BGIOSGA012680

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Revision as of 09:50, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012680| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012680, complete gene.| tag = OsI_116...")
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Gene Name

BGIOSGA012680

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012680, complete gene.

LocusTag

OsI_11689

Ensembl Transcript ID

BGIOSGA012680-TA

Ensembl Protein ID

BGIOSGA012680-PA

Length

4338

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:15837979..15842316

Sequence Coding Region

15837979..15838234,15840275..15840408,15840496..15840609,15840681..15840800,15840882..15840913
,15841185..15841356,15841437..15841535,15841677..15841750,15842023..15842212
,15842311..15842316

Genome Context

<gbrowseImage1> name=IndicaChromosome03:15837979..15842316 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:15837979..15842316 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGAAGCTTTACATGCTTCTGCTCTTCCTCATCCTCTGCGGGACGCCGCATGCGGCCACCACCACTGCCGGCGATGGCTTGGGCTCGGGATCATTCTCGCGCATGTTCAGCTTCGGCGACTCCGCCACCGACACCGGTAACGGCGCGACCGTCAATCCCAACTCTTCTTCCAACATGCTCCCCTACGGCGAGACCTTCTTTGGCCACCCCACCGGCCACTTCAGCGATGGCAGGATCACCGTCGACTTCCTAGTCATGGGTCATAGAAAAAGATCAAAAGTGGATATTTCTAGTGAATCTAACAGTGACAATGATTGTAGTTTGAGTTCTGATAATCATGATAGTGATGTTCATTTATCTAACCATGATGAAAGTTCTGATAATCATGACCAACATTTTGAGGAAAATGATCCTTTGCTTCATTTAACTAAAGAAGAGCTTATGAAGAAATTGAAAATAAAGCTTGGTAAAAGGCCATTTACAGATGACCATAAAAAGAAGAGACATAAAGTTGAATCAGACTCAATTATCGATGATGCATTGTTAGAGATTCACAATGATCTAGTTCTCCATTATTTGAAAATGAAATTAAGCATGCTTGGTGAACAGTCTAAAAATAAGAGAAAAACCTTTGAGAAAGATAACCAACAAGGTCAAGAAGCTGTTAATATTGATGGAGTTCACTGCAAATTCTCATCTTTTGGTTCTTCATTCAAACAAGGTGGAGAATTATCAAATTTTGTAATGTCTGTGTTCTGTCGATATATGTTTAAATCGATTCATCCTTCAAAATCCAAAAGACACTATTTCTTCTCTTCAATTGGGAATGATCTTATGAAACACCCTTCAAAAACTAATTTTGGAATGGTCCAAAAGAGTTTTTCTGGAGCATCACTTGCTAGACCCATTGAGATATGTGACATGATGAGAGTTTTGTTTTCATTGACTCCTTATTTGAAGAAGAAGAAGACTATCAATACAATGCTAGATGCAGACTGCCTTGATTGTGGTATTTTTACTCTGAAATTCATGGAAATTTGGCGTCCAAAAGTTCTGCTAACCAACCAGTTCTCTCAAAAAGACATTCCTAACATAAGGATTCAATATGTCAACAAATTGTTTTTCCATCCATGCAACATTGTGCTGAACTCTGCAACAAAGAAACTTGTTACTGACTATTATGCAAAGGGCTGA</cdnaseq>

Protein Sequence

<aaseq>MTKLYMLLLFLILCGTPHAATTTAGDGLGSGSFSRMFSFGDSATDTGNGATVNPNSSSNMLPYGETFFGHPTGHFSDGRITVDFLVMGHRKRSKVDISSESNSDNDCSLSSDNHDSDVHLSNHDESSDNHDQHFEENDPLLHLTKEELMKKLKIKLGKRPFTDDHKKKRHKVESDSIIDDALLEIHNDLVLHYLKMKLSMLGEQSKNKRKTFEKDNQQGQEAVNIDGVHCKFSSFGSSFKQGGELSNFVMSVFCRYMFKSIHPSKSKRHYFFSSIGNDLMKHPSKTNFGMVQKSFSGASLARPIEICDMMRVLFSLTPYLKKKKTINTMLDADCLDCGIFTLKFMEIWRPKVLLTNQFSQKDIPNIRIQYVNKLFFHPCNIVLNSATKKLVTDYYAKG</aaseq>

Gene Sequence

<dnaseqindica>1..256#2297..2430#2518..2631#2703..2822#2904..2935#3207..3378#3459..3557#3699..3772#4045..4234#4333..4338#ATGACGAAGCTTTACATGCTTCTGCTCTTCCTCATCCTCTGCGGGACGCCGCATGCGGCCACCACCACTGCCGGCGATGGCTTGGGCTCGGGATCATTCTCGCGCATGTTCAGCTTCGGCGACTCCGCCACCGACACCGGTAACGGCGCGACCGTCAATCCCAACTCTTCTTCCAACATGCTCCCCTACGGCGAGACCTTCTTTGGCCACCCCACCGGCCACTTCAGCGATGGCAGGATCACCGTCGACTTCCTAGGTAAACACACATCTTAACTCTTAATATATATAACGGGATGGCTATTTGGCAGTCGCATGTTTTTTCTTGGCTCTATCATTCGTTTTTTAAGCCGTCGGATTTCTTTGTGATTCGTCCTGGCTTGTAGTTCATTTTGTAGTATCGGTGTGTGGGCTTATGAGCTTTTTATTTGTGTCTGGGCTTTTGGGCTTTTTTTTTGTGTGTGGTAATTATGTGGGACCCACATCAGAAATTTTTTTCGACAGCCTGTGTGGGACCCATGGGCACTGTTCGAATTTTGAAATCCGCAATTGTCTTTTTTGTGCCGACGGAGAGAGAGTGAGTCAGATAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATATTTCTCTCGTTCTCGTCGTCTCAGGCGACGCGGCGGCGATTCCGTCGGGCGGAGCGGCGGCGTTTCCGTCGGGAGGAGCGGTGGCGATTCCGTCCGGTGATTGCGCAGTCCTGTTGCGCAGTTTGCGGGAGGTGAAGGTGGCAGATTTATTTTCCATTTTTTATCGATTTCTTCTTCTATTTGTTGCTCTTGTGTTGATTCATCTCTTCATTTTTCTCTTCTCATAGTCTTTGGTTTGCTGGTGGCTACGACGCGGCTGTGAAGTTGGAGCTGATTTCGGTGAGTTTCCCCTTCGTTTTTCTGATATTCCCTTGTGTTTTAGGTCGTCGATTCGTGGGGCTTGTAGATCTGAGTTTGTTTCGACTCGGAATCTATGTATGTGTTTGATATGGTGAATCCCCTTGATTCATATTTGTTTATGACTCGATGATCTCTGTGTTCTTAGCCCTATATATTGTCTTCTTGTGCACTAGATCTGCGCTTTTGCTTTTGTCTTCTATATGAAAATTACAGAACATGATGTGGTTGTAGTTGTGAACTAGATCTGTGCTTTTGCTTTTGTGAACTAGTTACGTGCTTTTTTATTTTGTTCTAGAACTGTGTTTTTTGCTTTTTTTCTGAACTAGATGTGTGCAAATAAGGGAGTAATGTACATATGTTCACCTATCTGTATGCCCTGATTGTTTTTGTAGTAATGCATTCAGGATGTTATATGTTAATTCAATGACAACCTTATAGGAGCAGTTAAATTTGTTATTGATATTATCAGTTGTTTTTTGCATGACTAAGATATGCTGGTTTGTACTAAGTTTCAAGTTTTATGTCTTTATTAGAATGGTATTTATGGTTGTTAATTTTTTTTTTGTCTCTGATGCATGTTCCATGTTCAGGTTCAGTATTCAAAATGAGAAGAGTACTGTTATGTTTATGGTTGTGATTTGTGTTCTTAGCCCTAGATATTGTTTATGTGGACTAGATGTGTGATTCATTTCATTTTAGATATATCTTTTTGTGATTGCTTTTTTGCATTTGTGAACTAGATCTGTGCTTTTGCTTTTGTGAACTAGATGTGTGCAATGTACATTTGTTGACCCTTCTGTATACCCTTGATTTGCATGTTCTGTGCACTGATTGATTTTGTAGTAATACTTTGATGTCAGTTTCTAAATCTATGCAAGAAAATGCTATATGCTATTTAGGTGGATGTTTATGCACTGATTCAGGATGTTTTTTTTTCTAGAAATCCACAAATGCTATATGCCATTTGCATTTTAGTTTGGTATTTTTAATCTTTCAATGACAACCTTACATGAGTAAATAACACAAGTTATTGAAGATTTCTGTACTAGAATGTTTTTTATAGTAGTCAATTTTTGTCTCTGCATTTTGCATGCTCAGGTTTAGTATTCAGAAGGAGAAGAGTATTGTTAATACATTTGTTCAGAAGGAGAAGAGTATAGTATTCCTAGTCATCACTATACTCTGATATATGACATGAGTTTGTGCTACACATTTGACACTACTCTATGAAAATAATTATTTCTACTATATGAAAGTAATATTATTTTCATATGACATGGTGCATTTAACTTGTATGTTTTATTCTGTTTTGTTATATATTTTAGTCCATAATACTTATGTTTTGAGATCTTTTTTCTCTCCTTGCAGTCATGGGTCATAGAAAAAGATCAAAAGTGGATATTTCTAGTGAATCTAACAGTGACAATGATTGTAGTTTGAGTTCTGATAATCATGATAGTGATGTTCATTTATCTAACCATGATGAAAGTTCTGATAATCATGTAAGTTCATTTGTCATGTTCAGTTATCATGGAAGTTTATTTTTTATTTGAATATTTTTTTTGAATCTTCTTGTTTTTTTTATTAAGGACCAACATTTTGAGGAAAATGATCCTTTGCTTCATTTAACTAAAGAAGAGCTTATGAAGAAATTGAAAATAAAGCTTGGTAAAAGGCCATTTACAGATGACCATAAAAAGAAGGTATGATTAATGCATATTTAGATTTTTGTAATTTACATTATTTTTTTAATATGATATTTTTTTATTTTCAGAGACATAAAGTTGAATCAGACTCAATTATCGATGATGCATTGTTAGAGATTCACAATGATCTAGTTCTCCATTATTTGAAAATGAAATTAAGCATGCTTGGTGAACAGTCTAAAAATAAGGTAATTTTATTACCTTATTACATTGGTGAATAATTTTTTCTTTAGTTTTTTTAATTTCTTTTCTTTAAATTTTTTTGGCAGAGAAAAACCTTTGAGAAAGATAACCAACAAGGGTGTGTTTTGACTGATTGCAAATTATTGTTTTATATGATCATGATCTTTAATTTTTTATAGTTTTTGATATGCTATGGGATAAGCTTGACACTTTTATATTTACTTGCTGAACATTTAGCTGTGATTGAATGCTTGTGCAAGCATGTGCTGCTCCATGTTAGAATGTCTGCATACATTTTTTTCTTGCAAAATAAACTGTAACTTTAAATATTTTTTCATGTAATTTTTTTCAGTTTCTTCATATATGTAAGTTTTGTACTGTTACTGCAGTCAAGAAGCTGTTAATATTGATGGAGTTCACTGCAAATTCTCATCTTTTGGTTCTTCATTCAAACAAGGTGGAGAATTATCAAATTTTGTAATGTCTGTGTTCTGTCGATATATGTTTAAATCGATTCATCCTTCAAAATCCAAAAGACACTATTTCTTCTCTTCAATTGGGGTAAGTGTTTGTAATTTTTAATTTTTTTATTAAATACAACTCTGTTACTTGCAAATTGAGTATGTATTTTTTTATTTCAGAATGATCTTATGAAACACCCTTCAAAAACTAATTTTGGAATGGTCCAAAAGAGTTTTTCTGGAGCATCACTTGCTAGACCCATTGAGATATGTGACATGGTATGTACTTATGTAATGTTTAATTGAATTAGTTTATATTAGATTTCTCCCCTTTTTACATTTGTTTTTATTGTATCATCTTTTTCAGCTGTTTTTCCCTATATCATTTGAGGCATTGTTTCTGTTTGTTGTTGATTGAAGATGAGAGTTTTGTTTTCATTGACTCCTTATTTGAAGAAGAAGAAGACTATCAATACAATGCTAGATGCAGACTGGTATGATTTTTTTTTTTTTGCAAATTATTATATGTATAGAATAATTTATTTTTATGATTGTTTCATTTTGTCAGATATCAAAATTTTCAATTGTATGGAGGAAATTTGTCCCTGAACATCCAATTAACTTTGCTAGTTTCAAGATAATATACCCACCTCGTCCAAGACAAACAAATCGGTAAATTACAAATGTTAACTCTTTGAATGTTATTTTAATTCTAGTAATTTTTATTATTTATGACTTATGTTTTTTTTTATTTCTGTTTTTTTAGCCTTGATTGTGGTATTTTTACTCTGAAATTCATGGAAATTTGGCGTCCAAAAGTTCTGCTAACCAACCAGTTCTCTCAAAAAGACATTCCTAACATAAGGATTCAATATGTCAACAAATTGTTTTTCCATCCATGCAACATTGTGCTGAACTCTGCAACAAAGAAACTTGTTACTGACTATTATGCAAAGGTAAGTAGTCATCTTAACTTTTTTTTAAAAAATATGTTTTTAAAATTTTTTTCTTCTGTTACCTTTACATTTAGCTTTTTTTTTCTTTTTTTTTGTAGGGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012680