BGIOSGA012807

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Revision as of 09:52, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012807| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012807, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA012807

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012807, complete gene.

LocusTag

OSJNBB0004M10.19

Ensembl Transcript ID

BGIOSGA012807-TA

Ensembl Protein ID

BGIOSGA012807-PA

Length

5944

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:17793375..17799318

Sequence Coding Region

17793375..17793454,17793606..17793675,17795080..17795134,17795363..17795445,17795523..17796354
,17796688..17796790,17796863..17797002,17797153..17797384,17797709..17797844
,17798714..17798808,17798887..17799010,17799196..17799318

Genome Context

<gbrowseImage1> name=IndicaChromosome03:17793375..17799318 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:17793375..17799318 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGGGGGACGCGGAGGACCTGCCGCCGGCGATAACGAAGCTGGGGCGGCACTTCAGGCTCACGGAAGCGCACATCTGGGATGGCTGGTACGCCGCTGGCGCCGACGTGAGCCACAGGAGCTGGCGCTCCGATGATATCGATTCCGGCGGCTGTTGTCAAACAGATAAAGTCCAAAACAAGCCAACCAAACAGACAGATGAAGGCGATTTGTTTGTTGAAGATTTAGAATTGTCCAACCTGATGGGTTCTTTGGGGCTTCCTGTTTCATTCAGCACAAGTAAAGAGAAAAAGAATGCACCCAATAAGGTAAAGAAGAATGGAAGGAGAGTCTCCTACGAAGCAGCAAATACTCTAATCGACGATGATTCAAGGACATGCACGGGTACTAAAGAAACTGAAAGTATTGTTCAGTTGATGGCTTGTGTGGAGCAAACTAACCCATGCAGTTCATCTAGGATCACTGTGGGTTACAATGAAGTCTGCCAAGGTGATATCGAGAAGATGGACAAAGACATTGTTTATGCTAATGAACAGGAAGAGTCTGGTGATCTCTGCTCTTCTAAAGTATTATCAAGTAGCAAAGCTGAAGATAACTATGAACATGAGACTTGTCAGTTTCATGCTAACATGAACAACCCAGTAAAAGCAGATTCTCCTGTTCGAGAAAATGAAACTGCAGAAGTTGTCTTGCAATTGAACAAGGAGATGCTGGGGCAAAACTCTGTTGATAATGAATCTAGATTCTCCTCTGCTGAGATTTGTATGGAAGGAGGATTATCAACAATAAAAGATCAACTATCTGGGGAAACTCCTTCAACATCCCATGATAATAAGGATGTTGATCATGAAACTTGTCTAAGTTCAGCAGAGCCATCACCTGTGGATAATAATCCTGCCCAAAAGTCTGACAGCAGCTTTTACTTCGAATCTGGTGATTGGAGAGTCCTGTGGGATCCATTCTACAGTCGGTATTACTTCTATAACATCTTGACACAGGAGTCTACATGGTATCCTCCTCACGGATTGGAGGATTTTGCATCACATTCTAACACATGTATACCTGAAGACCTGGACGAATTTGGCTCACAAAATAAAAGCACACCGGCACAAGAACATGATCAGGCTGGTGGTGACAAGCATTTGGATGAGCAGGGGCAAGCTTGTTACAGTGAATTGAGCAATTTATCAGATATTCCTGATGGAGAGAGAATAAATCAATGTATGGTAACTTTCACCGATGAAGCACGCCACACTGATAATATTCATCATCAGAATGATAGTTCAATGAGTGAAATTTCAGAGATGAATCAGGAGATTGGTCGTACCAAAAAGAAAAAGAGAGTAAGGAGATCTAAGTCATATCATTCATGTCAAGACTTGGCAGGGAACATCTCCAATGACATTGCCAAGTACTGGGCTCAGCGGTATTCACTTTTCTCCCTTTTTGATAGTGGTATAAAAATGGATGAAGAAGGATGGTTTTCAGTGACACCAGAGCTCATCGCAAAGCATCATGCATCTCGCGTTGGTGCCGGCATTGTGATTGACTGTTTCACAGGAGTTGGCGGAAATGCCATCCATTTTGCCAACAAGTGCAGGCATGTTATCGCTATTGATATTGATCCACAAAAGATTGATTGCGCGCAGCATAATGCAACTGTCTATGGAGTACATGATCATATAGACTTCGTTAGAGGTGATTTTATTCATGTGGCGCCTCGTCTGAAGGGAGAAACTGTTTTTATGTCGCCTCCTTGGGGTGGACCAGACTATGCCAAAGTAGATGTATATGATATCAAAACCATGCTTAAGCCTTGTGATGGGTATTCTCTCTTTAAACTTGGTACATCGATCGCTTCGAGGGTGGTGATGTTTCTTCCTCGTAACATTGACCAAAATCAATTGGCAGACATGTGCCTGTCAGTTGATCCTCCTTGGGCAGTTGAGGTAGAGAAGAATTTCCTCAATGGGAAGCTGAAAGCCATAACAGCATATTTTGAGCAGCAGGATGGTTCAGATGTGCAGGACGCTAGTGATACAAACCCCCAAAACCCAGAATACCATGCTTAG</cdnaseq>

Protein Sequence

<aaseq>MPGDAEDLPPAITKLGRHFRLTEAHIWDGWYAAGADVSHRSWRSDDIDSGGCCQTDKVQNKPTKQTDEGDLFVEDLELSNLMGSLGLPVSFSTSKEKKNAPNKVKKNGRRVSYEAANTLIDDDSRTCTGTKETESIVQLMACVEQTNPCSSSRITVGYNEVCQGDIEKMDKDIVYANEQEESGDLCSSKVLSSSKAEDNYEHETCQFHANMNNPVKADSPVRENETAEVVLQLNKEMLGQNSVDNESRFSSAEICMEGGLSTIKDQLSGETPSTSHDNKDVDHETCLSSAEPSPVDNNPAQKSDSSFYFESGDWRVLWDPFYSRYYFYNILTQESTWYPPHGLEDFASHSNTCIPEDLDEFGSQNKSTPAQEHDQAGGDKHLDEQGQACYSELSNLSDIPDGERINQCMVTFTDEARHTDNIHHQNDSSMSEISEMNQEIGRTKKKKRVRRSKSYHSCQDLAGNISNDIAKYWAQRYSLFSLFDSGIKMDEEGWFSVTPELIAKHHASRVGAGIVIDCFTGVGGNAIHFANKCRHVIAIDIDPQKIDCAQHNATVYGVHDHIDFVRGDFIHVAPRLKGETVFMSPPWGGPDYAKVDVYDIKTMLKPCDGYSLFKLGTSIASRVVMFLPRNIDQNQLADMCLSVDPPWAVEVEKNFLNGKLKAITAYFEQQDGSDVQDASDTNPQNPEYHA</aaseq>

Gene Sequence

<dnaseqindica>1..80#232..301#1706..1760#1989..2071#2149..2980#3314..3416#3489..3628#3779..4010#4335..4470#5340..5434#5513..5636#5822..5944#ATGCCGGGGGACGCGGAGGACCTGCCGCCGGCGATAACGAAGCTGGGGCGGCACTTCAGGCTCACGGAAGCGCACATCTGGTAAGCCCCTCTCCCGCCGGAGCTCTCCTCCTCTCCAGCCCAGCTTGGTTGTTCGGATTTTGTAGGGTTTCGGCATCTCCTCTGTTTTCTACAACTTAATTTGATGATGATGATGTTGTTGTTGTTGTTGTTGTTGATTCGGTCGCTGCAGGGATGGCTGGTACGCCGCTGGCGCCGACGTGAGCCACAGGAGCTGGCGCTCCGATGATATCGATTCCGGCGTAAGATTCCTATATTTCGTCTTGTGCTTCTTCGGATTCGGATGGTTTGCCTTGCGTTGAGCGTTGTCAAAATGAGGCTTATACGCTTCGTAAGCTTGTCCGGTGTTTGACTAACATTGCTGAGTAATTAGTTTGTTAGAACAAATATGGAGGTTTTTGTTAATCTTTGGTCATTTTGAGGTGTGGGTAAATTAGATGGATGGACTAGAACATACTTGAAATTCACCAGCGGAAAATCTCAGCTGCAGGAGGAACACGTCTACTGAATACTTCTTCAGTGAACTTCTAGTCAACACAATAAATTTGCTTTGCATTTGTAAATATTGGACCCTGTTTTACTTTTTTGGGAAAGTATTATTGGAGGTTTGCTCCAAAAGAGTGTTTTGTTATGTTAAGTTTGCCCAACAATATTTAGCATAGCAATAGCATATATCACACTTTGTAGGTTGTAGAGAGGGTGGATAAGCATGATAAAGGTTCACCTAATTTTAATAGGGGATGAATATGAACATTGCAAAAGGGTTCAGCTTGGTGAGTGAGACAATAAACATATGCTCTAGAAGTACTATACAATTATTTGCTTACTAATACGGTGCTGCATGCAACACTTTGAATTATGGTAGGACACATAACTCCTAGACTCTTATAGCACTGTTTCATGAGCAATATTGGTGAAATTTAGTTATGTCCTTGCTAATTATCTCCATTTTTAGTCTTTACTGCTAGTAATATTTGAGTTGCTGGTGGTTCTGGCTTCACCTTGAAGAGCTTGCATCAGTTAAACATTGTATGCATATATGTGTGACCTGGATGATTTTTTGTGAAACATGGAACTATCTATATCTTGTGCGTATGACTCATTGACTCATGACATTATTCCCTATGGCTTTTATATAGGATGTATGAAGTTTTCCAATTTAAGGATAATTATTTGTGCATGGTGGATAATCTCTTATGATTGCTTTAGTTTTTTGGGGGAGGGAAAATGGAATTTTAAGACGCACATCTACATGGGGAACTCAAAGTTTTGTTTGTTCTTGACAACTTTTTGAATCATTTACAGAAGATTAGTTGTGATCCACTTAGCTAATGCATTGATTTCTGATAGCAATAGTTCATTGTTGATCTAAACATTAATGGCTGGCCTTGCACTTGAATTTCTGGGAAGACCAGTCAGTGAACTGTGTCATGGCTAGAATAGAATACCATCAGGATACAATTGGTTAAATATTACATGTATTTGTCATATGAGCCTTTTATCTTTTTTTTTCCTGACAAATTTTCAAGTCTTTTATTTAAGTGGAACAATTCAAAATATTTAAAATTTTAAATGCTTTGAGATTTGTGTCATGTTGATTTTTAGCTTGTTGTTTATAAGCAATTTGAGAACCTTCAATTGTGCAGGGCTGTTGTCAAACAGATAAAGTCCAAAACAAGCCAACCAAACAGACAGATGAAGGTAATATGTATTCCTTTGCAATCCATTAATTTATTTACACGCTTGTTGTTTTCTGTAATCTCCCTGCTTGTACTATCAGCTTGCATTATAACTCTTGCACTTCCCACACACAGCATAAAAAAAATAATAAAAGATCATTATTTCATAATATAGTGTTAATTTTGTAAGTTTGCAGCAATTTCTTATGATATTGTTTCTGTGTTTGTGATGCTTCTATGGTATCAATAGGCGATTTGTTTGTTGAAGATTTAGAATTGTCCAACCTGATGGGTTCTTTGGGGCTTCCTGTTTCATTCAGCACAAGTAAAGAGGTAAGTGCTCACTGCACTACTTCACTCTCGACTGCTCCCCAGATGATTAATCTGTAGCTCACCCTTCGTCATTATAGAAAAAGAATGCACCCAATAAGGTAAAGAAGAATGGAAGGAGAGTCTCCTACGAAGCAGCAAATACTCTAATCGACGATGATTCAAGGACATGCACGGGTACTAAAGAAACTGAAAGTATTGTTCAGTTGATGGCTTGTGTGGAGCAAACTAACCCATGCAGTTCATCTAGGATCACTGTGGGTTACAATGAAGTCTGCCAAGGTGATATCGAGAAGATGGACAAAGACATTGTTTATGCTAATGAACAGGAAGAGTCTGGTGATCTCTGCTCTTCTAAAGTATTATCAAGTAGCAAAGCTGAAGATAACTATGAACATGAGACTTGTCAGTTTCATGCTAACATGAACAACCCAGTAAAAGCAGATTCTCCTGTTCGAGAAAATGAAACTGCAGAAGTTGTCTTGCAATTGAACAAGGAGATGCTGGGGCAAAACTCTGTTGATAATGAATCTAGATTCTCCTCTGCTGAGATTTGTATGGAAGGAGGATTATCAACAATAAAAGATCAACTATCTGGGGAAACTCCTTCAACATCCCATGATAATAAGGATGTTGATCATGAAACTTGTCTAAGTTCAGCAGAGCCATCACCTGTGGATAATAATCCTGCCCAAAAGTCTGACAGCAGCTTTTACTTCGAATCTGGTGATTGGAGAGTCCTGTGGGATCCATTCTACAGTCGGTATTACTTCTATAACATCTTGACACAGGAGTCTACATGGTATCCTCCTCACGGATTGGAGGATTTTGCATCACATTCTAACACATGTATACCTGAAGACCTGGACGAATTTGGCTCACAAAATAAAAGCACACCGGCACAAGAACATGGTAAGAGTCCTTAACGGTTTGATCCGTCATCTGATGTTGTGTGCCCTCAAAGTTTCAGTATATTTTTTTATGTTGATAATTGCAACAACCTGGATTGTTAACATGGCATTTTTCTGGCACTAACATTTCCAGAGATTTCCTGCCTGTAGTTGCAAGTTCTGCACTATTATGTTCCTGCTTGTAGTTGCAAAATAGTTCTGCATTTTTATACTTGCTCGATTAATTTTCTTGGATTTTCTCATAGGCATGAATGCATGATCTCCTATTCCCATCAACATTGTTCGTACTTCTATTTTCTTTAGTATCATACATTTTCCTTTTATCTCTGATCAGATCAGGCTGGTGGTGACAAGCATTTGGATGAGCAGGGGCAAGCTTGTTACAGTGAATTGAGCAATTTATCAGATATTCCTGATGGAGAGAGAATAAATCAATGGTATGTTGGATCATATCAAATAATACTTCCTTGACATAATCTATTTCTTGTTAATATCCGTTCTCTATGCAGTATGGTAACTTTCACCGATGAAGCACGCCACACTGATAATATTCATCATCAGAATGATAGTTCAATGAGTGAAATTTCAGAGATGAATCAGGAGATTGGTCGTACCAAAAAGAAAAAGAGAGTAAGGAGATCTAAGTCATGTAAGATATTCAGCTTCAGCCTTGTAGGAGTTGTCGTACCTGATACCTTTTAAGATGATTCTACCGAATGTCGTGCAAATGTTTATCATAGCTATGGCTGCTAATCTTCGGTTTATTTATCTCTGAATAACCATTTCTGTTATTCCACAGATCATTCATGTCAAGACTTGGCAGGGAACATCTCCAATGACATTGCCAAGTACTGGGCTCAGCGGTATTCACTTTTCTCCCTTTTTGATAGTGGTATAAAAATGGATGAAGAAGGATGGTTTTCAGTGACACCAGAGCTCATCGCAAAGCATCATGCATCTCGCGTTGGTGCCGGCATTGTGATTGACTGTTTCACAGGAGTTGGCGGAAATGCCATCCATTTTGCCAACAAGTGCGTTACTGTTATCACATTTTCATGCATTCTTTTTACATGTGAATAATTTGTTAACTTGAGACTCTTTACATGGAACTGCATTTCCGGGCTTACATTATGAGAATGTTAACAGTTTGGCCTGAATATTTTCTTAAATATTTATTCATGTTTGCATAGAGCACAGTGCACACTGTGGCACAAAGATATAACCATTTGGGGAATATTTTTTTTGTTGAATTTGGTGCCACTGCCTATTCACAATCATGTTTGGATAGGGGAATCCTCTGTTTCTTGATGCAGCTCCAACTACATGGTTTTACATTAGTAACACCATTTTTTCAGGTGCAGGCATGTTATCGCTATTGATATTGATCCACAAAAGATTGATTGCGCGCAGCATAATGCAACTGTCTATGGAGTACATGATCATATAGACTTCGTTAGAGGTGATTTTATTCATGTGGCGCCTCGTCTGAAGGTACATCTTAATACTCTTATCTATTAAAAATCTTTTCATCTTTAATCTTACGTTTGTGGATTTGTTGTTTCCTTTAGTTACCCATTTTCATAGTTTCCTATGAAATTGCATTATTACTATGATTATGCTTGCATGTGCCCATCCATGTGCATGGGTGGCATTTTCTGGATGTGTTAAATATGTTAGGTACAAAATGAATTTCTGTTTTATCAATAACCAAATTAATTCCAAGTTTTGTGAGAATCCTTCTTTGTATAATCCCCATGAAACTGGCACTTGGCTAGGAGTACAATTGGATTGGTCATTGTCATACTCATACACCTCTCGTTCTGTATCCTATTCCATACCTCTGGTTTCTAGTCAAAAGCTGGTAGTGCCCGACAAGAATATAGATGCAGGTTGTATTTGTCGTGAATAAGGAAGTGGATACATGTAGTACTGCAATAAATATGTTCAGATGTGACACGAAATCAGAGATTGCATTTTAACTACCCAACCCTTTCCCATATTTTGGCTCTATGCACCACCATAAACTCTTACTGTAATATATATGACCTACAGGTTGCTACCTAGCAGAAAGTTTTTGCACCAAGCTCTTCACTAGTTCTAGAACGCATATAAACGTGGAATCCATATGCACATTTGATTATATGTCATCTGGGCATTTCACCAAATTCCTGATGTGGATCTAGAGATCTGGTCACCAACGATCCCTGGCCTTGATCTGGAACTGCTTGACAGTAACATCCTTTGTTCACATGCTAAACTCTGACAGGACGATGAGGAATATCTTCCTTTGTTCACATGCCTGTTGTTTTCTTGCATTAGTTGGTTTAATATGCTTACTGTGGGTGAACTGTTTTACACAGGGAGAAACTGTTTTTATGTCGCCTCCTTGGGGTGGACCAGACTATGCCAAAGTAGATGTATATGATATCAAAACCATGCTTAAGCCTTGTGATGGGTTAGTTCCTTCTTCCAGAGTAGTCTGTTTATCGTTCCATTCACAGATGTTGACAAGCTCTGGTTGGATTTTTTTCAGGTATTCTCTCTTTAAACTTGGTACATCGATCGCTTCGAGGGTGGTGATGTTTCTTCCTCGTAACATTGACCAAAATCAATTGGCAGACATGTGCCTGTCAGTTGATCCTCCTTGGGCAGTTGAGGTATATCCATTTCCTGTGATTTGTGTATAGCTGACTTGGCCACAAAAGAAGGGTTGATGCACTTGTGGAGCTTAATTGTTTATCCATGGTCTTTTCTTCTGATGCACTTACTTGTGGAACTTAATTGTTTATCCATGGTCTTTTCTTCTGATGCTAAGTGGTCTTTTCCTATTACTTTCTGGCAGGTAGAGAAGAATTTCCTCAATGGGAAGCTGAAAGCCATAACAGCATATTTTGAGCAGCAGGATGGTTCAGATGTGCAGGACGCTAGTGATACAAACCCCCAAAACCCAGAATACCATGCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012807