYGCSRSAYMYGSLIHALLRRDRFEDASAKLAEMKNLGIAQSTHMYTS FMIYYLGKRDVSKAMDVLKEMTENGCEPTVVTYSALIRGHMAMGMVSEAWDVFQRMKL KGPVPDFETYSMFMSCLCKAGRSEDGLQLIHDMLNSGIIPSAVNFRTVVHGLNMEGKY KLADSVLQSKWQLRNRRTFSDSFIVNSSA</aaseq> |
| Gene Sequence |
<dnaseqindica>1..3354#atggcgacgaggagcgccgccgccaggctgctctcctcctcctccgccgccgccgccgcctctcccctttggtccagacgccggcgccgccatccattcctccatccgccctcccgctccaagaccacctcctcctcctccagcagcagcaagcctcctcgccgcccaccgcctcgcaaggacggcggcgggccgcgcccgtgcctcttccaagaactctccggtctcgtcgccccatccgccagcgatgaccccgcgtttcagcctcggcgagatgggcaggagcggtgtggcctcctcggccatgacactgcgcagtgcgcggaaggtgctcgacgaattacccctgagggagcggctgcggcttctggttctttcaccggtagcgttccgaacaatgacgctcttgggttccttcctgatggtgggattgggcctcgtagcactgcaacaggcggtgctccggacagtgagcaatctatccaggaggtgggcgatggaaatgctggagatgttgagaatatcagtgaggttgtgcatagggtaacagaagttttgcgggcagaggtgcctggattgtctgtggaacagaggctggagaacctgggagttacatatacaccgaggcttgtgagcttggtgctcaacaggtgcttcaagaagaggcatttggggttcaaattctttgactgggttaggcaagttcctggattccagcacaccacggagacgtacaacgcaatgctgtacattgcgggtgaggagaggaactttggggccatggagaagttgatggatgagatggataaggagatgtgtttgaaggacatcaagacatggacaatcgtcatatccagttatgggaaggcaaggcagattggcaagatgctatctacctttcaggctatggggaaatcgagacatgtggcagcagatagtaaagtttataggacgatacttcatgctttatgcaattctgcaaagtccgagcttgctcttgagttctacaaagatatggcaaggaacacggaggttggatctgacatttttcgacttctattgtgttgtctcgcaggatcagataatgctgaaggtgttttttatgtcagagatgatatgattaagagcatgaagtatccagaggagtattgttatctggaagctctacggagcttctgtgtttcaggaaaaatagaagaggctcagaaaatcttccagcagatgatgaacaagtccattgctagctcatctgcatttgaaatcctattgaggggcctttgcaaagatggaaggatggataaagctcttcaagttatggagtacatgaaaagcaactcatctgcgagcagtgccacctttggttctctcattgatggctacctgaggaaaggagagcgtatgaaggcacttgaggtgcttcaggaaatgagggaatatggatgtgttccattggcatcatcttatactcagctcatgcaacacctctttgcatttgatcaacatgaagcagcatgtagattgtatgaggaaatgcaggaaaatggtattgaaccagatgttgtggcaatcacagcactgataggtgggcatgttcgtaatggacatatatctgaagcatgggatgcatttaggaatatcaatgagaatggtcagaaacccacattgaaagcttatacagtgttcatccaagagctctgtaaggcctccaggccccttgaagcactaaaacttctgaaggaaatgctggaatcagatttcaggccttccgagcaaactttcagcaggattatttccactctgtatgacaatcactatttggaagaagctagcaatattgagaggatgcgagcatcttttaattgttgtagccctatagaagagctgcaacgcagaacattggatcaagttgactacactgataaatttgaaaaatcatctggatctggtccggaagagaaggaaaggacagtggagtttgttggtcatccttcgtataaagactgtgaggtctcagggagctttccttgtgatgacacacaggatttagaacaagcaaaggattacaacaatgaagacgttgaacaaatatgtcggattctgtcatcttctgattgctggagctcaatagaacaggctttagagatgacatcaatatcttttactccagatcttgttgatgccattatgaagcgttgtaaggcaaacagtcgtgctgctttacaatttttttcttgggtaggcaaacgatcttactacatgcagacaacaaagacatataacacagccataaaactcgctggctctgcaaaagattttaagcacatgaggcatctttacagagagatgatatgggcagagtgttgcccaacagtggatacatggaatgtcatgatttgtcagtatggaaatgctggtctaactgaaatggcccttgaaacattctaccagatgaagcagggtggctttcagcctgacaaaactacttacagtcacctaataatgtacctcagccgcagaaaagggaggaaagtagatgctgcagtcaagattttccatgaaatgtgtcgtgcaggctatatacctgacaatggaatggtttgcacatatctttctgtgttatgtgagtgtgggatgatagatcgtgctgaaagctcagtagtactattatgtaaacatggattttctattcaggctggctactccatactcattagatcattgtgcaggtctgatagaatggccgaagctctcagtttgttcgataatattaagaattatggatgttcaagaagtgcatacatgtatgggagtctcattcacgcgttgttgaggagggatcgctttgaagatgcttcagctaagcttgcagaaatgaagaatttaggtatagctcaaagcacacatatgtatacctcattcatgatctattacttggggaaaagggatgtttccaaagcgatggatgtacttaaggagatgacagaaaatggatgtgagcctactgttgtcacttactctgcattgatccgtggtcacatggcaatgggtatggtttcagaggcttgggatgtcttccaacgcatgaaactgaagggacctgtgccagactttgagacctactcaatgttcatgtcatgcctttgtaaggcaggtagatcagaggatgggttgcagcttattcatgacatgctgaatagtggtatcatccccagtgcagtgaacttcagaactgttgtccatggtctgaatatggagggcaagtacaagctagctgattctgttctccagtcaaaatggcaattgcggaatcgaaggaccttctcagattcgtttattgtcaattcatctgcttaa</dnaseqindica> |
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