BGIOSGA012714

From RiceWiki
Revision as of 09:51, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012714| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012714, complete gene.| tag = PRX48| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA012714

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012714, complete gene.

LocusTag

PRX48

Ensembl Transcript ID

BGIOSGA012714-TA

Ensembl Protein ID

BGIOSGA012714-PA

Length

1136

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:16163722..16164857

Sequence Coding Region

16163722..16163979,16164096..16164857

Genome Context

<gbrowseImage1> name=IndicaChromosome03:16163722..16164857 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:16163722..16164857 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTAGGCTGGCTGCTCTGCTCGTCTCCTTAGCGATGCTCATGGCGGCGGTGACGGCAGCCCGGGTAGAAAGAGCGGGCGCCGGCTTCTACACACCGCCAAGCCCTTCCACCTGCGGCCTCAAGATCGGCTACTACCACGACAAGTGCCCGCACGCCGAGGCCATCGTCAAGGGCGTCGTCGCCGCCGCCCTCCACCGCGACCCCGGCGTCGGCGCCGGCCTCATCCGCATGCTCTTCCACGACTGCTTCGTCGAGGGATGTGATGCCTCCGTGCTGCTCGACCCGACGCCGGCCAACCCGCAGCCGGAGAAGCTCGCCCCGCCAAACAACCCCAGCCTCCGCGGCTTCGAGGTCATCGACGCCGCCAAGGACGCCGTCGAGGCGGCGTGCCCGGGCGTCGTCTCCTGCGCCGACATCGTCGCCTTCGCCGCGCGCGACGCCTCCTTCTTCCTCAGCGACAGCAGGGTGTCCTTCGACATGCCGTCGGGACGCCTCGACGGGCGCTACTCCAACGCGTCGCGCGCCCTCGACTTCCTCCCGCCGCCGACCTTCAACCTCGGTCAGCTCGTCGCCAACTTCGCCGCCAAGGGGCTCAGCGTCGAGGACATGGTGGTGCTCTCCGGCGCCCACACCATCGGCCTCTCACACTGCTCGTCCTTCGTCTCCGACCGCCTCGCCGTCGCCTCCGACATCGACCCGTCGTTCGCCGCTGTCCTACGAGCCCAATGCCCGGCGAGCCCAAGCTCGAGCAACGACCCGACGGTGGTGCAGGACGTGGTGACGCCCAACAAGCTGGACAACCAGTACTACAAGAACGTGCTCGCGCACAGGGCGCTCTTCACCTCCGACGCGTCGCTCCTGGCGTCGCCGGCGACGGCAAAGATGGTGGTGGACAACGCCAACATCCCCGGGTGGTGGGAGGACAGGTTCAAGACGGCCATGGTGAAGATGGCCGCCGTCGAGGTGAAGACCGGCAGCAACGGCGAAATCAGGAGACACTGCCGGGCTGTCAATTAA</cdnaseq>

Protein Sequence

<aaseq>MARLAALLVSLAMLMAAVTAARVERAGAGFYTPPSPSTCGLKIGYYHDKCPHAEAIVKGVVAAALHRDPGVGAGLIRMLFHDCFVEGCDASVLLDPTPANPQPEKLAPPNNPSLRGFEVIDAAKDAVEAACPGVVSCADIVAFAARDASFFLSDSRVSFDMPSGRLDGRYSNASRALDFLPPPTFNLGQLVANFAAKGLSVEDMVVLSGAHTIGLSHCSSFVSDRLAVASDIDPSFAAVLRAQCPASPSSSNDPTVVQDVVTPNKLDNQYYKNVLAHRALFTSDASLLASPATAKMVVDNANIPGWWEDRFKTAMVKMAAVEVKTGSNGEIRRHCRAVN</aaseq>

Gene Sequence

<dnaseqindica>1..258#375..1136#ATGGCTAGGCTGGCTGCTCTGCTCGTCTCCTTAGCGATGCTCATGGCGGCGGTGACGGCAGCCCGGGTAGAAAGAGCGGGCGCCGGCTTCTACACACCGCCAAGCCCTTCCACCTGCGGCCTCAAGATCGGCTACTACCACGACAAGTGCCCGCACGCCGAGGCCATCGTCAAGGGCGTCGTCGCCGCCGCCCTCCACCGCGACCCCGGCGTCGGCGCCGGCCTCATCCGCATGCTCTTCCACGACTGCTTCGTCGAGGTACGTACGTACGTACATTCATGTGTACGATATGATTGCTCGTTTCTGATCATCTTTGTGGCCGCGTGCATGACACTTGACACGTCTACATCGCCATTGCCGACATGTGGGTGCAGGGATGTGATGCCTCCGTGCTGCTCGACCCGACGCCGGCCAACCCGCAGCCGGAGAAGCTCGCCCCGCCAAACAACCCCAGCCTCCGCGGCTTCGAGGTCATCGACGCCGCCAAGGACGCCGTCGAGGCGGCGTGCCCGGGCGTCGTCTCCTGCGCCGACATCGTCGCCTTCGCCGCGCGCGACGCCTCCTTCTTCCTCAGCGACAGCAGGGTGTCCTTCGACATGCCGTCGGGACGCCTCGACGGGCGCTACTCCAACGCGTCGCGCGCCCTCGACTTCCTCCCGCCGCCGACCTTCAACCTCGGTCAGCTCGTCGCCAACTTCGCCGCCAAGGGGCTCAGCGTCGAGGACATGGTGGTGCTCTCCGGCGCCCACACCATCGGCCTCTCACACTGCTCGTCCTTCGTCTCCGACCGCCTCGCCGTCGCCTCCGACATCGACCCGTCGTTCGCCGCTGTCCTACGAGCCCAATGCCCGGCGAGCCCAAGCTCGAGCAACGACCCGACGGTGGTGCAGGACGTGGTGACGCCCAACAAGCTGGACAACCAGTACTACAAGAACGTGCTCGCGCACAGGGCGCTCTTCACCTCCGACGCGTCGCTCCTGGCGTCGCCGGCGACGGCAAAGATGGTGGTGGACAACGCCAACATCCCCGGGTGGTGGGAGGACAGGTTCAAGACGGCCATGGTGAAGATGGCCGCCGTCGAGGTGAAGACCGGCAGCAACGGCGAAATCAGGAGACACTGCCGGGCTGTCAATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012714