BGIOSGA012728

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Revision as of 09:51, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012728| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012728, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA012728

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012728, complete gene.

LocusTag

OSJNBB0097F01.8

Ensembl Transcript ID

BGIOSGA012728-TA

Ensembl Protein ID

BGIOSGA012728-PA

Length

3336

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:16451330..16454665

Sequence Coding Region

16451330..16451716,16451813..16452190,16452840..16453448,16453939..16454066,16454662..16454665

Genome Context

<gbrowseImage1> name=IndicaChromosome03:16451330..16454665 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:16451330..16454665 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGAGGAGGAGGAGGAGGAGGGCGCAAGCCACGCAACTTCGCCACGTTCAGGCTGTTCCCGCGCGCCGGCGCCGCCGACCCCAACGACCGCGTCTTCGTCCGCATCGACAGCAACGACTACACCGTCCCCGGCTTCGGCGACGACGACGCCTTCGACTCCTCATCCCTCTCCCTCACCGGTGACGCCGCCGCCGGCGATCGCTTCTCCTCCGCCTCCGGCCCCCTCCCCGACCACGTCCGCCGCGAGATCCTCGAGCTCGGCCTCCCGGACGACGGCTACAATTACCTCCACCACCTCCGCGAGCTCCGCCCCTCCGCCGCCGCCTCCGCCGCCTCATCCTTCGCGCCTAACCAGGCTGCCCCGCCTCTCCCCCTCGACGTGAAGGCGTATGATGCCAGTAGGGTGCGGATTGCTTCTGGCGATGTTGAGGATGAGATGGACGAGGGGAGGACGATGTGTAAGGTGGCCGCGAAGACAGCGCCTGTGAGGCGGATTGAGAGGGTGGTTGATCCTGACATCGCGAGGTTGCTCGACGAGACCGATGTCTCCCATGGCGGGTCGGAGGATGAGGGACTGGAGGAGGATTTTGTCATCATGGCAAACCGGGCTGAGGGGGATGAGGAGGAAGATGATGATGATGAAGAGGAGGAAGTGGTGGATGGTGTGTTCTTAAGTGATGTTGAAGAGGAAGAGGAGTTTGAGGATGATGAGGGTGAGCCCAAGCCGAGGGTCCGGCGGTTGCTGGATGAACAGTTTGATTTGCTTGCTTTGGAAGAATATGGTGACAGTGATGATGATGATGATGATCCAGGTGTTAGAAATGGGGAATGTGAACTGCCTACTGAGGTTATTGATGAACTGAAACTGTTCCATAGTCAAAATGTATCTGTCACAGAAGAATATAGAACGCCGGCAGATTTTGTTCGTAGAAAATTGGATTCAAGCACAGCAGAGGAGGTGGATGAATCTGCTAATGTAATCCAAAAATGTGCTGAATATGCTGAAAGGTATTTAAATGAAACTGCTGAAGAGGAAGAAGTTGTACTTGTTTCAGAAAGCAGTGATGAGTCTGAAGTTTGGGACTGTGAGACTATTGTTTCCACATACTCAAATCTTGACAACCATCCTGGAAAGATTCAAACACCAGGAAATCCTAAAAATAGGCTCCCTAAAGTTTTTCCTGGAGAAACAGCTACAACGAAAGATATCATCAGGCTTCAAGGCAAAGAGAGACTTCCAGTAGAATACCTACCACAGAGGAAAAGAAATGGTGAGAAGGAGAAGAAAGCAAAGCCAACAGAAACTCCAAGTGCTGAAAGTTTTAAGAAAGGAGCTCAAAAGGAAACAAAGGAGGAAAAGAAAGCAAGAAAGGCTGCAGTGAAAGAAGAGAAGAGAGAAGCACGGAAAGCAAAGAAAGAGCTGAAAGGCCTGTACAAATTTGAAACACAGAAGGCTCAGAAGGTTGCTGCTGTTACAGGGCCAGCTTCTATACGGCTAATGTAA</cdnaseq>

Protein Sequence

<aaseq>MGGGGGGGRKPRNFATFRLFPRAGAADPNDRVFVRIDSNDYTVPGFGDDDAFDSSSLSLTGDAAAGDRFSSASGPLPDHVRREILELGLPDDGYNYLHHLRELRPSAAASAASSFAPNQAAPPLPLDVKAYDASRVRIASGDVEDEMDEGRTMCKVAAKTAPVRRIERVVDPDIARLLDETDVSHGGSEDEGLEEDFVIMANRAEGDEEEDDDDEEEEVVDGVFLSDVEEEEEFEDDEGEPKPRVRRLLDEQFDLLALEEYGDSDDDDDDPGVRNGECELPTEVIDELKLFHSQNVSVTEEYRTPADFVRRKLDSSTAEEVDESANVIQKCAEYAERYLNETAEEEEVVLVSESSDESEVWDCETIVSTYSNLDNHPGKIQTPGNPKNRLPKVFPGETATTKDIIRLQGKERLPVEYLPQRKRNGEKEKKAKPTETPSAESFKKGAQKETKEEKKARKAAVKEEKREARKAKKELKGLYKFETQKAQKVAAVTGPASIRLM</aaseq>

Gene Sequence

<dnaseqindica>1..387#484..861#1511..2119#2610..2737#3333..3336#ATGGGAGGAGGAGGAGGAGGAGGGCGCAAGCCACGCAACTTCGCCACGTTCAGGCTGTTCCCGCGCGCCGGCGCCGCCGACCCCAACGACCGCGTCTTCGTCCGCATCGACAGCAACGACTACACCGTCCCCGGCTTCGGCGACGACGACGCCTTCGACTCCTCATCCCTCTCCCTCACCGGTGACGCCGCCGCCGGCGATCGCTTCTCCTCCGCCTCCGGCCCCCTCCCCGACCACGTCCGCCGCGAGATCCTCGAGCTCGGCCTCCCGGACGACGGCTACAATTACCTCCACCACCTCCGCGAGCTCCGCCCCTCCGCCGCCGCCTCCGCCGCCTCATCCTTCGCGCCTAACCAGGCTGCCCCGCCTCTCCCCCTCGACGTGAAGGTCCGCGACTTCCCTTCCCGAAACCCCAATTTTCGTTTCTCCTGCTATTCGGTTGTCTGATGCTTAGGATGATATGCTGTTGTTTTGGGCGTGCAGGCGTATGATGCCAGTAGGGTGCGGATTGCTTCTGGCGATGTTGAGGATGAGATGGACGAGGGGAGGACGATGTGTAAGGTGGCCGCGAAGACAGCGCCTGTGAGGCGGATTGAGAGGGTGGTTGATCCTGACATCGCGAGGTTGCTCGACGAGACCGATGTCTCCCATGGCGGGTCGGAGGATGAGGGACTGGAGGAGGATTTTGTCATCATGGCAAACCGGGCTGAGGGGGATGAGGAGGAAGATGATGATGATGAAGAGGAGGAAGTGGTGGATGGTGTGTTCTTAAGTGATGTTGAAGAGGAAGAGGAGTTTGAGGATGATGAGGGTGAGCCCAAGCCGAGGGTCCGGCGGTTGCTGGATGAACAGTTTGATTTGGTATGCTTCGTTTGCATTTTGTGTTTCCTTCAGTATGATTTCACATACACCATTTTTATAGGGGCAGTATAACTTTCCTTCCTTTTATTCTATAGGGGCATATTACGGGACTACCCTTATAGCTGCATAAGTTTCTAAGTATTTATGTGCTTGTCAAATATATTTTTATCATTGTGTAGATGGTAGATCTGAAGCTTCTAGATTGAAGATTACGCATAATGGATGACTGTGTTCATATATAATGCTGGTCATCAAACTAATTGAGCATACCATACCGGATGCTGTATCTTGTTCAACTCCCTCTAGTTGGAAGCGTATGTTGTTTTAGACATGCATCCAGTTGGCTTTCGAAACTTCGAATATCAATACACTATGTAGTATATTTGTCTCAAGAACTTTCTTGAATATTATACTTTTTACATGGTCTGATATACATAATGCACTAAAAGTTAGTGGTCAAACTACTGTTCTAGATAGTGTCCCATTGTCCAAAATTACATGTATTTTATGAATTGAGGGAATCATCACCAGACGCCTAATCAGTCATGTCTTTCTACGATTAGAAGTTCATCGTGCAAATTTGGACTCGTTTGTTTTGCGAATCGCAAATGGTATGCCCAATTCTGATTTGTTGTGAATCAACTTGCAGCTTGCTTTGGAAGAATATGGTGACAGTGATGATGATGATGATGATCCAGGTGTTAGAAATGGGGAATGTGAACTGCCTACTGAGGTTATTGATGAACTGAAACTGTTCCATAGTCAAAATGTATCTGTCACAGAAGAATATAGAACGCCGGCAGATTTTGTTCGTAGAAAATTGGATTCAAGCACAGCAGAGGAGGTGGATGAATCTGCTAATGTAATCCAAAAATGTGCTGAATATGCTGAAAGGTATTTAAATGAAACTGCTGAAGAGGAAGAAGTTGTACTTGTTTCAGAAAGCAGTGATGAGTCTGAAGTTTGGGACTGTGAGACTATTGTTTCCACATACTCAAATCTTGACAACCATCCTGGAAAGATTCAAACACCAGGAAATCCTAAAAATAGGCTCCCTAAAGTTTTTCCTGGAGAAACAGCTACAACGAAAGATATCATCAGGCTTCAAGGCAAAGAGAGACTTCCAGTAGAATACCTACCACAGAGGAAAAGAAATGGTGAGAAGGAGAAGAAAGCAAAGCCAACAGAAACTCCAAGTGCTGAAAGTTTTAAGAAAGGAGCTCAAAAGGAAACAAAGGAGGAAAAGAAAGCAAGAAAGGTAAAAGAGTGGTTTTAGGATATTCTTGCAATCATGTACTGTTATTCCTTAAAACAGTAGAGAATACCGGGAAAGCATTTTAATTGTGTTTATTTGATTCATTTGGAGGCTTCAACGGTTGACCAAATGTATGCTGCATTATACCTGCGACCTATGTAGTCATTTCATCATTTGTAGTATAAAAATCTTGAAGTACTAATCTTTAAGTTGTCTGTAGGTTCAAGTTTAGTTTAAACTTTTTTCAAGATAAACTAGCGTTAATTTATGGTACAACAGTTGCCTAGCTATTAGCGTATTTCTTGGTGGTTATGTTGAATTGATAAGTGTTCTTCAAGATTACAATGTGTTCCTAGCTGGAGCAGTGTTGTAAAATGATTTGTAAATCGGCTTAATATGGTGAACCACTTTTTTTTGTTTTAATAATTTTTAAATTGTTTATTGGTATGTGTAACATCCTTGTCATCTGGGCTGTTTCTTGGTATACATGTAGGCTGCAGTGAAAGAAGAGAAGAGAGAAGCACGGAAAGCAAAGAAAGAGCTGAAAGGCCTGTACAAATTTGAAACACAGAAGGCTCAGAAGGTTGCTGCTGTTACAGGGCCAGCTTCTATACGGCTAATGTAAGTCACCCTGTTGCCACGTTACACCATCTGAAATGAATGTGCCCAAAGGTTTTGACTTATTGCTGCTGGAAGAAATGAAAAAGAACTCCGCCACTGTTTGCTCCTTAGATAAAGAATTCAGCGGTAGTGTTACGTCAAGTGAAATGTAGATATACCCATCCTGGGTAGTACTATCTACTGCAGAATATGATCCAATTGCAAGTTTGCAACAACTTTGATTTGGGCATCGAAACAGCTAGAAAGAAATTCAGAACTCAGAACAGAAGATATTTGTGTAGACAGCTCACGAAGTGTTGTCACCTTTTAATCTTGAGTGAATTCTTCCCTTCCCATTTACTTGAATTTTATTTTGTCCTGTTTTTGCTGCCAACATCAAAAACAATTAAGGGAAGAGAATTAAGAACTATATAGTAGGCAGTTTCTTTGTTGTTTGATGTTGTAAAACCAATTTGGTTTCATGATTGCACCTAGCTCTGCTCTGCTTTGCGCTACACGTTCCTTCTTAGGTTTGATGTAAACACTTTTTAGTGGATTTATACAAATATTCTCTCTACTCTCTATACTGATTTGACTCTTTTTTTTACTTGATCAGGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012728