Os12g0464400

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Revision as of 10:29, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0464400| Description = Glucose/ribitol dehydrogenase family protein| Version = NM_001073272.1 GI:115488505 GeneID:4352184| Length = 2525 bp...")
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Gene Name

Os12g0464400

Description

Glucose/ribitol dehydrogenase family protein

Version

NM_001073272.1 GI:115488505 GeneID:4352184

Length

2525 bp

Definition

Oryza sativa Japonica Group Os12g0464400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:16546315..16548839

Sequence Coding Region

16546316..16546633,16547029..16547221,16547313..16547398,16547498..16547629,16547713..16547877
,16548333..16548620

Expression

GEO Profiles:Os12g0464400

Genome Context

<gbrowseImage1> name=NC_008405:16546315..16548839 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:16546315..16548839 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ctctctctctgccaaacttgtgttcttgcgaccctgctctgctctgatacgtgtctgaagctgaaaacgatcgaagagaagatcggtcgaggttgccgaggaggaaggaaggaaggaaggaagaaggcgacgatggtggatttggtgaacggcgtgctcaactgggtggcgacgccggccatggtggccagcctgctgctcttctacccgccctactacctcttcaagaccgtccactccttcctctcctacctcttccccgacgacctcgcccgcaaggtcgtcctcatcaccggcgcctcctccggcatcggcgagcaattagcatacaactatgctctgaaccgggcatcattggtccttgttgcaagaagagaatggagcctgcgtaaagttgccgatcaagcgttcgagcttggagcacctgatgtgatcattcttccgggcgacgttgcgaatcctgaagactgcaaaagatttgttcagaccgcaatcgatcactacgggcgattggaccatcttgtgtgcaacgctggcatcgcaagtgttggcgcgtttcaggagattccagatgttactaactacagctctcaatttgatgtgaacttctggggttcagttcagtcaacttttgaagctctccctcatctgaaaaggagccgaggaagaatcgttgttactgcgtcggcaaccggatggaatcctgttccaagaatgaccttctacaatgctgccaatgctgcactgataaacttctacgagacgctgcggacagagcttggtagccaagttggaatcacaattgtaacacctgggtggatcgagtctgagatgtcaaaagggaaatttctcaaggatcatggtgaaatggaggtcgatcaagaaatgcgagatgctcaaattggtttatttcccgtggagtacgcgaagaattgcgcaaaagccatggtacaagcggttcggcaagggaagcgttgtctcaccgtgccaccatggttcagcacaatgtacctgtggagggtattcgcaccggaggtcgtcgagttctgctaccgcctcctgtacatgcaccgccatggtggtagccaagctgatgcgccgagcaagaagatggctgaggctggtggaaagaagctcttgtatccaacgtcgctgcgctctgatgacatcaaggatgagtga</cdnaseq>

Protein Sequence

<aaseq>LSLCQTCVLATLLCSDTCLKLKTIEEKIGRGCRGGRKEGRKKAT MVDLVNGVLNWVATPAMVASLLLFYPPYYLFKTVHSFLSYLFPDDLARKVVLITGASS GIGEQLAYNYALNRASLVLVARREWSLRKVADQAFELGAPDVIILPGDVANPEDCKRF VQTAIDHYGRLDHLVCNAGIASVGAFQEIPDVTNYSSQFDVNFWGSVQSTFEALPHLK RSRGRIVVTASATGWNPVPRMTFYNAANAALINFYETLRTELGSQVGITIVTPGWIES EMSKGKFLKDHGEMEVDQEMRDAQIGLFPVEYAKNCAKAMVQAVRQGKRCLTVPPWFS TMYLWRVFAPEVVEFCYRLLYMHRHGGSQADAPSKKMAEAGGKKLLYPTSLRSDDIKD E</aaseq>

Gene Sequence

<dnaseqindica>2..319#715..907#999..1084#1184..1315#1399..1563#2019..2306#gctctctctctgccaaacttgtgttcttgcgaccctgctctgctctgatacgtgtctgaagctgaaaacgatcgaagagaagatcggtcgaggttgccgaggaggaaggaaggaaggaaggaagaaggcgacgatggtggatttggtgaacggcgtgctcaactgggtggcgacgccggccatggtggccagcctgctgctcttctacccgccctactacctcttcaagaccgtccactccttcctctcctacctcttccccgacgacctcgcccgcaaggtcgtcctcatcaccggcgcctcctccggcatcggcgaggtgaggcgactgacggccacgggctctgctctgtgtatcagctttttgcaggctgactgtttttctttgaattaattgctctgatttttgtgtgtttggtcatgttttgccattgtgttcgtgtgcctgctttgtagtatcgcatctttgttctattatttttttccaaaactatgataactgtctgacagtttcagagtaaaatagtttgagcatgttgttactttgaagatcccaaattaggcgcgttgcgtacaatttgtaaaagttcgaaggatatatagtaccaccatatgtttgtgcatagttcaactttaggttgttgtaattctctgtttatttctgtatgccgagatgaagatttatttgcgtatgtcacgtgatgatttttgcagcaattagcatacaactatgctctgaaccgggcatcattggtccttgttgcaagaagagaatggagcctgcgtaaagttgccgatcaagcgttcgagcttggagcacctgatgtgatcattcttccgggcgacgttgcgaatcctgaagactgcaaaagatttgttcagaccgcaatcgatcactacgggcgatgcaagtctccaatatcactgatttgttcagtaaatttcttcagcaaaagtatcatttcagtacttcattgagctttacacttgtttttcagtggaccatcttgtgtgcaacgctggcatcgcaagtgttggcgcgtttcaggagattccagatgttactaactacagctctcaatttgtaagagcaacataattcttgatgagttcttatcagttcagtgtgtagtttattcaagatccgtaaattaaccactggtatgaactacttcattttcaggatgtgaacttctggggttcagttcagtcaacttttgaagctctccctcatctgaaaaggagccgaggaagaatcgttgttactgcgtcggcaaccggatggaatcctgttccaagaatgaccttctacaatgtaaattaatgtcctgcagtcttagtgaaaatgcatatgtgacagtattgagactgatgtttgtcttttgctcctctgcttaggctgccaatgctgcactgataaacttctacgagacgctgcggacagagcttggtagccaagttggaatcacaattgtaacacctgggtggatcgagtctgagatgtcaaaagggaaatttctcaaggatcatggtgaaatggaggtcgatcaagaaatgcgagatgtaagaacacccacttgtcaatttcacaagtccttctgaaatcacactaggctccttgatcacaacataagattcagacttcagtaccactgctttgaacattttttcatacaaagttctagactataagggggcatacaaagaaatctaaacttaggcttcattcgttcctgggcaatctgggggattgagagagaaaagcatctcgttttccgtgcgcacgcttaccaaactgctaaacggtgcgttttttacaaaaaaattctataggaaagttgctttaaaaaatcatattaatccatttttgaagtttaaaatagttaatattcaattaatcatgtgctaatggctcacctcgttttgcgtatctttccaatctccccaatccccttctcctcaaacacacccttagttcagctggaatgaaatattttacaatatatatatattttcaggctcaaattggtttatttcccgtggagtacgcgaagaattgcgcaaaagccatggtacaagcggttcggcaagggaagcgttgtctcaccgtgccaccatggttcagcacaatgtacctgtggagggtattcgcaccggaggtcgtcgagttctgctaccgcctcctgtacatgcaccgccatggtggtagccaagctgatgcgccgagcaagaagatggctgaggctggtggaaagaagctcttgtatccaacgtcgctgcgctctgatgacatcaaggatgagtgaatgcccagttcttctgagcatgaacttcagtatattcctctgaagaactctgcaggtctgaaccttccatgaaatgggccaaatagataaaatcttagtatgaactgtggctatgatcatggaaaaatatgtatgtgctactattctgtgtatgaataagttgtgttctaatagtgctgtgttcttaactggtatgaattatgcatcctatttaccact</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0464400, RefSeq:Os12g0464400