BGIOSGA012754

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Revision as of 09:51, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012754| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012754, complete gene.| tag = OsI_118...")
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Gene Name

BGIOSGA012754

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012754, complete gene.

LocusTag

OsI_11815

Ensembl Transcript ID

BGIOSGA012754-TA

Ensembl Protein ID

BGIOSGA012754-PA

Length

2913

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:16830094..16833006

Sequence Coding Region

16830094..16830209,16830756..16830969,16831024..16833006

Genome Context

<gbrowseImage1> name=IndicaChromosome03:16830094..16833006 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:16830094..16833006 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGGCTCTGGACATGCTGCAGTGCAGCCTGATGAAGATGATCACCAGCGCGGGCGCTGGTGACCTGTTCGACGCGTTGTCTTCCGCGCCCGCGCCCACCCGCATGACAAGGAGGGATGATTTACAACAAGGAAATTTGACATTATATGAAGAGCACCAAGAGGAACTTGAGAAAGCCCTTACTCCAACAGATCAAGAACTACAGAAAAATGATAATCGTCCAATTGTGGTCTCTGTATCTGGAAAGAGTGGGGTTGGCAAGACAACTCTTGTGAGAAATGTGTACAATATAATGAAGAAGAAGAATTGTTTTGATGTTCATGCTATGCAGCTTACAGAAGACAACAAGAATTGTCCTAGAAGCATGGTCCATGAAATGTTGGCTACAGCGTTGAGAGATAAGAAATACTTACTGGTGATAGATGGTGAAGTTAGCAGAACTGAATGGAAGAACATTATCACTATGCTCACTACCCTTGCAGTTGGTTCTACTGGTAATAGAATAGTGCATATCAGATTTGACAGACCAGAACAGTCGTCTCTCTATTATCATCATCACATTCGGTTAGAACCTCTTGAAAATAATGTTGTCATGAAATTGTTCCACAAGCGATTACGAAACCAAGACAAGCAAGGTGATGCCGGAGGTCCAATGGTATTGAAGTTGAAGAAACTACTCCAATTTGATGCACAATATCAAAAACTTGAAGAATACCGTGAAGACATATGCAAAATCACGGAAGGGTTGCCTCTGGCTGTTGTTCTTTTATCAGGTCTTGTCCAAACCAAAGAGTTTCCCCATGAGTGGACAGAAGTATTCAAGTATCTTAGTTCCAAGAAATCAAAGCGGCTCGACAATCTACTGTCCCTGTGTTTTGATGATCTTCCACACGAACTGAAATGTTGCTATCTATACTTTGCTGCATTTCCTCAAAATGTAGTGGTCGAGGCACGCAACTTGGTGTGTATGTGGATGGCAGAGGGATTTCTAACACCTAGAGTTGGAAAGACATTGGAGAAGGTGGGCTACATCTTCCTGAATGAGCTGATTTCCAGGAATCTAGTCAATCTTGTTCTTGTAGATGATAATTCTACTACCGGGACTATGTTCATCTCCATCCAAAACAAAGTACATGAGTTTTTGCAATCTGAAGCGCATGAGGCAAGTTTCTTGGAGGTGCATAGTGGTGATGACATCCCTACTTTGACAAGTGCTCGTCGCCTCTCTCTACAGAATTACACAGACAAGTATGCGGCCCTAGCTAATCCATTGCCAAAGCTACGATCCATCTTCTCTCAGTTTGAGCAAGAGCCAAAGGAACAAGAGCCCAAAGGAGACCAAACTAGACAATGTTGCACACCACCTCAACAGTGGGTAACCAACAAGAAGCAGAAAAACATCAGATCTCACATAAAAGGATTGCTACAAGGATCAGAGTTCCTCCGTGTCATTGACCTACAAGGGATTGAGATTGGTGATGAGTTGCCACATGCAATAGGTAGTGTTGTGCATCTGCAGTACCTTGGAATTACATCTTGTTCATTGACAGTGATCCCTCCATCCATTGGAAGCCTGAGTGGTCTACAGACATTGGATGTCAGAGAAACTAATGTTCGGAAGCTCCCACTGAACTTTTGGTTGATGATCAAGACACTAAGGCATGTATTTGGTTTTACCCTCAAATTGCCTAAACAAATTGGCAGCATGAAGCATATGCAGACACTTGACTCAATAGAGCTTGACAACTGTGAGAAGGATTTGATTGGGACAGTTGGAAAGATGGTCCATCTAGAAAATTTATTTGTTTGGAACATTACAACTGGTAATATGGAGGCTTTGTTTGCTGCTCTGAGCAAGCTAGAGAATCTTAGGAATTTGGCCTTGCATGGCCACATTATTCCATCAACCGTGTTCATCACAATCTCGCTTCGCCGCCTCAAGTCCATGAAGTTACAAGGGAAACTAAAATTTTTATATGAGATAACTGGTATGGATGTATGCCTTCCTAATCTCAGCATGCTTTCATTGGAGAAAACAAAGGTATCTCAGGGATTCATTTCAAAGCTTGCTGAACTCCCATCTCTTGAAACCCTTGCCTTATATTCTGAGTCATACAAGGACGAGCATCTTTTATTCTCTTCAATTGGATTTGTTAGTCTGAAGAAGATCAAGCTTGATGTACCAACAACGCTGAAAACTATTGAGATAGAGCAAGGTGCGCTTCATATTCTCAAGGAATTTGATATTCTCTCTCAACGTCCCCATGTCAAAATCATTGCGGAAAGACGCATCAAAAAGCTCATTGTCTAA</cdnaseq>

Protein Sequence

<aaseq>MSALDMLQCSLMKMITSAGAGDLFDALSSAPAPTRMTRRDDLQQGNLTLYEEHQEELEKALTPTDQELQKNDNRPIVVSVSGKSGVGKTTLVRNVYNIMKKKNCFDVHAMQLTEDNKNCPRSMVHEMLATALRDKKYLLVIDGEVSRTEWKNIITMLTTLAVGSTGNRIVHIRFDRPEQSSLYYHHHIRLEPLENNVVMKLFHKRLRNQDKQGDAGGPMVLKLKKLLQFDAQYQKLEEYREDICKITEGLPLAVVLLSGLVQTKEFPHEWTEVFKYLSSKKSKRLDNLLSLCFDDLPHELKCCYLYFAAFPQNVVVEARNLVCMWMAEGFLTPRVGKTLEKVGYIFLNELISRNLVNLVLVDDNSTTGTMFISIQNKVHEFLQSEAHEASFLEVHSGDDIPTLTSARRLSLQNYTDKYAALANPLPKLRSIFSQFEQEPKEQEPKGDQTRQCCTPPQQWVTNKKQKNIRSHIKGLLQGSEFLRVIDLQGIEIGDELPHAIGSVVHLQYLGITSCSLTVIPPSIGSLSGLQTLDVRETNVRKLPLNFWLMIKTLRHVFGFTLKLPKQIGSMKHMQTLDSIELDNCEKDLIGTVGKMVHLENLFVWNITTGNMEALFAALSKLENLRNLALHGHIIPSTVFITISLRRLKSMKLQGKLKFLYEITGMDVCLPNLSMLSLEKTKVSQGFISKLAELPSLETLALYSESYKDEHLLFSSIGFVSLKKIKLDVPTTLKTIEIEQGALHILKEFDILSQRPHVKIIAERRIKKLIV</aaseq>

Gene Sequence

<dnaseqindica>1..116#663..876#931..2913#ATGTCGGCTCTGGACATGCTGCAGTGCAGCCTGATGAAGATGATCACCAGCGCGGGCGCTGGTGACCTGTTCGACGCGTTGTCTTCCGCGCCCGCGCCCACCCGCATGACAAGGAGGTCGGCGACGACGAAACTGATGAGGTGATGATGACGAAGACATTGATGGTGATGTCATGCATCGAGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTATGATGAACCGTGTGGATATTAGGTACAAAGTAGAAAAGCTCTCAAACTAATCAGAAATAGATAGACTTAAATTTACCTTTTAAATTTACTAGAAAAAGTTTGTTTTTTGAAATTACTAGCATGCACCTACTAGCTGCTTCATGACTAGCATTGCATAAATGCTAGTGGTTAAGATAAAAATTATACTGAAATACGAAAAAAATACATGTACATAAAGTGCATGCCTCATCAGTAATCTCTTCTCCTTCATAAAGTTACGTAAACGGGTTTTGGGCTTATATATGTACACAAGATTCTGAATTACCAATATTTGGGGAAAAGGCAGCTAGATGGTTCAAACTTGATACTGATTCTCAATACACTGCACTTTGGCATTATGCAAATTTACTCTTTAATGTACTAACTGTATAATGTTTTAACTACAGGGATGATTTACAACAAGGAAATTTGACATTATATGAAGAGCACCAAGAGGAACTTGAGAAAGCCCTTACTCCAACAGATCAAGAACTACAGAAAAATGATAATCGTCCAATTGTGGTCTCTGTATCTGGAAAGAGTGGGGTTGGCAAGACAACTCTTGTGAGAAATGTGTACAATATAATGAAGAAGAAGAATTGTTTTGATGTTCATGCTATGGTGAGTTTTGCACCTCATTTAACAGCCCACAACATCCTACATCAAATTGTTCAGCAGCTTACAGAAGACAACAAGAATTGTCCTAGAAGCATGGTCCATGAAATGTTGGCTACAGCGTTGAGAGATAAGAAATACTTACTGGTGATAGATGGTGAAGTTAGCAGAACTGAATGGAAGAACATTATCACTATGCTCACTACCCTTGCAGTTGGTTCTACTGGTAATAGAATAGTGCATATCAGATTTGACAGACCAGAACAGTCGTCTCTCTATTATCATCATCACATTCGGTTAGAACCTCTTGAAAATAATGTTGTCATGAAATTGTTCCACAAGCGATTACGAAACCAAGACAAGCAAGGTGATGCCGGAGGTCCAATGGTATTGAAGTTGAAGAAACTACTCCAATTTGATGCACAATATCAAAAACTTGAAGAATACCGTGAAGACATATGCAAAATCACGGAAGGGTTGCCTCTGGCTGTTGTTCTTTTATCAGGTCTTGTCCAAACCAAAGAGTTTCCCCATGAGTGGACAGAAGTATTCAAGTATCTTAGTTCCAAGAAATCAAAGCGGCTCGACAATCTACTGTCCCTGTGTTTTGATGATCTTCCACACGAACTGAAATGTTGCTATCTATACTTTGCTGCATTTCCTCAAAATGTAGTGGTCGAGGCACGCAACTTGGTGTGTATGTGGATGGCAGAGGGATTTCTAACACCTAGAGTTGGAAAGACATTGGAGAAGGTGGGCTACATCTTCCTGAATGAGCTGATTTCCAGGAATCTAGTCAATCTTGTTCTTGTAGATGATAATTCTACTACCGGGACTATGTTCATCTCCATCCAAAACAAAGTACATGAGTTTTTGCAATCTGAAGCGCATGAGGCAAGTTTCTTGGAGGTGCATAGTGGTGATGACATCCCTACTTTGACAAGTGCTCGTCGCCTCTCTCTACAGAATTACACAGACAAGTATGCGGCCCTAGCTAATCCATTGCCAAAGCTACGATCCATCTTCTCTCAGTTTGAGCAAGAGCCAAAGGAACAAGAGCCCAAAGGAGACCAAACTAGACAATGTTGCACACCACCTCAACAGTGGGTAACCAACAAGAAGCAGAAAAACATCAGATCTCACATAAAAGGATTGCTACAAGGATCAGAGTTCCTCCGTGTCATTGACCTACAAGGGATTGAGATTGGTGATGAGTTGCCACATGCAATAGGTAGTGTTGTGCATCTGCAGTACCTTGGAATTACATCTTGTTCATTGACAGTGATCCCTCCATCCATTGGAAGCCTGAGTGGTCTACAGACATTGGATGTCAGAGAAACTAATGTTCGGAAGCTCCCACTGAACTTTTGGTTGATGATCAAGACACTAAGGCATGTATTTGGTTTTACCCTCAAATTGCCTAAACAAATTGGCAGCATGAAGCATATGCAGACACTTGACTCAATAGAGCTTGACAACTGTGAGAAGGATTTGATTGGGACAGTTGGAAAGATGGTCCATCTAGAAAATTTATTTGTTTGGAACATTACAACTGGTAATATGGAGGCTTTGTTTGCTGCTCTGAGCAAGCTAGAGAATCTTAGGAATTTGGCCTTGCATGGCCACATTATTCCATCAACCGTGTTCATCACAATCTCGCTTCGCCGCCTCAAGTCCATGAAGTTACAAGGGAAACTAAAATTTTTATATGAGATAACTGGTATGGATGTATGCCTTCCTAATCTCAGCATGCTTTCATTGGAGAAAACAAAGGTATCTCAGGGATTCATTTCAAAGCTTGCTGAACTCCCATCTCTTGAAACCCTTGCCTTATATTCTGAGTCATACAAGGACGAGCATCTTTTATTCTCTTCAATTGGATTTGTTAGTCTGAAGAAGATCAAGCTTGATGTACCAACAACGCTGAAAACTATTGAGATAGAGCAAGGTGCGCTTCATATTCTCAAGGAATTTGATATTCTCTCTCAACGTCCCCATGTCAAAATCATTGCGGAAAGACGCATCAAAAAGCTCATTGTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012754

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA012754&oldid=57577"