Os12g0465700

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Revision as of 10:29, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0465700| Description = Conserved hypothetical protein| Version = NM_001073274.2 GI:297613132 GeneID:4352186| Length = 7641 bp| Definition ...")
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Gene Name

Os12g0465700

Description

Conserved hypothetical protein

Version

NM_001073274.2 GI:297613132 GeneID:4352186

Length

7641 bp

Definition

Oryza sativa Japonica Group Os12g0465700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:16648315..16655955

Sequence Coding Region

16648585..16649283

Expression

GEO Profiles:Os12g0465700

Genome Context

<gbrowseImage1> name=NC_008405:16648315..16655955 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:16648315..16655955 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgcggtttcaatacttttagattatttgatcgcttcatgacatctgaagttactgataccatcttatgtattgtgcatactaggctactaccctaccatgtggttgctgactatgaggctgaagaagatgacagaatccttgacagtgatacaactggacagattccttcgcgcctgcagcaatgggatcataacattctggtcaaaattgctgagttcacaactacttttgagaaacaagttttggcgtacaatataatgaccaagaaaagagccatcggcgagttcagatcagaggagcggctcatgctggagcaggctttgttaatggaggaaaagcaagctatgatggggctaagagcagagatagaatcaagggagaaagcaggtcgtgaggctgctgaagctaagatgcgtatggcaatggctgaacaagctcgagcggaggcccaagcgcactcggagatgataggtcatggccctttgagggcccatgctgcagcgtcccaaggcgaagatggccctagtcatgagatgatgcaagagcaaggtgaagatggatggggaaatgctcaaagggacgatgaagatccatctgaagatttccttaatgatgaaaatgaacctgagaatgggaactctgatatgcaagaggactggcgcagatcaggagaactcgatctgaactctaggtaa</cdnaseq>

Protein Sequence

<aaseq>MCGFNTFRLFDRFMTSEVTDTILCIVHTRLLPYHVVADYEAEED DRILDSDTTGQIPSRLQQWDHNILVKIAEFTTTFEKQVLAYNIMTKKRAIGEFRSEER LMLEQALLMEEKQAMMGLRAEIESREKAGREAAEAKMRMAMAEQARAEAQAHSEMIGH GPLRAHAAASQGEDGPSHEMMQEQGEDGWGNAQRDDEDPSEDFLNDENEPENGNSDMQ EDWRRSGELDLNSR</aaseq>

Gene Sequence

<dnaseqindica>6673..7371#acggattttgcccgaaactgaagctccaccaccgtttcccccacagatctcactcctcgctgctcccccgccatggacgacgccgcgaaccccaccccgacttcctcctcctcctccgccgccgccgcagccgcggccgccgcggcgcagcaccagcagcttcagcgccagatcttcctcatgcagcaggcccaggcgcagtcgcagtcgcagggccacgccccgacgccgcagcagctgtcgcagcaggccatgtcccgcttcccctccaacatcgacgcccacctccgcccgctcggccccatccgcttccagcagcccccgcagccgcagccgcagccgcctcagcctccgccacagccgcaaccgcagcagcagcagccgcactccggggccccgtcgccgtcgcagtcgcaggcgtccccccagcagcagcagcagcagcaggcggcggcgatggcggcggctgcggcgagggtgcggagccccgaggtggagatggcgctgcaggacgcgatgcgggtgtgcaaccccgacatcaagacgcccttccagtccctcgaggacgccgtcaacaggtgggggaatcgcaccaaatttctctgcatcttttttttttcttatatacgttattatccacgattttgctggtaatcctcatccatttgatttcgctgcgtcagctgaaattggggtgctttaaatttttaactgtatactgatttaggctacgcgttccggatgaatttgttgccaattcgggctcgaggcttgcccggatcgtttcccattttttgggtttcgattattagaatttgggagcgtcttagaaattttaacattaatcttcattccttgttaaacaaatcagacaaaattctcccaaaaggtgaatagtaggggcattaggggattggaggatcaggacaacattttggcctgtatgtcttttcttttccacagagcagattgttaatgctgtatgtggttcatgagtgaaactcgtggtccaatttaggaccagtttagcacgaattgcaggtgacatgcttttcggcatatgtgcctctggttattttctattgatggggattttgtttatttaaggtgacatacttttagcttttggtcatatactaaccagtaattgcaagctggtttcttcgtgtagtaacttgagtgattgtatggattgctttatcttagcagattgttatcttagatgttttaactccagttattcttaacccacataagatttttaactgttttagtcattcttaacttcttttccctgatccattccattttagtgactgaaaaattcttgtttcagcattctgctcaaaatgcttaatgagcatacaagcaaagaatgtagtcagagcaaccagaagttatgcagcataaactaagttgaataaactaaactgcattcagtattttttaagatagcaaattttcctccttgtttctattcggtgataaatgcaaaggtccataatacttttactagcttttccaaataatcgctgaccatggttgagtggaataaatggtatgcatctgctgttaaggtcaatactttatttagcagtattttctttgctagtagaaaactcttttattttgctcggatcttactatattgtataatgatttaggtagaactatggaagggcatattgtattgggaacatttataggaaccctattgcattccaagagatgtatgaggcacaatgaccaccctacaatgagagcttcctgttcattctttgcatggagctttgcgcactaacatggttttcaaaatgtaacaatgaccactaatttcttttacaacgtatttataaaacctaactccattacaaaagtactttctgtaacaaatctacacatacaattttcatttttcttgcttacaatccaaatatttgaaaagatatacatgtatgaagttttgacttaggacatgtccaaattgacatatttttttcactggaaggggtataccttatatatctttgtatgatttcttagaaaaatatgactgcacctattagtgcgaatattttcttgagaaaaagagttgcttctgggtactggggccaatttatgtaccaacaagtttgttctgtatgaaactactctttatgagaaaaactgggaaaaaagattttaatgttaggatgtctgtgcaaaaattattaagtattatataaatatgttttgagaacacaaatattctaactgtctgtggacgataggactaactgcatacaattactacttgagttccttcaaatttttagtgcacatattaaccagatctttttctattatctttttatggtatagttgggcacacagtatacacgcttctagatttgtttccttttgatatatgtggttgcctctggcattcaaggtgttaaattcacagcaaccatttttcttccagaccataaaaagcttaatacttggaccataagtttaatagtgtaacctctgaaaattggttggctgcctgccacaggagttctatttgttaacatgcatgatggaaggcagatcagtcctagttttggtagtttttcaataacagggttgtaatcatctattttgttaaatataatttgcgttgtttaaaaacaatgggaattacagggtggcatatttccaattttaagaatctgggtggcatgaaacgccgtgttttgaagtggcgtgtaccacattttctgtttagatattaccatttttaccaatgttatagtcatgtttaaaatactaaatcggcactgttttgattagcggagcacataaaaaagattactaccttccattcggacccacacggttttgacccaaaaggtatctgcgtagtcacatccaactggcaagtttaggactggtgtatcctttccaaaaaagtttaggactggtttaacaaattttgcccgaaacaaaagccccaccatttcccccagatcttctcctctagccaatccacctccgcccccaccatggacgccgccgcgaactccaccccgacctcctcggcatccaccgtggcgcagaaccagctgcaccagcgccagatcttcctcatgcagcaggcccaggcccaggcgcaggcgcaggggcaagggcacacaccgacgctgcagcagctgtcgcagcaggccatgtccttcttcccctccaacatcgatgcccacctgcccctgcctggcccggactccaccccgacctcctcggcatccaccgtggctcagaaccagctgcaccagtgccagatcttcctcatgcagcaggcccaggcgcaggcgcaggcgcaggggcaagggtacacaccgacgccgcagcagctgtcgcagcaggccatgtccttcttcccctccaacatcgatgcccacctgcccctgcctggcccgatccgcttccagcaacccctgccccagcagccaccaccgccgcagcagcagatccactcctggggcccgtcgctgttgcagtcgtgggcgtccctccagcagcagcagcaggcggcagtggcagccgtggcaagggtgcagagccctgaggttgagatggctctgcaggacgtgatgcaggtgtgcaaccccgacatcaagacacccttccagtccatcgaggatgccgtgaacaggtggggaaccgtatcgaagttttttcctttttcttccattatccatgatatcgcctataatcttgatcagtacggtttcgcttgcttggctgaaattagggtatttttattttttacctgtactgattccagcattagcattcgagatgaatttgttgcctattcttgcttgtttggattgtttgccgtttctggggttccaattgatgattaaaaattgggaacatctaagaaatgttaagtaatttccattttatttggtggattgtgcatgttgttacatgctaatgcttggaactctggaaaaacacatcaaacaaaattgtccaaaaaagtgaatactaggactggagaaccagggcaacgttttttcctggtcaaggtcttgttgtgcatatttcagaaaacaaaatcaagagtaaacacatacaaggtctatataaacagacagcacaatcaaaaaattctatgagcacaggcagatatagcagttcccttttcccgatggttcaaattaaatgaatataaacaaatacagctccactgtttaatgcttagcaacctgttgaagctaacagcaaggcaggttcagaatttcaggtatattactgtagaacaaaactggatataccaaaagtgatcaacaaggcaaattcccacaaaagcagctaaaaggttaacaaaaattatttgcagtcgcgcacatactacaggagacaatgacaaagatcctcctcttagccctcccttcacaagcttgacctaatctaccgaattggcaagcatgtatctaaacaatcaatttcataccctggatgtggatcatgagtgaaactcacattgcaaagattaggaccagtatagcacgaattgctggttatcttttagggctatagtccttgattagttttgattcatatatatttaatattttattaatgtggcatactttagtttctggacttatattaagttgtaattacgactagattttccatgagtggtttcatggattgctttatcgtaggtttgctatagaatgtttgtgctactgataaggatgtctttgcaacttctccagtcatccttaacctttctttttcataatccattctttttttctgtgactaattttcttctactgattctgttattataagcaaagcatgaagtccaagcaatcatgagttatgcaacataaatgaagttgaatagacaaaaccacatactcattctttaagatggcaattttttccttctttccattcagtgataaatgctaacgttcacagtactgttactagtttttccaagtaattctgtcagtggtcaggtggattaggtggcgtgcatctcttattaaggtcaatactttatttacttcattgcgactatttttatattttactccaaaatcataaaaaagtgttaatacttgaatcataagttagttgtgtaacttttgaaagtttgttggctgacaactgctgaaattctgtttgtagtttcagtatctgtttttccaatgctggccgttttcttgatctgaaaggtttagtactttcttgttgtaaccaatccttagggttttgctgatcatattatactgtttcgtcgtgtgtctgagggatgataatatatacgtaccaagaagatggcattaggatcatcggaaatgaggggtggaaatgaaaaggggggttcgggggatctcctatccctgttatgacttaggaggaaaaggaagagaagtgggttttgatttgggatttgggacaaaaatgagttcttttttcatgattctaaagcctaaacacaatggaatgtgtgtttggttgggtggttgggctgtggaaaaagagcatcagcacctttttactcacctattgagcattagcgtgatgtctctgctgttgacacccattcactgggcctgttgctctgtgggttgttctgttgtcggtagccatcggctgaagacccaccttcatgaatcatccccttgagttcattttgactctgagatactcgccatctgatttcctaggcgagatggcgtgaagaattgatacaggatcgtcgtttctttgccagctgcgcatccattcagccggtcgtattcctaattaatgttgctgctaatctcgactgctctcgctccttgatctggtcttcttttctgtgatttccttttacttttattttccgaaccaaaataagtggagtgattacaaaatatgggaagagaattaaacatcaacacctatagacccagactgccaaacccagtcttttgtatcctactccatatgcttttcctaaacccatcacctatccaaatgtcactaaagagtgattagtatagcaggagtgaagccctatttcctcatggcatatgggcctacaactcttaacactgcataatacattaaacaactgataagtctgataaatcatttagtaaagaatattacactaacagttatgtcaaaacaaaaatctgttgacctgtaaattcttctgggccattatcccaacaatagccttgtatgctttgaaggggtagcctcgtgatagaagaaagacactcttcactggtgatatcacatgcaaggatgcaaaggagtgcagccaagagtgttgtgatgaaatagctcatcgaatcatgatcaaacattttagttgtgatgcagaaattctttatgtgctgagtatggtgggggtccccaatgtgggtagaccatctcacctgtctcatccaattctctttttcctgtatgggtgcacttcatcaactgtcagtgaaaatacaactatgggaatcaatgattttcactttacatgtcagagaattcaattatataaatccttctgacaggataatgttaacaaccattctttcaagaacatttttcatcttagatattttcaaatatgccatgtttgagcataagttctgaattggcagataacttggattgagtttatttgctcaaatgtgcggtttcaatacttttagattatttgatcgcttcatgacatctgaagttactgataccatcttatgtattgtgcatactaggctactaccctaccatgtggttgctgactatgaggctgaagaagatgacagaatccttgacagtgatacaactggacagattccttcgcgcctgcagcaatgggatcataacattctggtcaaaattgctgagttcacaactacttttgagaaacaagttttggcgtacaatataatgaccaagaaaagagccatcggcgagttcagatcagaggagcggctcatgctggagcaggctttgttaatggaggaaaagcaagctatgatggggctaagagcagagatagaatcaagggagaaagcaggtcgtgaggctgctgaagctaagatgcgtatggcaatggctgaacaagctcgagcggaggcccaagcgcactcggagatgataggtcatggccctttgagggcccatgctgcagcgtcccaaggcgaagatggccctagtcatgagatgatgcaagagcaaggtgaagatggatggggaaatgctcaaagggacgatgaagatccatctgaagatttccttaatgatgaaaatgaacctgagaatgggaactctgatatgcaagaggactggcgcagatcaggagaactcgatctgaactctaggtaagattggtgagctggctgagattgtgggggaaaaataagaaccatgaaagtaggtgaaggcatgcgttacatctgccaataacttttatctctagttaagtacttaactggttgtatgatccgaggttaagttagctgcctttgtggctgtaagctcgtgattttaagctacctgttagctgccctgttgttaaacagcgtgcagaatgttgtgatagcctcttttgtttcacttcactctgtttttttaagatgcgttgttaggatgttg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0465700, RefSeq:Os12g0465700