BGIOSGA012764

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Revision as of 09:52, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012764| Description = 3-ketoacyl-CoA synthase| Definition = Oryza sativa Indica Group BGIOSGA012764, complete gene.| tag = OSJNBA0011H24.1|...")
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Gene Name

BGIOSGA012764

Description

3-ketoacyl-CoA synthase

Definition

Oryza sativa Indica Group BGIOSGA012764, complete gene.

LocusTag

OSJNBA0011H24.1

Ensembl Transcript ID

BGIOSGA012764-TA

Ensembl Protein ID

BGIOSGA012764-PA

Length

1407

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:16964437..16965843

Sequence Coding Region

16964437..16965843

Genome Context

<gbrowseImage1> name=IndicaChromosome03:16964437..16965843 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:16964437..16965843 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCTCACGCCTTTGCTCGCCGTCGTGCTCCTCCTGCCGCCGGCGCTCGCGGTGGCGCACATGGCATGGACGGCCGCCTCCCGCCGCCGCCACACGCGGTGCTACCTCTTGGACTACGTCTGCTACAAGCCGGAGGATGACCGCACGCTGACGGCGGAGCTCGCCGGCGAGATTGTCCAGCGCAACGAGCGGCTCGGGATGGCGGAGTTCCGCTTCCTCCTCCGCCTCATCTCCCGCGCGGGGCTCGGCGACCGGACCTACGTGCCGCGGAACCTCCTCGACGGCCGCGAGGAGCTCGCCGCGGGGCAGCTTGACGCGGTCGACGAGATGGACGCCTGCTTCGACGGCGCCGTCCCGGAGCTCCTCGCCAGGACGGGGCTCCGCGCCCGCGACGTCGACGTGCTCGTCGTCAACGTCAGCGGCTTCTTCCCGGAGCCCTGCCTCGCGTCCAGGGTGGTGCGCCGGTACGGCATGCGCGAGGACGTCGCGGCGTACAACCTCTCTGGGATGGGGTGCAGCGCCACGCTGGTCGCGGTGGACGTCGCCCGGAACGCCATGCACGCGCGGTCGCCGCGGCCCGTGGTGGCGCTGGTGGTCTCGACGGAGTCGCTGGCGCCGCTCTGGTACGCCGGGAAGGAGAGGACCATGATGCTGGGTCAGTGCCTCTTCCGGTGCGGCGGGGCGGCCGTGCTGCTCAGCAGCGACCCGGCCCACCGCGGCCGCGCCAAGATGGAGCTCCACCGCCTTGTGCGCGCCACCACCGCGGCCAGCGACGACGCCTACTCCTGCATCATGCAGCGCGAGGACGACGACGGCTTCCTCGGGGCCAGCATCAGCAAGGCCCTCCCCAAGGCCGCGCTCCGCGCGTTCGCCGCCAACCTGAAGCGCCTCCTGCCGCGCGTCCTCCCGGCCATGGAGATCGCCCGGCTCGCCGCCGACCTGGCATGGCAGAATCTGCTGCAGTGGCGCCGCCGAGGGCAAGCCAAGGCCAAGCTGAAGATCAACCTCAAGGCAGGGGTGGACCACATCTGCCTCCACGCCGGCGGGGTGGCGGTGATCGACGCGGTGAAGAAGAGTTTCGGGGTGGAGGAGCGAGACGTGGAGCCGTCGAGGATGACGCTGCACCGGTGGGGGAACACGTCGGCGAGCAGCGTGTGGTACGTGCTGTCGTACATGGAGGCGAAGGGGAGGCTGAGGCGGGGCGACAAGGTGCTGATGGTGACGTTCGGGTCGGGGTTCAAGTGCAACAGCTGCGTGTGGGAGGTGGCCGGCGACATGGCCGACAAGGGCGCGTGGGCGGACTGCATCGACGCCTACCCGCCGGAGGGCAAGCCCAACCCGTTCTTGGAGAAGTTCGCTTGGGTCAACGATGAAGTCGCCGATGAATCCTCCTCGCCGTTCTAG</cdnaseq>

Protein Sequence

<aaseq>MELTPLLAVVLLLPPALAVAHMAWTAASRRRHTRCYLLDYVCYKPEDDRTLTAELAGEIVQRNERLGMAEFRFLLRLISRAGLGDRTYVPRNLLDGREELAAGQLDAVDEMDACFDGAVPELLARTGLRARDVDVLVVNVSGFFPEPCLASRVVRRYGMREDVAAYNLSGMGCSATLVAVDVARNAMHARSPRPVVALVVSTESLAPLWYAGKERTMMLGQCLFRCGGAAVLLSSDPAHRGRAKMELHRLVRATTAASDDAYSCIMQREDDDGFLGASISKALPKAALRAFAANLKRLLPRVLPAMEIARLAADLAWQNLLQWRRRGQAKAKLKINLKAGVDHICLHAGGVAVIDAVKKSFGVEERDVEPSRMTLHRWGNTSASSVWYVLSYMEAKGRLRRGDKVLMVTFGSGFKCNSCVWEVAGDMADKGAWADCIDAYPPEGKPNPFLEKFAWVNDEVADESSSPF</aaseq>

Gene Sequence

<dnaseqindica>1..1407#ATGGAGCTCACGCCTTTGCTCGCCGTCGTGCTCCTCCTGCCGCCGGCGCTCGCGGTGGCGCACATGGCATGGACGGCCGCCTCCCGCCGCCGCCACACGCGGTGCTACCTCTTGGACTACGTCTGCTACAAGCCGGAGGATGACCGCACGCTGACGGCGGAGCTCGCCGGCGAGATTGTCCAGCGCAACGAGCGGCTCGGGATGGCGGAGTTCCGCTTCCTCCTCCGCCTCATCTCCCGCGCGGGGCTCGGCGACCGGACCTACGTGCCGCGGAACCTCCTCGACGGCCGCGAGGAGCTCGCCGCGGGGCAGCTTGACGCGGTCGACGAGATGGACGCCTGCTTCGACGGCGCCGTCCCGGAGCTCCTCGCCAGGACGGGGCTCCGCGCCCGCGACGTCGACGTGCTCGTCGTCAACGTCAGCGGCTTCTTCCCGGAGCCCTGCCTCGCGTCCAGGGTGGTGCGCCGGTACGGCATGCGCGAGGACGTCGCGGCGTACAACCTCTCTGGGATGGGGTGCAGCGCCACGCTGGTCGCGGTGGACGTCGCCCGGAACGCCATGCACGCGCGGTCGCCGCGGCCCGTGGTGGCGCTGGTGGTCTCGACGGAGTCGCTGGCGCCGCTCTGGTACGCCGGGAAGGAGAGGACCATGATGCTGGGTCAGTGCCTCTTCCGGTGCGGCGGGGCGGCCGTGCTGCTCAGCAGCGACCCGGCCCACCGCGGCCGCGCCAAGATGGAGCTCCACCGCCTTGTGCGCGCCACCACCGCGGCCAGCGACGACGCCTACTCCTGCATCATGCAGCGCGAGGACGACGACGGCTTCCTCGGGGCCAGCATCAGCAAGGCCCTCCCCAAGGCCGCGCTCCGCGCGTTCGCCGCCAACCTGAAGCGCCTCCTGCCGCGCGTCCTCCCGGCCATGGAGATCGCCCGGCTCGCCGCCGACCTGGCATGGCAGAATCTGCTGCAGTGGCGCCGCCGAGGGCAAGCCAAGGCCAAGCTGAAGATCAACCTCAAGGCAGGGGTGGACCACATCTGCCTCCACGCCGGCGGGGTGGCGGTGATCGACGCGGTGAAGAAGAGTTTCGGGGTGGAGGAGCGAGACGTGGAGCCGTCGAGGATGACGCTGCACCGGTGGGGGAACACGTCGGCGAGCAGCGTGTGGTACGTGCTGTCGTACATGGAGGCGAAGGGGAGGCTGAGGCGGGGCGACAAGGTGCTGATGGTGACGTTCGGGTCGGGGTTCAAGTGCAACAGCTGCGTGTGGGAGGTGGCCGGCGACATGGCCGACAAGGGCGCGTGGGCGGACTGCATCGACGCCTACCCGCCGGAGGGCAAGCCCAACCCGTTCTTGGAGAAGTTCGCTTGGGTCAACGATGAAGTCGCCGATGAATCCTCCTCGCCGTTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012764