Os12g0467200

From RiceWiki
Revision as of 10:29, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0467200| Description = Protein of unknown function DUF1677, Oryza sativa family protein| Version = NM_001073278.1 GI:115488517 GeneID:435219...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0467200

Description

Protein of unknown function DUF1677, Oryza sativa family protein

Version

NM_001073278.1 GI:115488517 GeneID:4352192

Length

2662 bp

Definition

Oryza sativa Japonica Group Os12g0467200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:16730759..16733420

Sequence Coding Region

16731809..16733035

Expression

GEO Profiles:Os12g0467200

Genome Context

<gbrowseImage1> name=NC_008405:16730759..16733420 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:16730759..16733420 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgacgccggacaagaagaggaggaagaaactcgcggagccggagccgacgccgacgccggcgccggagccggtacctcgtctcctccgcgttcgtccagggaacaagaagaagaacaagggggcctcacctgagaagcagccgccggtgtacatggtgttggcgcacggagtcgaggaagagcccaccacccactccgtaatcgaggtcgccgcctgcgccgccgcccgccgcctgcttaacaccggcagcggccgcggccgcggccgcggcatgtcgttcgccgcggtggggacacgcaccgtgggcgtcggcgtggagttgaccaccgtctacgaccccgagacatccacggagcgcggcggcccgcgactcatcttccccaaggtgaaccccgtcctcatctcgatctctgacgacggcggcggtgtagtcggcggcggcacgctctacgctctctcccgcaccccggccgtcgtgaggccgctggatttcgagccatggttcttcgtcctcgacgacctcagccacaccgtgtggcgcgaactcccatcgccgccgctcttcccgtgccgcctcaacccgctggagttcctcgacccgcccaagttgcgcgtcgcggcgtacgccctcgtcggctcccacatcctcctgtcggtctcggtgcagcagctgcagccgcagcagcagcaagaagacaagggcacctgcgccttcgacatggacaccgagcagtgggagatggtgcacgacagcaacctgcctttcgacggccaggccttgcctctcggcagcgacgacgaccaccgcttcgtcgccgtcgcctccgccgccgccgacgttacggtgtaccgcatggtggtcgggatctcggccgtcacggggaagaaggagctgaccatcgttgcgttgcgggtggtggtggcatccaactccaagtgccgcattgttccgggcaaccttctgtgcgccatggggaaggggagcttcgcttctttcgagttccggtccattgctgctgcttccatgggaaaggtgggcagagcacgtattgttcatcgcacttactctctggtggatgatggtgaggacgattgggtcgtcatggtgaagaagcaggatcggcaggtttacaagctacgtgatccatccttcttgggcggttgctcttttttccatgtaaaaatttcagagcctttctttgcttcttccaacatcttctga</cdnaseq>

Protein Sequence

<aaseq>MVTPDKKRRKKLAEPEPTPTPAPEPVPRLLRVRPGNKKKNKGAS PEKQPPVYMVLAHGVEEEPTTHSVIEVAACAAARRLLNTGSGRGRGRGMSFAAVGTRT VGVGVELTTVYDPETSTERGGPRLIFPKVNPVLISISDDGGGVVGGGTLYALSRTPAV VRPLDFEPWFFVLDDLSHTVWRELPSPPLFPCRLNPLEFLDPPKLRVAAYALVGSHIL LSVSVQQLQPQQQQEDKGTCAFDMDTEQWEMVHDSNLPFDGQALPLGSDDDHRFVAVA SAAADVTVYRMVVGISAVTGKKELTIVALRVVVASNSKCRIVPGNLLCAMGKGSFASF EFRSIAAASMGKVGRARIVHRTYSLVDDGEDDWVVMVKKQDRQVYKLRDPSFLGGCSF FHVKISEPFFASSNIF</aaseq>

Gene Sequence

<dnaseqindica>1051..2277#gactctttctccgttcgcatctggcgcactgccgcgatgtcatcgctaagtcctgatgccgtgtcgccgtcgctacctagaactgagaaactggtgctggctgtgacccatcattggccggcctgcctgccggagtccttgtcggctgcaacgcctgacggcctgatcgtctactctaatcagcaatcaggtaatgtaatccactaatccctattctctaattttagtgtatcatgtatggattattaggtttttaggctcatctactatatacactaaatcaatttttatccttacatagatacatcctgtattttaattttgaagacatgtcttcaacaaattggaataggaaatatactatgcacatgtatattattttagaccattttacattgctatgaaatgtattatagagtataaattattgttgtattatatcatcaattaagtttttattcttctttactactgcacgactttgcactggggcctcaaatttaataggatagccctggttctggagaagagtagacggtgcggtggagagaaggaggaagagaaaaaaggtgcagaaaaaaaatctatttcctacttgcccgcatgcaaaattagtttttttacatgcagtccttaagaagcctttgatccatctctcgggttaacttttttttttcatgcgtgaacagttatggtctatacctgtaatttggagggatgtcgtcctcgtttctgtagtagttgtagaagtgagcatgcttaaaaaccagaaaaaagaacgcagcaatgctatcattcgcctgttgcactcgcaatcgaacgttccaaaaagaaaaaaaaaatcctgattgcgacggggagtttagtagtaggtgagacgcatgttgcactgccttggcggcccagtctcaagtagtggagttgtaacatttggcccagtctcggctaggcccatgctgtcctccggccgacgaaagcaaccccactgggatagggtttcctttcatcacgtctttgatacgtaaatccgaatccagtcgagggaagaagatggtgacgccggacaagaagaggaggaagaaactcgcggagccggagccgacgccgacgccggcgccggagccggtacctcgtctcctccgcgttcgtccagggaacaagaagaagaacaagggggcctcacctgagaagcagccgccggtgtacatggtgttggcgcacggagtcgaggaagagcccaccacccactccgtaatcgaggtcgccgcctgcgccgccgcccgccgcctgcttaacaccggcagcggccgcggccgcggccgcggcatgtcgttcgccgcggtggggacacgcaccgtgggcgtcggcgtggagttgaccaccgtctacgaccccgagacatccacggagcgcggcggcccgcgactcatcttccccaaggtgaaccccgtcctcatctcgatctctgacgacggcggcggtgtagtcggcggcggcacgctctacgctctctcccgcaccccggccgtcgtgaggccgctggatttcgagccatggttcttcgtcctcgacgacctcagccacaccgtgtggcgcgaactcccatcgccgccgctcttcccgtgccgcctcaacccgctggagttcctcgacccgcccaagttgcgcgtcgcggcgtacgccctcgtcggctcccacatcctcctgtcggtctcggtgcagcagctgcagccgcagcagcagcaagaagacaagggcacctgcgccttcgacatggacaccgagcagtgggagatggtgcacgacagcaacctgcctttcgacggccaggccttgcctctcggcagcgacgacgaccaccgcttcgtcgccgtcgcctccgccgccgccgacgttacggtgtaccgcatggtggtcgggatctcggccgtcacggggaagaaggagctgaccatcgttgcgttgcgggtggtggtggcatccaactccaagtgccgcattgttccgggcaaccttctgtgcgccatggggaaggggagcttcgcttctttcgagttccggtccattgctgctgcttccatgggaaaggtgggcagagcacgtattgttcatcgcacttactctctggtggatgatggtgaggacgattgggtcgtcatggtgaagaagcaggatcggcaggtttacaagctacgtgatccatccttcttgggcggttgctcttttttccatgtaaaaatttcagagcctttctttgcttcttccaacatcttctgattcgttgtcagcgtctattatatcgctgctaaggccttgtttagttgggaaaaaattttgggtttggttgtcacatcagatataccgacacacatttaagtattaaacgtagtctaataacaaaacaaattacagatttcgcagagatgaatttattaagcctaattaatccgtcattagcaaatatttactgtaacaccattgtcaaatcatggtgcaattaggcttaaaagattcgtctagcaatttacacgcaatctgtgtaattgtttcttttccatacattaaatgctccatgcatgtgtccaaatattcgatgtgacagtgtaaaaaattttgttttggaaactaaacagggcctaattcatcagcagctatcctttcg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0467200, RefSeq:Os12g0467200