BGIOSGA012667

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Revision as of 09:50, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012667| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012667, complete gene.| tag = OsI_116...")
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Gene Name

BGIOSGA012667

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012667, complete gene.

LocusTag

OsI_11666

Ensembl Transcript ID

BGIOSGA012667-TA

Ensembl Protein ID

BGIOSGA012667-PA

Length

5226

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:15624756..15629981

Sequence Coding Region

15624756..15624770,15625032..15625320,15626900..15627272,15628578..15628796,15629154..15629289
,15629424..15629981

Genome Context

<gbrowseImage1> name=IndicaChromosome03:15624756..15629981 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:15624756..15629981 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTGGGAGCAAGAGGTCAGAGGAGTGGACGAGAGGAAGAGCGGAAGAGCTGAAGGTGCAAGTTCGCAGCAAGCTGTTGAAGGCCAAGAGCGGCAGCAGTGCGGCAGACATGGTGATGCTAGTCGACACGCTCGAACGCCTTGGCATAGACAACCACTTCCGTCACGAGATCGCGGCGATGTTACACCGCGTACACCGCGAGCAGCAGGGGTGCACTGCCGGCTCCGACGACGACGATGACCTCCACATTACTTCCCTTCAGTTCCGTCTACTTCGCAAGCACGGCTTCAGGGTATCTGCAGCTGTATTCGACAAGTTTATAGACAGCAAGGGCAGTTTCAGAGCGACCCTAAGCAGTGACACGAGGGGCCTGCTAAGCCTGTACAACGCGGCTCACATGGCCATGCCTGGCGAGGAGGCGCTGGACGACGCGATCGCGTTCGCGAGGCACCACCTTCGGTCCATACAAGGTAAGCTTAGGTCGCCGATGGCCGAGCAGGTCTCCCGTGCCCTTGACATCCCTCTGCCGCGGGCGCCCAGGCGGCTGGAGACGGTGCGCTACATCGCCGAGTACGAGCACGAGCCAGCTTTCGACGGCGTGGCGCTGGAGCTCGCCAAGCTGGACTTTGAGCTCGTCAGGTCTCTTCACCTCAGGGAGCTCAAGGCCCTCACCCTCTGGTGGAAAGACATGTACAACAGCGTCAAGCTAAGTTATGCTAGAAACCGTATCGTGGAGACTTACTTCTGGACCTGCGGCATATACCATGAGGAGGAGTACTCTCGCGCACGTATCATATTCACCAAAGTTTTTGGACTCATGTCTTTGATGAACGACACTTACGACGCACACGCCACCTTAGAGGAGTGCCACAAGCTCAACAAAGCTGTACAGAGATGGGATAAGAGCGCGGTCTCTATTCTACCCGAATATCTTCATGTCTTCTACATAAAGTTACTGAACAACTTTGACGAGTTAGAGGATTGCTTGGAGCCAACCGAGAAGTACCGCATGTCTTACGCCAAAACTGGGTACAGGCAGTTGTCGGAATACTACCTCCGTGAGGCCCAATGGTCGAGCGACAAATACACGCCCAGCTTCGCCGAGCACCTGGACCTGTCTGCCATGTCCTCCGGCTTCCCGCAGCTGGCCCCGGTGGTGCTGTTGGGCGTGCGCGACGGCGACGGCGCGGCCACCGCGGAGGCGTTCGGGTGGGCGGCTGCCGTCCCCGCCCTGGTCCGCGCCAGCGCGGAGCTCGCCCGCTTCCTCAACGACACCGCCTCCTACAAGACCGGGAAGAGCGGCAGGGACATGGCGAGCACAGTGGAGTGCTACATGGCGGAGCGCGGCGTGGGCGGGGAGGAGGCCGTGGCGGCGGTGGCCGCGATGGCGGAGAGCGCGTGGAGGACGATTAACCGGGAGTGCGTGGAGATGGATCGGGCACTGCTCCCGGCGGCGCGGCTGGTGGTGAACCTGACGAGGATGCTGGAGGTGATCTACCTTGGTGGCAGGGACGGGTACACCGCCGGCGCCGACATCAAAGACCTCGTCACCAACTTCTTCCTCGCAACGCCCTCCCAGTTTAACTAG</cdnaseq>

Protein Sequence

<aaseq>MSGSKRSEEWTRGRAEELKVQVRSKLLKAKSGSSAADMVMLVDTLERLGIDNHFRHEIAAMLHRVHREQQGCTAGSDDDDDLHITSLQFRLLRKHGFRVSAAVFDKFIDSKGSFRATLSSDTRGLLSLYNAAHMAMPGEEALDDAIAFARHHLRSIQGKLRSPMAEQVSRALDIPLPRAPRRLETVRYIAEYEHEPAFDGVALELAKLDFELVRSLHLRELKALTLWWKDMYNSVKLSYARNRIVETYFWTCGIYHEEEYSRARIIFTKVFGLMSLMNDTYDAHATLEECHKLNKAVQRWDKSAVSILPEYLHVFYIKLLNNFDELEDCLEPTEKYRMSYAKTGYRQLSEYYLREAQWSSDKYTPSFAEHLDLSAMSSGFPQLAPVVLLGVRDGDGAATAEAFGWAAAVPALVRASAELARFLNDTASYKTGKSGRDMASTVECYMAERGVGGEEAVAAVAAMAESAWRTINRECVEMDRALLPAARLVVNLTRMLEVIYLGGRDGYTAGADIKDLVTNFFLATPSQFN</aaseq>

Gene Sequence

<dnaseqindica>1..15#277..565#2145..2517#3823..4041#4399..4534#4669..5226#ATGTCTGGGAGCAAGGTAATTAGTGTTCTCGATACGGAGATGCTCGCTGTTAACGGTGGCACTGGCACACCGCAAGAGACTGCCTCTGCCACAGCCGCTGCCCAAACTTTTGCCCCGTCCGTGTGGGGCGACTTCTTCGCCACCTACACTCCTCCCAACTCCAAGGCATGCTGATTAATTAAATATATGCTTGATTAAAGAAGTTTGACAACATATTAATTACTTCAGCTAGATAGCTTTTATATTTATGTATACGCGAAATTCTCATGCATACAGAGGTCAGAGGAGTGGACGAGAGGAAGAGCGGAAGAGCTGAAGGTGCAAGTTCGCAGCAAGCTGTTGAAGGCCAAGAGCGGCAGCAGTGCGGCAGACATGGTGATGCTAGTCGACACGCTCGAACGCCTTGGCATAGACAACCACTTCCGTCACGAGATCGCGGCGATGTTACACCGCGTACACCGCGAGCAGCAGGGGTGCACTGCCGGCTCCGACGACGACGATGACCTCCACATTACTTCCCTTCAGTTCCGTCTACTTCGCAAGCACGGCTTCAGGGTATCTGCAGGTACAATAACATACTCTCCACTTTTTTTAATATATAACACCGTTCATTTGATCATTCATCTTATCTAAAAAAATCATATAATTATCATTTATTTTATTGTAACTAGATTTATCATCAAATGTTTATATGCCTGATTTAATTTATCTATTTGCACAATAATTTTAAATAAAATGAATGGTTACACGTTTATAAAAAGGTTAACCGTGTTATATATTAAAAAACGGAGGTAGTATCAACTCTCCGGAATATGAAGGTTCCTAGCTAAACACCTGAACAAATATATGCAGATCTGAAAAGGTATACCGTCTAAGTACATAGCTGGGTCGATTTTTAAATCTGTACATATGTAGATGCAAGATATATCCCATACATATATGTATACATATACATACACACATATGTGTGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATAGAGTAATTGAGAATTTTGAGGAAGCACCTATGTTAACAAAATAATCTAGATCATGTCCTAATACATATACATATGTAGATTAATTAGATTTTCGCAACAATATATTAACCTAGAAATCCAGAATCAATAAATATGGGGCCGTAACAGCTCCATCGTTTGCTGGCTGTGTTCGTTTCACTATGTTCCCAACTCCTCTCCCTCGTGTTTCATACGTACGCTTTTCAAACTGCTAAACGGTGCGTTTTTGCAAAAAAAAATTATATATGAAAGTTGCTTAAAAAAATCTTATTGATCCTTTTTTTAAAAAAAATAGTTAATACTTAATTAATCACGCGCTAATAGACCACTCCGTTTTTCGTGTGGAGGGAATGAGTTCCCATCCCAAAGGAACAAACGCAGCAATATTCTCTTAGCAACCGCGGCCAAAATTTAAAATAGGAAACCTAATTTTATATTTGATTTTGATAATTTTTTATTATAGTTTATTTTCCAAAATCGTTTTTAAATCATTAAAATACAAATATAAATGTTTTATCTATAAATTCGTTTCAGCTGCATCGTTCATTTTTTTCACGGCTTATCAGTATTTCCGCAAACATGACTGTAATTTTAAAAGTCAAAATTAAGAGTTAGAGACTTGGGAAATATCATGCATGGACTCTTCTTTCAATCTAATCCACTCCAATTAAGAAATAAATTCGAAATTCATAATTATAAAGAAGTGCCCATTCCAGAGTGTCAATTTAGCATTTTATTAATTTAATTCTGAAATTAATAATTAGCCAGTTGAAACTGATTTTGAACTCTTTTTTAATCTAATATAAATGCAAGGCCGAACAATAAATTATTCCATTATAGAAGAAATACAAAGTTACAATTTGCATGATGTTGCAATTCATTAAAAATAAAATTACATGTAGAAATATTCAAACTTGGATTAAAAGAAAATATAATATAAAATTGTGGTTAAGAAAAGAAAAATTGCATATAGCATATGCCACTGCAATTTTCGGCTCCGGAACGTGCAGTCTTAACTACTAGGTGACTGGAAATTTTCAGGCACCTGAAATATAGCAATCCTATAGTAACATACATGAGTTCTTCACTAATACAAAATATTTACTGCTGTAATAGCTGTATTCGACAAGTTTATAGACAGCAAGGGCAGTTTCAGAGCGACCCTAAGCAGTGACACGAGGGGCCTGCTAAGCCTGTACAACGCGGCTCACATGGCCATGCCTGGCGAGGAGGCGCTGGACGACGCGATCGCGTTCGCGAGGCACCACCTTCGGTCCATACAAGGTAAGCTTAGGTCGCCGATGGCCGAGCAGGTCTCCCGTGCCCTTGACATCCCTCTGCCGCGGGCGCCCAGGCGGCTGGAGACGGTGCGCTACATCGCCGAGTACGAGCACGAGCCAGCTTTCGACGGCGTGGCGCTGGAGCTCGCCAAGCTGGACTTTGAGCTCGTCAGGTCTCTTCACCTCAGGGAGCTCAAGGCCCTCACCCTGTAAGTCTCTTCACTTCTTTGCCTCTTGACTCTTCAGCCCACATGCTCCCTACTTAAATTTTCCTCTCATTATACAGAAATATTTTTTTCTATACAAGACACTCACGGATCGTAACTGGTCGAGTCTGCAAAAATCAACCTCTATTTTCACATATAACTCGTTAAAAGTACCGCCCGCAAAAATCAATTTTCATAGGTGAGCCTTTTAAGAATCCGCACGCAAAAATAAGCCTATTTTTCAGGTGAACCTTTCAAGGGGCCGCACACAAATATATATTTTCACAGGCGGGCCTATTAAGGATCTGCCTAAAGTCTAAGTTACATCCTTGTATCCCTCTTAAACACTTCAAAATATTTCATTCTTATCCACTCATCTCTCTCACTCCTTCTCTCCGCATTACTTTCTCTCCACTCTCACACCTCCTATCAAACACGTGGCCAGCGGCAGGTGGCGGGCAGATCCACCTCCGTTGGGCCCATGATGGCCCAATCTGCCGCACATGGGCCCAATCTGCCGCCGCCAGACCCGTGACAACTGGATCCACAGGCGGCGGGTAAAGCGGCCAATGGCAGGAGACGGGTAAAGCGGCCAGTGGCGGGAGTCGGGTGAATCAGCCTAGCAACGGGTGGCGGGCGACGCGCCCGATGGTGAGAAGCGGGTGCCGCCCAAATCTCGCAGCGGCGGGAGGAGCCCAGGGGCAGCAGCTAGGGTTTTGATTTGTTTTACGATTTTTATTTTTTCCGGACTTTTATTTTTGCATGCGGACAACATAAGCACCCGCACACGCAAACCGGATTTTAGCGCATGGGTGCACCACCTGCATGGACAATTAGTGATTTTCGCATACACTTTCCGGGCAAACGGGCCGGAGGTTGGTACGTAAAAATCACTTTAGGACCATCTGGAAAAATTGTTTTTTTTACTGGTGTTTATTTCGTGTTATAAGTCATCTTAAGTTTTTTTTACTAAGTTAAACTTAAGTTATAAGTTTGATTCAATTTATAGAAAAATTTATAAATCTACGATACCAAATCGATTTCATTAAAAATATCATTTAGTTTATTTTAATAATATGTTTGTTTTGGGTTGGAAATGCTGCTTTATTTTCTTATAAAGTTAAACTTAAAAATTTGATTAAATAAAAGTTAAAACGGTATATAATACGAAATTCGAACGGATGTAGTAGTCACCAATTAGCCATGTCAATCTATTATGACTAATAAGTGCGTGTTCACAATTGCCAAATTCAACAATTAATTAGTTCAAACTAGCTCTTGGTTGATTTCATATGTATGTTTGCGCAGCTGGTGGAAAGACATGTACAACAGCGTCAAGCTAAGTTATGCTAGAAACCGTATCGTGGAGACTTACTTCTGGACCTGCGGCATATACCATGAGGAGGAGTACTCTCGCGCACGTATCATATTCACCAAAGTTTTTGGACTCATGTCTTTGATGAACGACACTTACGACGCACACGCCACCTTAGAGGAGTGCCACAAGCTCAACAAAGCTGTACAGAGGTTTTTTTTTTATGAACAAAAGATGTACTTATATAAAAGTTAAGAGCAACTTTACAGTCCTCAAGGAGGTAACATGAGATACCACTTTTTTCTATTATAAATTTAGTACCTTATAGTATCTAGTTATCAAGAGGTACTAAATTTACACTAAATTTTTGATACCTCATAACATCTTCTCAAGTACTGTAAAATTGCTCAAAAGTATCTAGGTATTAAGAAGTACCAAATTTACAATTTTTGATACCTCATGAGACCTACTCAAGTACTGTAAAATTGCTCAAAAGTTAACGATGGTCTAGTTGTTATGTAATTTGCCAACAAAGAGCACTAAATTAGTTTATCCTTGTATGTATGTAGATGGGATAAGAGCGCGGTCTCTATTCTACCCGAATATCTTCATGTCTTCTACATAAAGTTACTGAACAACTTTGACGAGTTAGAGGATTGCTTGGAGCCAACCGAGAAGTACCGCATGTCTTACGCCAAAACTGGGGTAAAATCCTGGCACACAGAAAATGATCGACATATTCAACGTGCACGTTCGATCATCATATTCATCCACACAATTAATTAATTGTTGCTCCTGCACCTACCATAATTTAATTATGTCTTATATACATGCTACAGTACAGGCAGTTGTCGGAATACTACCTCCGTGAGGCCCAATGGTCGAGCGACAAATACACGCCCAGCTTCGCCGAGCACCTGGACCTGTCTGCCATGTCCTCCGGCTTCCCGCAGCTGGCCCCGGTGGTGCTGTTGGGCGTGCGCGACGGCGACGGCGCGGCCACCGCGGAGGCGTTCGGGTGGGCGGCTGCCGTCCCCGCCCTGGTCCGCGCCAGCGCGGAGCTCGCCCGCTTCCTCAACGACACCGCCTCCTACAAGACCGGGAAGAGCGGCAGGGACATGGCGAGCACAGTGGAGTGCTACATGGCGGAGCGCGGCGTGGGCGGGGAGGAGGCCGTGGCGGCGGTGGCCGCGATGGCGGAGAGCGCGTGGAGGACGATTAACCGGGAGTGCGTGGAGATGGATCGGGCACTGCTCCCGGCGGCGCGGCTGGTGGTGAACCTGACGAGGATGCTGGAGGTGATCTACCTTGGTGGCAGGGACGGGTACACCGCCGGCGCCGACATCAAAGACCTCGTCACCAACTTCTTCCTCGCAACGCCCTCCCAGTTTAACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012667