BGIOSGA012739

From RiceWiki
Revision as of 09:51, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012739| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012739, complete gene.| tag = OS03G03...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA012739

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012739, complete gene.

LocusTag

OS03G0376900

Ensembl Transcript ID

BGIOSGA012739-TA

Ensembl Protein ID

BGIOSGA012739-PA

Length

4472

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:16670437..16674908

Sequence Coding Region

16670437..16670631,16671549..16671758,16672477..16672539,16672621..16672694,16672792..16672887
,16673493..16673547,16673657..16673761,16673844..16673925,16674240..16674352
,16674507..16674908

Genome Context

<gbrowseImage1> name=IndicaChromosome03:16670437..16674908 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:16670437..16674908 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGTCGTCGGTCGGCGGCGGCGGCGGGCAGCAGTTCCGGTACACGCAGACGCCGTCCAAGGTGCTGCACCTGCGGAACCTGCCGTGGGAGTGCGCGGAGGAGGAGCTCGTCGAGCTCTGCAACCCCTTCGGCCGCATCGTCAACACCAAGTGCGGCGTCGGCGCCAACCGCAACCAGGCCTTCGTCGAGTTCACTGACATTAATCAAGCTATTTCGATGGTTTCTTACTTTGCATCATCTTCGGAACCAGCGCAAATCCGAGGCAAAACTGTTTACATTCAGTATTCAAACAGACAAGAAATAGTTAACAACAAGAGCCCTGGAGAGACTGCTGGAAATGTGTTGCTAGTTACTATAGAAGGTGTTCAAGCAAACGATGTCACCATCGATGTGATCCATCTGGTTTTCTCAGCTTTTGGATTTGTTCACAAAATAGCCACTTTTGAGAAGGCTGCAGGTTTTCAGGCACTGATTCAATACACAGATGCAGCCACAGCTTCTGCAGCAAGAGAAGCCTTGGATGGAAGAAGCATCCCAAGGTACTTGCTTCCAGAGCATGTAACATCTTGTTGTTTGCGTATTTCGTTCTCTGCGCATAAGGATCTGAATATCAAGTTCCAGTCACATCGCAGCAGGGATTACACCAACCCTTACCTTCCGGTTAATTCATCTGCTATAGATACGTTACAGCCTGCTGTTGGTGCCGATGGAAGGAAAGTGGAAGCTGAAGGCAATGTTCTTCTCGCATCAATTGAAAATATGCAATATGCAGTCACGGTGGATGTTCTCCATACTGTGTTCTCTGCATTTGGTACAGTCCAGAAAATAGCTATTTTTGAGAAGAACGGTGGAACACAAGCTTTGATTCAGTACCCTGATGTAACTACAGCTTCAGTTGCGAAGGAAGCATTGGAAGGGCATTGCATCTACGATGGTGGCTACTGTAAGCTCCACCTGTCATATTCTCGTCATACTGATCTCAATGTAAAGGCACACAGTGACAAGAGCAGGGATTACACAATCCCTCAAGGTGCGATGCAAGCAGTACCACAACCGCCTGGTGTACCAACAACATCTGCTGGGTGGCAAGGTAATCCACAAGCCGGTGGTGCATATGCACCACCTGGAGCTGCTGCTCCAAACCACGGCACAACAGGGCAAGTGCCAAATTGGAATCCCGGGAACTCTGGGTATGCTCCAGCTCCAGGAGCATATCCAGGTCAAATGTACTCGTCACCAATGCAGTATGGCGCATCAGGGGGCTTCTCTGCTCCTGCTGCCCCACCACAAGAGTTGCATACTTCGCAGCAGATGCCGCCGCCTCAATATGGAAATCAGCCTGGACCAGCAGGTGCACCAGGAACCGGGCAACCACATCCATATTATCGCTAA</cdnaseq>

Protein Sequence

<aaseq>MSSSVGGGGGQQFRYTQTPSKVLHLRNLPWECAEEELVELCNPFGRIVNTKCGVGANRNQAFVEFTDINQAISMVSYFASSSEPAQIRGKTVYIQYSNRQEIVNNKSPGETAGNVLLVTIEGVQANDVTIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAATASAAREALDGRSIPRYLLPEHVTSCCLRISFSAHKDLNIKFQSHRSRDYTNPYLPVNSSAIDTLQPAVGADGRKVEAEGNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGGTQALIQYPDVTTASVAKEALEGHCIYDGGYCKLHLSYSRHTDLNVKAHSDKSRDYTIPQGAMQAVPQPPGVPTTSAGWQGNPQAGGAYAPPGAAAPNHGTTGQVPNWNPGNSGYAPAPGAYPGQMYSSPMQYGASGGFSAPAAPPQELHTSQQMPPPQYGNQPGPAGAPGTGQPHPYYR</aaseq>

Gene Sequence

<dnaseqindica>1..195#1113..1322#2041..2103#2185..2258#2356..2451#3057..3111#3221..3325#3408..3489#3804..3916#4071..4472#ATGTCGTCGTCGGTCGGCGGCGGCGGCGGGCAGCAGTTCCGGTACACGCAGACGCCGTCCAAGGTGCTGCACCTGCGGAACCTGCCGTGGGAGTGCGCGGAGGAGGAGCTCGTCGAGCTCTGCAACCCCTTCGGCCGCATCGTCAACACCAAGTGCGGCGTCGGCGCCAACCGCAACCAGGCCTTCGTCGAGTTCGTAAGCCCTCCCCCCCGTTCTCCCTCCCCTTCCCCACCCGCCTGGCCCGCCTCCATCTCCCCCCTCTCGTCGCTCGATCTCATTCGAGATCCGTTCGGATGAATCGGCCACCGGATGATCTGCCATGTTCAATCCACGATCTATCGATTCGGCCGTATAGGTATAGCGCAGTCCTGTAATTAGGGGATTTTGTCTCGGATAGTATAGCGCAGTCCGTAATTAGGGGACAGTGGGGGTCACTGGCTCACATGCCGTCCTCACATCTGCTTGGTTTTAGCTTTTTTTTTTTTTTGCTATGCCAACACATCGCGAAGATGGAATTGATATGAGCTTCGGTCATCGTAAAGGATTTGTTAAGATGCGGCTGCGGGATACACGCGGGACTGGATATTCGATACTAGTAGTAAAGTTGTTTAACAATGTTAGTATTTTGGATGGGTTTTCAGGTGGATTGTTGGGTTTGTGATTGGAGTTGACCGAGGTTAGTTTATGATACTGGAATGCTATATGTTGTATCAATCTGTCTGTCAGGAATCGATCTGTAGCATACTCGGTAACCGCTATCTATATGGATGGCTGGGCCTATGTGGTTTTGTGGTTTTAAAAGTTCCACATGTCACTGTTTGGTTTGTGATAGGATACAGTTACAGGGATGTGATTTGTGGCTCTTGGATATATGGTGGCGGGAGCTGGGAGCTTTGAAATGACAGCAAAGCTGTATTCTGTGTCATTAGTAACTTTAGAGTATGATTCTATTTGTGAGATTGATTATCTAATAAAATGTGGTGTATCTTTAGACTTCTAGGAAAGGCTTTCAGAAACTTTATCTTCCTACAAATTCTATTATTGTTTATACTTATGTTTTATTTGTAATAAATGCTGCGCATTACTTATGCAAAGCCATTCCTTCTTTGCAGACTGACATTAATCAAGCTATTTCGATGGTTTCTTACTTTGCATCATCTTCGGAACCAGCGCAAATCCGAGGCAAAACTGTTTACATTCAGTATTCAAACAGACAAGAAATAGTTAACAACAAGAGCCCTGGAGAGACTGCTGGAAATGTGTTGCTAGTTACTATAGAAGGTGTTCAAGCAAACGATGTCACCATCGATGTGATCCATCTGGTGAGTTCTAAATTTTAGTTTCTTTTCCAACATGAAAGTATTTCAATGGGTGAATTAGTAAGATCATGAAAAATTTAAGTGTGACTGTTGCTATATCGGTTGCCATTGACTGAAGGGATCCAAGGGAGTCTACCTGACCTGATCCTTGTAAATCAAAGATTTTACATAGCTCTTCATCTCGTAGTAACGTATTCTGCATGAATCAGCAGGCCCATGTTAACACGGAGAAAATGTCGTTATCAACATCTGCAATTGGAGAGATATCATGTTTGTTTTGCTGCCTCTGTCTTCTAACTATTACATCTGAAGTTTTTATGAACTCTTGGGGATGCCATTTTCTAATTATCTTTCATCATCACGCTTTTCCACGGTGTAGGGCACCTCCCTGTTTATCCAAGTTATTGATGAAAGGTTAAATTCCCAACCTTTAGAAAATTAGTACATCTATGGTGCTTCTTTTGTGATCATTTTGTGGTTCTTTTATCCATCTATTAGCAATACAATATAGTTCCATTTGTCCCTGGTTCATCTGTCTAAGATCTTCTGTCCTCTTTGTCTTTTTGGTGGACAAAAGGATAACCTTTAAGAGTTTCCTGCCAGATAGAATATTTAATAATTGATTTTATGTACTACAACTACAAGATTTTTATATGTGCTGCCAGTTCCTGGATTAATTTTCTCTTTTACTCCTATATATGACCCTTCTATTATATTTCAGGTTTTCTCAGCTTTTGGATTTGTTCACAAAATAGCCACTTTTGAGAAGGCTGCAGGTTTTCAGGTTACTTGAAATTTCAAATTCTGTTAATATACTTGATTGTTTACAAAGGCGATCTTCCCACCTTATTTTCTTCCCCCGCAGGCACTGATTCAATACACAGATGCAGCCACAGCTTCTGCAGCAAGAGAAGCCTTGGATGGAAGAAGCATCCCAAGGTGACATCTTTGTTCTCTGTACATTGCATCTTTTAATATTGTTCACACTTTGCTCCTCCTATAAACTGAATTCCTCTGAGACTTTAATTTAATGTAGGTACTTGCTTCCAGAGCATGTAACATCTTGTTGTTTGCGTATTTCGTTCTCTGCGCATAAGGATCTGAATATCAAGTTCCAGTCACATCGCAGCAGGTATCACTTATATCTTTTTTGCCTTGAGTTAATTTACAAAGATCAAATTTCGCGGTTGTTAAGATGGATCTCTATATGTCTAGGAGGATTGTAATATCAACATACTACCTGGTACCATATTTTAATGTCTACATTAAGATTTATGCCTAGGCATTGCAAGATCATACCTCATATTTTCCCTGCAAATTCAGAAATACGTGTTCTGCCACATCATGGGCATTTTACCTTTATTCATCTTTCCTGTTCATCCTGCTGCCTCCTTATATACTGACACATGATTACTTTGAAAACCTGGTAAAATAGACTATCAACCACTGGATTCCAGATTTGAATTTGCAACCTAATTGTTGGCTAAAACAAAGTAGCTTTTTTCATGGGTTAAGGGCATATTCATCCATAGTAGCACTTGGCTTCCATTTTTTTAGCCTCTTGCTTTTTGTATGGAACTTCCATATTTGTATGAGTATATTACTGCAAAATCTTTATTTGTCAGTGGATTCGTCTTCTCCATCTTTGTTCCTTATCTTATTTGCCTTGTGTTATTATAGATCAAAATGCTTCTTACTATGTATCTTGTTAAACATGTTTTCTTTTTTATTTTGCAGGGATTACACCAACCCTTACCTTCCGGTTAATTCATCTGCTATAGATACGTTACAGGTACTACTATTGGATATCACCAACATTTGAATAATTTAATTGTCTTTTTTTTTTTCCATTTATATGAACCTGCCTTTCATATAAACTGCCTTTTGATGTTCCTTCACAGCCTGCTGTTGGTGCCGATGGAAGGAAAGTGGAAGCTGAAGGCAATGTTCTTCTCGCATCAATTGAAAATATGCAATATGCAGTCACGGTGGATGTTCTCCATACTGTAAGTTAAATTGGAAAGCACTTATTCAAAGATTTTGTTGTTTTGTAGTTACTTCATGCTGACTAAGATTAATCAATTCCAGGTGTTCTCTGCATTTGGTACAGTCCAGAAAATAGCTATTTTTGAGAAGAACGGTGGAACACAAGCTTTGATTCAGTACCCTGGTATGAACCTTGGAACATATCATCTTAGTAGAATTACAGAATAATTATGTTTTGTGTTGAATTAGTGCTTTCATTTTCAACATTTGACCTAGCAGACCACACCTCCAACAAAGCTTGATATTGTTATTTCGTTTACAGAAATTATTTTCCTATTTTTGTAATTGAAGTGAATGTGTAGAAGTTGTGCAGAACTAACCAATGTAAACATGCTTTCCTTTACATCGTAACAAACATGTGCTTGTTCTGTTTATGATTTCATGTGCTTTAAATTCAGACATTTTTTCATGATCTGACCTCATTACATTACCATTCAGATGTAACTACAGCTTCAGTTGCGAAGGAAGCATTGGAAGGGCATTGCATCTACGATGGTGGCTACTGTAAGCTCCACCTGTCATATTCTCGTCATACTGATCTCAATGTAAAGGTATAATAGGTGTGCATTTTCTTTAGTGTATTATGGGCATGAAACCTGTTTAGACGATATGATTTACTGCCATCATAGAACCCTTCATCTTGTATTCAAGCAGAGACTTTCCTATCATATGAATTATGAACCATGTATCTGTCTGTTCTTTCAGGCACACAGTGACAAGAGCAGGGATTACACAATCCCTCAAGGTGCGATGCAAGCAGTACCACAACCGCCTGGTGTACCAACAACATCTGCTGGGTGGCAAGGTAATCCACAAGCCGGTGGTGCATATGCACCACCTGGAGCTGCTGCTCCAAACCACGGCACAACAGGGCAAGTGCCAAATTGGAATCCCGGGAACTCTGGGTATGCTCCAGCTCCAGGAGCATATCCAGGTCAAATGTACTCGTCACCAATGCAGTATGGCGCATCAGGGGGCTTCTCTGCTCCTGCTGCCCCACCACAAGAGTTGCATACTTCGCAGCAGATGCCGCCGCCTCAATATGGAAATCAGCCTGGACCAGCAGGTGCACCAGGAACCGGGCAACCACATCCATATTATCGCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012739