BGIOSGA012760

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Revision as of 09:52, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012760| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012760, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA012760

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012760, complete gene.

LocusTag

OSJNBA0011H24.20

Ensembl Transcript ID

BGIOSGA012760-TA

Ensembl Protein ID

BGIOSGA012760-PA

Length

5780

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:16879760..16885539

Sequence Coding Region

16879760..16879840,16879965..16880030,16880737..16880820,16881202..16881281,16881720..16881765
,16881863..16881973,16882631..16882697,16883022..16883037,16883278..16883338
,16883422..16883552,16883650..16883767,16884460..16884583,16884924..16885025
,16885124..16885192,16885484..16885539

Genome Context

<gbrowseImage1> name=IndicaChromosome03:16879760..16885539 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:16879760..16885539 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGGCGGCGGGAGGCGATGGTGAGGCGGCGGTGATGCGGGCGGAGGTCGCCGCGCTCCGGCTCCGCGTACAGGAGTTGGAGAGGGAGAACCAGAGGCTGGGTAAGATTGCTTCGAGATGCACCTGCGGCAGCTCCAAGGACGACAGCGCTGCTTCCTCTCCAGTAGTTAGTGAAAGTTTGTCCAGCAGTAAACAAGAACCACAGAAGAACGTAAAGTCACATTGTAGAGGTTGCCAAGTGGGGGTTGTAAGTCACTGCCCAAAGCGATTAATTGCTCTGAAAATCATGTACTTTGGTCAGAGATTTTATGGCTTTGCTTCAGAAGCCCACACAGAGCCTACAGTTGAGTCTGAGATATTTAAAGCACTTGAAAGGGCGAAGCTTCTGGTTGGAAGTAGGAAAGAATCATGTTATTCTAGGTGTGGAAGAACTGATAAGGGGGTTTCTGCTACTGGACAGGTAATTTCCTTATTTCTGCGATCCAACATAAAAGATGCCAAATTGGATGTACTAGACAACAAATCTGGAGATTTTCTTGCAAGATTCTCTTGTTTGGGCAGGGAATATAAGTACCTGTTTTGGAAGGGCGACTTGAATATATCGGAAATGCAGAAGGCTGCATTAAAATTCATTGGCGAACATGACTACAGGAATTTCTGTAAGATGGATGCAGCAAACGTGAGTAACTACAGGCGACATATTACAGATTTTAATATTTCAGCCTATGACCAAAGGTCTAACTATGATGAGCTGTGGGCCATCACAATCAAGGGGAGTGCCTTCCTGTGGCATCAAGTTCGCTGCATGGTAGCTGTGCTATTTCTCATTGGTCAAGGTCTTGAGTCACCATGTATAGTTGATTCATTATTGGATATTACCAAAACTCCTAGAAAACCTCAATACAAGATGGCATCAGAGATTCCATTGATTCTGCGATCCTGTCTGTTTGATGAGGTCAACTTTATGTGTTCATCAGAGGCCAGTCAAGCTTTGATTGAGCACTTGAAAGATGAATATCATCAGTATATGCTCCAGGCTGCAATATTTTGTGAGGCATTGTCCTGTTTATGTTCTCCAGAGCCTGATCCATTTGAACCTCGTCACAAGAAGAGGAATCATATTCCTCTAATGTCACGACAAACAGAACCTTCGTATGAGGAACGGATAGCAAAGGTCAAAACAAAGTCAGCTGGTAGTGTGTAG</cdnaseq>

Protein Sequence

<aaseq>MAAAAAGGDGEAAVMRAEVAALRLRVQELERENQRLGKIASRCTCGSSKDDSAASSPVVSESLSSSKQEPQKNVKSHCRGCQVGVVSHCPKRLIALKIMYFGQRFYGFASEAHTEPTVESEIFKALERAKLLVGSRKESCYSRCGRTDKGVSATGQVISLFLRSNIKDAKLDVLDNKSGDFLARFSCLGREYKYLFWKGDLNISEMQKAALKFIGEHDYRNFCKMDAANVSNYRRHITDFNISAYDQRSNYDELWAITIKGSAFLWHQVRCMVAVLFLIGQGLESPCIVDSLLDITKTPRKPQYKMASEIPLILRSCLFDEVNFMCSSEASQALIEHLKDEYHQYMLQAAIFCEALSCLCSPEPDPFEPRHKKRNHIPLMSRQTEPSYEERIAKVKTKSAGSV</aaseq>

Gene Sequence

<dnaseqindica>1..81#206..271#978..1061#1443..1522#1961..2006#2104..2214#2872..2938#3263..3278#3519..3579#3663..3793#3891..4008#4701..4824#5165..5266#5365..5433#5725..5780#ATGGCGGCGGCGGCGGCGGGAGGCGATGGTGAGGCGGCGGTGATGCGGGCGGAGGTCGCCGCGCTCCGGCTCCGCGTACAGGTTCGCGGACCAGCGTTCGTTTTTTCCTTTTTCTCTTCTTGCGCGGCTGTTTCGGTGGATTTAGTGAAGTTGTTTCTTCTCTTTTTTTTTTCTCTACTGGTGAATTATAATTGGGTGTGATTAGGAGTTGGAGAGGGAGAACCAGAGGCTGGGTAAGATTGCTTCGAGATGCACCTGCGGCAGCTCCAAGGTGAGATTTCTTTTATCCTTAGTACTGCCATTTTCATTCATCTAATCGGAGCCATTTCGAGCTGTCCTGAATGGTGATTGATAGTTTGACGATTCCATCTAGTCGTTGGTGCACCATTGCTTCCAAAAAAACTAGCTTGTTCTTTGTAGTTTAGTACATATATAGTGAGGTAACCTTGTAATAAGAGAGGATAACGGTAGCTAGAAATCCTTGTCCGGAGAACTGCACATTTTCGAGGTGAACTCATGCAAGAGTATTGCCTGTAATTCTTTTTTATCCTAACACATCGATTTTCTGGTCACGAAAAGATGATAGAATAGTAATGCTTTGGTTGCTGTCATGGATTGGATGGATCACACTTACTACCAGAAAGTTCCCTTTTCTATCTTCCCACTAGGATTATATTCCTGATTGTTCAAATACATGCTGAAGTTTGGTTTGAAATAAAATTTGATAAATCTAGATTACAGTACCCCAAAAGTGTCACTCAGCAAGTTTTATGGCATTAGTCAAGCATGACCCCACCATATGCTAACAAAAACCTGCATCTGTGGCTATACCTTTATAGCTAGATATCTTGGAGTTTTGATGATGTTATCATGTTGATATCATTTCTAGAAGAATGCTTATGTACTGCATCCCTCACCTGTAATCATTTGTCATGAGGTTCTTCTCTGTTAACATTTTTCCTGATTTTCTTCTGTAGGACGACAGCGCTGCTTCCTCTCCAGTAGTTAGTGAAAGTTTGTCCAGCAGTAAACAAGAACCACAGAAGAACGTAAAGTCACATGTAAGTGTAACTTCAGACCATAATGTCATATTTTAATTTGATCAGATGGTTCCACAATAACATCTACCATAATCACATAATGGAGTTTTGCTTTCTTATCTTATCTGAGTCATATGCATACAATCGAATTATAGTGCAATGGTATTTTGGAATACAATAGTTCATGCACATATGCAACTTAAGATACACTAAGTTTCTATAGGTAAGGATAGTCATTTGTTTACTAGAAGGAACTCTGTTTGTTGTCATTTTTGCATGTAAATATATTAGATGTGTATGTCTCCATTGAGATTAATGGAGCATATTTTTCACCTATACTAAAACATTAATTTTCTAAGAAAACTTCTGTCTAATATTACCTGTTTTTTTTCTTGTGTTTAGTGTAGAGGTTGCCAAGTGGGGGTTGTAAGTCACTGCCCAAAGCGATTAATTGCTCTGAAAATCATGTACTTTGGTCAGAGGTATGATTTTATTTCCAATACAAAAATCATGTGTTTCCTTCATCTGTGATGCTTTCTTGCTTAAACTCTGATACAATCCCAATATTGTGCTAGCTTCTATGTGATGAAGATAAGAAGATTGCATTAAAATCCTGCTACTATGTGATCAAATATAGGCGTACTATATGTGTATATGCAACAGCTTTAAGTTAGGAACCTCTTCACTGGTCACAGATCAAACTTTGAGTCAATAATATTAACACATGTTTCTTCTGCAAAATTGCAATATGTTCTCCTGGCACCTGCAAAATTGAGTCAATAATATCAAACTTTCCAATCCAAGAACTTCTGCTGGCACCTGCATCCGTTCTCTTTACTTTGTTAGTTCTCATTGCTCGTGGCCTCGTGCCTTGTCTCTTTTCTCATTTTTTTTCTGCAAATATGCTTGTTCTCATGCAGATTTTATGGCTTTGCTTCAGAAGCCCACACAGAGCCTACAGTTGAGGTATATTTTTTTTCCTACGAACTACATATCAGCTTATTTTTGTTTCTCTAAGGGCGTCTAAGGTTTTCCATTAATACTCCTACCTTTTCTGTTCCAGTCTGAGATATTTAAAGCACTTGAAAGGGCGAAGCTTCTGGTTGGAAGTAGGAAAGAATCATGTTATTCTAGGTGTGGAAGAACTGATAAGGGGGTTTCTGCTACTGGACAGGTACTTGAATGTGTATGGTTTGTTCAATGCTAGATGATTATATTATGTTTTCTTCTTGTATATAATATAAGCTTATATTACTCATAGTAGTCTCAGATGTGATCACGAATTATTTTTGTTTCTGGTTTTATTTTTAAGAAGCACTCTTCTGGTCTTTCTCATCAGAAAGTCATATTTTTCATGTGCTACTTTCTTGCTACTGACTAGTGATTAATACAATTATGTACTGTGATTAATACAAGTTCACTTTTCTCTGTCATGGAAAATACCGCATAAAAAAGTTCATAACCCAAAATCCCTTTTTATACATAACCATCAACCTTTTACATTCCACAATGCAACGGTTGACCTCAAATTTTAAATAATAGCCTGTAATGGAAGAAAGAAATCTATGTAGAAGTATCTTCACAACCAATCAGTATGTCATTTTGATGTGCTCGATGTTAAATTTCTGAAGACATACGTCAAAGATATTTAAGTGCTACTGCTTGCATGCAATAGGTACACTATTTTTTAGGAATCTAAATAGTAATTTTGTATTGCAATAGTGTTTGATGATTTTTGCATGGTGCAGAAATGAGTGCAATATGGAAAATGTGAGATATGTCTATGCACTAAATAAAATTTGTTTCCTCATCCTGCACCTGCAACATGCAGGTAATTTCCTTATTTCTGCGATCCAACATAAAAGATGCCAAATTGGATGTACTAGACAACAAATCTGGTATGTTTCTGCCTTCTATTCTTTGCAGCTCTCTAGCAGTGAAAACAGCATGTAATTCAGATTTAATTTGCTGCTTAACTATACTGTGACCCTGCTAGTGGGAAATTTCCCTGACCTTCTCCCAACAAGAGCATGTCTTGTGTTGTTTTCCTATTTCTACCTGTCATTTCATTTCAAATGTCAAACATCTTGGATCCTGCCTATGCTTGCAGTGGTTTCGGCAAACTAAGAGTTGTGCTTTGTTTTCAGAAATTGATTATGTAAAAGTATTGAATAGAATCCTTCCACACGATATACGTGTAATTGGCTGGTGTCCCGTTGCAGGAGATTTTCTTGCAAGGTTAGTTTCAGCTCTATGTATACTTTGTTTTTGTTGGAAATATTAAAGGCACTCTCACTCAAGTCTCATCCCATTGATAAATATAAGTTCTAAGAAAAGAGATTGCGTGTTTATTTGTTGATTTATTCCCTTCTTTTGAAGATAAAGCATTTAATTTTTTCTTCTATTCTACTGTATCATCTTGCACTTTATGTTCCTATGTCTGATAGAATCTTATCTTCCCTTACTGCTATTTTGTAGATTCTCTTGTTTGGGCAGGGAATATAAGTACCTGTTTTGGAAGGGCGACTTGAATATATCGGTAAATATGCCATTCCTTGATTTCTATAATTGTTAACTTGTCCATGTTGAGTTCTTGACAAGCTGACTTCAAACTGTCAACAGGAAATGCAGAAGGCTGCATTAAAATTCATTGGCGAACATGACTACAGGAATTTCTGTAAGATGGATGCAGCAAACGTGAGTAACTACAGGCGACATATTACAGATTTTAATATTTCAGCCTATGACCAAAGGTTAAATTTGCATTTTAATCAAAACTCTTTTATCCATAAATGTGTGAGATGCTTGCCATACCTGAATTAAATCATGGAAGTGCTTTATATCTTCAAGGTCTAACTATGATGAGCTGTGGGCCATCACAATCAAGGGGAGTGCCTTCCTGTGGCATCAAGTTCGCTGCATGGTAGCTGTGCTATTTCTCATTGGTCAAGGTCTTGAGTCACCATGTGTAAGTAAAATCGCTCCTAAGCTTTTTTTTTTCTCTTAATAGGTTATTGTATGGTATATTGGTATATGCCGTTAAAGTTGGCACAGACTTTCCCTTTGGGCCTTAGGTATGTAAGCTACATATCTTTAGGCCCATATAGGTTCCTATACTTGCATTGCATGGATGATTTCACTTGGCACTGATTGGTGCAATTTTAGGTCTCTTATTATCTTAGCCAATGCAAGTTCATGGATGCACATTGAGTTAACGAGTTCATGGCCAACCGCCAAATTGGAATACACATGCAAGTTTAAAGACCTGATGTAAAAGTATTCTTTATTACTTGGCTGGAATTTTTAGGGTTAATCCCCTTTAGATATTTCTTATTGCTTAACCCATAATACAATATAGGCTACCTTTATATACTGAGGTGTGTCTAGATAGGGGAAACGGAAACAAACTAGTAACCTGATACTACTAGGACTCTGTTGGACTCTTATAACAGAACTAGGAAACTCTAATAGAGAGCTTATTTGGATTCTCCAAATGCTACAGCACTTGCCAATCCGACTTATCTCTATTATGACACTGCTGATATACTATACCATAACATCCAGCCACAACAACAAAGAAATCTTTCAGACTTGCACACGTTTTTTTTCTTTCGATTATTACATTTGCTGTTTTTCCTTTTCTTTTTATTTTTGCAACAGATAGTTGATTCATTATTGGATATTACCAAAACTCCTAGAAAACCTCAATACAAGATGGCATCAGAGATTCCATTGATTCTGCGATCCTGTCTGTTTGATGAGGTCAACTTTATGTGTTCATCAGGTATTCATACTTTGGCCATGTCTGTCTGAAGTTGTATTGAAATATCATCAGTTCATTTTCTGTCAATAATTAATTGCATTGTATATTTTTGCCTGAGTTATTTCAGACTGAATGTAAACAGCAGCAGTGAAATATGGTTCTTTCAGAGATAATATAATAGACAGCCATGAATAGTTGTTTCATAGAACTTGTGTATGCAAAGCAATTTAAGTTTTTCATTTGTAAAGAAAATATCTTTTGGGTTCAAAATCCACCCTCTACAGTTTTTGCTGCCTGTTCGCATATATTTCTAGCTTTTTCATGGTGTAATTAATTGTGATGCAACATTGTTCCGTTTTAGAGGCCAGTCAAGCTTTGATTGAGCACTTGAAAGATGAATATCATCAGTATATGCTCCAGGCTGCAATATTTTGTGAGGCATTGTCCTGTTTATGTTCTCCAGGTACATTCATGTAAACCTTTTCCATTTTTCCAGAAGGCTAAGATCCTTTCTCAGTTTTATGCCATTTTTAGTGAACTAAAAGTGAGATGTCATTGCAGAGCCTGATCCATTTGAACCTCGTCACAAGAAGAGGAATCATATTCCTCTAATGTCACGACAAACAGAACGTAAGTAATTGTTATATAGTTCTTTACTTCCAACACATTTTTGTTAATATGTTTTCCTAAGGACAAGCAAATGTTTTATTTGGTTATGCCAGCCTCTTGGTTTACTCTTCGACATTCTGACAGTCCTACCGTTAGTTTTCTGTCATTAGTTTATTGTGCTGCAACTGTTAATAGCCTTGCCTATAAAATGCCATCAGTTGTGCACATATGATATGTTGGTGCGGTGCTTAGTTTTGATTCTTTCCTTGTTTATCTGCTTCCAAGTGAAACTGAGTCGCCTTCTTGTTTCAGCTTCGTATGAGGAACGGATAGCAAAGGTCAAAACAAAGTCAGCTGGTAGTGTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012760