BGIOSGA012834

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Revision as of 09:53, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012834| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012834, complete gene.| tag = OsI_119...")
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Gene Name

BGIOSGA012834

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012834, complete gene.

LocusTag

OsI_11972

Ensembl Transcript ID

BGIOSGA012834-TA

Ensembl Protein ID

BGIOSGA012834-PA

Length

5439

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:18450887..18456325

Sequence Coding Region

18450887..18451136,18452293..18452382,18452726..18452859,18452951..18453121,18453317..18453439
,18453515..18453594,18454818..18455109,18455271..18455367,18455456..18455630
,18455752..18455908,18456023..18456089,18456183..18456325

Genome Context

<gbrowseImage1> name=IndicaChromosome03:18450887..18456325 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:18450887..18456325 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGGCGGCGGGAGGCGGCGACGGGAGATGGTGCGTGGTGACGGGCGGCCGCGGCTTCGCGGCGAGGCACCTGGTGGCGATGCTGCTACGCTCCGGCGAGTGGCTGGTGCGCGTGGCCGACCTGCCCCCCGCCATCGCGCTCGACCGCGACGAGGAGGAGGGGATCCTAGGCGCCGCCCTGCGGGAGGGCCGGGCTGCCTACGCCTCCGCGGACCTCCGCAACAAGGCCCAGGTGGCCGCAGCTTTTGAGGGGGCTGAAGTTGTTTTCCACATGGCTGCACCAGATTCGTCTATCAACAACTTTCACCTTCATTATTCAGTTAATGTTGAGGGAACAAAGAATGTCATTGACGCTTGCATCCGTTGCAAGGTGAAGAGACTTATCTACACCAGTTCACCAAGTGTAGTTTTCGATGGAATTCATGGAATCTTTGATGCAGATGAATCAATGCCTTACCCAGACAAGTTTAATGATTCATATTCAGAAACAAAGGCAGATGCAGAAAAGTTGGTCATGAAGGCTAATGGTAGGGATGGGCTTCTTACTTGTTGTATACGCCCAAGTAGCATTTTTGGCCCTGGTGATAAGCTACTGGTTCCTTCTCTGGTTACTGCTGCAAGGGCAGGAAAGTCTAAGTACATTATTGGTGATGGGAGCAACTACTATGATTTCACCTATGTGGAGAATGTGGCATATGGCCATGTTTGTGCAGAGAAAACTCTATCATCTGAAGATGGTGCAAAGAGAGCTGCTGGAAAAACCTATTTCATAACAAATATGGAGGCTATAAAATTCTGGGAGTTCATGTCGTTGATTTTGGAAGGACTCGGATATGAAAGGATGAGTTTGAGGATGGACAGTGAAGGATACATCTTATACATACATGAGTTTATCAATTACCATTGTACTAATGCATTAGAACTTTGTGGCAGGCCTTCAATAAAAATACCAGTTTCTGTTATGATGCCAGTGGCTCATATGGTAGAATGGACTTATAAGACGTTCGCTCGCTATGGAATGAAAATTCCTCAGCTTACTCCTTCAAGGATCCGGCTCCTGTCTTGCAATAGAACATTCAGCTGCTCAAGAGCAAAAGATGAGCTTGGTTATGAACCCATTGTGTCACTCAAGGATGGACTTAAGAGAACAATAGAGTCATATCCCCATCTGCAAGCACAAAATCAAAGGAGCATATCAAAAGCCTCAATTTTCCTTGGCAATGGAAATCTTGCGAAGACAGTTCTCTGGGAAGACATGAAGCAAACAATGACTGTACTACTGCTACTGGCTGTTATCTACTATCATTTATTTACATGTGGTTACACCTTCATTACAGCAATGGCAAAGCTTTTCTCACTAACCGCACTGTTTTTATTCATTCATGGGATTCTGCCTGCAAATGTGTTTGGACACAAGGTTGAGAAGCTCGAGCCTTCAAATTTTCACATCACACAGGTGGAGGCGCATCATATTGCTCATTCAGTCAGCTCAACATGGAACTCTTTAGTTGGTGTGCTAAAATCTTTATGCAGAGGAAATGATTGGCCACTATTTTTCAAGGTGGTATTCTCCCTATTGGTTGTGAGCATCCTTAGTTCCATGTCTTCGCAATCTGCATTTAAAATAGGTATTTCTATGGCTTTCCTAGGCTTCAAAGCCTATGAGAAATGGGAGGACACCATCGATGATTTGGTGGGTAATGCATGCTCGGTTGTTACGCACTTTGTTCAGGGCCAGAAATCCTCAAGGCAGAAGCATGCAGATAATTGA</cdnaseq>

Protein Sequence

<aaseq>MAAAAAGGGDGRWCVVTGGRGFAARHLVAMLLRSGEWLVRVADLPPAIALDRDEEEGILGAALREGRAAYASADLRNKAQVAAAFEGAEVVFHMAAPDSSINNFHLHYSVNVEGTKNVIDACIRCKVKRLIYTSSPSVVFDGIHGIFDADESMPYPDKFNDSYSETKADAEKLVMKANGRDGLLTCCIRPSSIFGPGDKLLVPSLVTAARAGKSKYIIGDGSNYYDFTYVENVAYGHVCAEKTLSSEDGAKRAAGKTYFITNMEAIKFWEFMSLILEGLGYERMSLRMDSEGYILYIHEFINYHCTNALELCGRPSIKIPVSVMMPVAHMVEWTYKTFARYGMKIPQLTPSRIRLLSCNRTFSCSRAKDELGYEPIVSLKDGLKRTIESYPHLQAQNQRSISKASIFLGNGNLAKTVLWEDMKQTMTVLLLLAVIYYHLFTCGYTFITAMAKLFSLTALFLFIHGILPANVFGHKVEKLEPSNFHITQVEAHHIAHSVSSTWNSLVGVLKSLCRGNDWPLFFKVVFSLLVVSILSSMSSQSAFKIGISMAFLGFKAYEKWEDTIDDLVGNACSVVTHFVQGQKSSRQKHADN</aaseq>

Gene Sequence

<dnaseqindica>1..250#1407..1496#1840..1973#2065..2235#2431..2553#2629..2708#3932..4223#4385..4481#4570..4744#4866..5022#5137..5203#5297..5439#ATGGCGGCGGCGGCGGCGGGAGGCGGCGACGGGAGATGGTGCGTGGTGACGGGCGGCCGCGGCTTCGCGGCGAGGCACCTGGTGGCGATGCTGCTACGCTCCGGCGAGTGGCTGGTGCGCGTGGCCGACCTGCCCCCCGCCATCGCGCTCGACCGCGACGAGGAGGAGGGGATCCTAGGCGCCGCCCTGCGGGAGGGCCGGGCTGCCTACGCCTCCGCGGACCTCCGCAACAAGGCCCAGGTGGCCGCAGGTGCGTGTCATCTCCCCGTTTTCGCTTCCCCCAGATCGCTGCGCGGGTAGGTTTTTGGTTGTGGTTGGTGATGTGTTTGATTCGTACTTACTGGGGTAAAAGGTCAGAGTACGGCGTGTCACACGAGCGTATCGGCTAGACATGGCCAGCGTGATTTAGTTGGCAATCCAGATCGAGCCCGAATTCATTTTGTCGAAATATCCATTCAGTTCGATGTGTTGGTATGCTGGGACTGATCCTAGTTTCATCATACCTATATTGAAAGTACATGATGTTAGTGTCATTGTTGCCAATGCACTCTATTAGCTTGACATTGTATTTGTTGCAATGGCACACTGACTGGAACTAATTAAATAGTTGTTCCAATGAGGGTCTCTCCTGATATGGATTCAAGAAGTGGTGGTACCAGACCAGCAATTAAGGTCTGTTTGCATTGCGATGGATTATGATAATCTCGTTTGGTGCAATAGCTTTTAGACAGTTTGGTGTTTGGCAAACAATAATACTGTCATGTTCCAAAAATGTGAAATAATTGGGAGAGACATGAGTTAGATAACATGTTTTCTATAACCTTAATTTGATCTGTATAATGAAGTATAAACATTTCAAGTTTTAATTTTTGTAGCAACTTAGAACATAAGTACAACGCAGCACAGCACAGCGTAGCAAGCACAAACTGAGCCTAATTATGGAGTTTCTGCTGCCTACTTAATGTTTCTTACTGTGTAACTAGAACTGCGATTGTCCTAGAGGGGCTTGGTCAGCTGACATTTATTCATTTCCTTGAAATGGCTAGGGAAAAAAAGTCTCATATTATGCTGCATATCTGAGGGGGGGGGGGAAAGATAATATGTATTGGGGACTCCTGTAACTTGTCTGTTGATTTACTTTCACACATCTTCTGTTACTTACAATTTTATAGTTATCTAGTTTGTTAATTTCCTGCGGTCTTTCCACTAGGTTCTGTCATCCTGATACTTGTGTTTTTTAAGTTACTACCTCTGGCCACTAAAGGAAAATTGATGTTTTGTGTATTGACATAACCTCCAAAACACACATTGACCCACTACTTTATTCTTTAGAGCCGAATAAAATAGTGTGACATTACTCAATTTCATTGTTTGATGTCCAATGCATATATATTCTTAATGTGCAGCTTTTGAGGGGGCTGAAGTTGTTTTCCACATGGCTGCACCAGATTCGTCTATCAACAACTTTCACCTTCATTATTCAGTTAATGTTGAGGGTTGGTACTTCTAACTTGTATGCCATGCAGCTTTGGTTCTTAATTATCATTGTACAGATTGTTGTTTATGAGATATCGATCCAGTTATTTTTATTTTCAATAAATATCTATAACATGGAGGATTTGCCACTCATGTGACACTGACATGTGGGACCAGGATACACATGTCAGTGAGACATGGTGTGGTAAATCATTTTCTAATCATTAATAATCATTTTCAATAAATATCAATTTTTTTCAATATTAGTAACATTAATTTTGGATTATTTTTTCTAATCATTTTCAATGATATAGTACTGCATTAAAGTTTGTCTATGTGAGACTTGTACAATGCATTTCACAGGAACAAAGAATGTCATTGACGCTTGCATCCGTTGCAAGGTGAAGAGACTTATCTACACCAGTTCACCAAGTGTAGTTTTCGATGGAATTCATGGAATCTTTGATGCAGATGAATCAATGCCTTACCCAGACAAGGTCTTCCTATTTTTCATGGATTACATTCTTGTGATTTGTCATTGCTTCATCTTTATCCCATATTTCCTAACAAGAGCTTTTCTTACTTCAGTTTAATGATTCATATTCAGAAACAAAGGCAGATGCAGAAAAGTTGGTCATGAAGGCTAATGGTAGGGATGGGCTTCTTACTTGTTGTATACGCCCAAGTAGCATTTTTGGCCCTGGTGATAAGCTACTGGTTCCTTCTCTGGTTACTGCTGCAAGGGCAGGAAAGTCTAAGGTAAGAATGGCTTGCATGTCTGTAAACATTGGTATGCTAGGTTTGATCTCATTTCTCGTTGTCCATGTTCACATGTTGATATGGACTATTTCAATATTGTAGGATCAGAATGCTATTTATAAGTAGCAAAAATAATATCGAACAAACTAACACTTGAATTACTTTTTTATGCTTGTTCCAAAATTTCATCGCTAGTACATTATTGGTGATGGGAGCAACTACTATGATTTCACCTATGTGGAGAATGTGGCATATGGCCATGTTTGTGCAGAGAAAACTCTATCATCTGAAGATGGTGCAAAGAGAGCTGCTGGAAAAGTATGGTCCCTTCTTTGCATTTCACTTTTTAACAACCAGGAGTCCATAATATTATTGTTTTTTATTTGTTTCCAGACCTATTTCATAACAAATATGGAGGCTATAAAATTCTGGGAGTTCATGTCGTTGATTTTGGAAGGACTCGGATATGAAAGGTATTGATTTGAAAATACAAATGGTCTTCTACATGCTTAGATTTATTTTCTGAGGAACATTATTGATAGTGTCTTAGTATGCTGTACCATAATTAGGCCCTGTTTGATTTAGCTTAAGATTATTATAATCCAGATTATTAGCAGTAATATGAAACAAACAGATAGATTATTATAATCTAGAACCCAGATTACTATAATCTGATAATCTCCTCCAAAGGTGCTTTTTTTTCAGATAAAAGGAAATAGTGCACTGTGGACATTCACTGAATTATGCTTTGTAGTTTTAGAGGTTATGTCAAAACTATCAGTTTTCTACAACTTCATCAGGGTATGACAATAGAACATGACAGCTTCTTTACTACTCGGGCAGTTTGGCAGGCTGTGTCCCCCTTTAATACACTAATGCAGTGTTCACCTTTACACCATTAAAGGGGGTGTTTTGATGGTCTGAGTTTGTGTCACGTGCTAGAATTATTTGGGATGAAACGGGTTGAAGGGGAATAAACTGGATCATAATAGAGGAAATAACAAGGAATGGCCCTAAACCTAAACAGCGTGATGCTCTCCGTCGCACTGAGAAGGCAGGGCCGATGGGCACTAAGATAAATCTTGATCTAATGCCTATCCTGATCCAGGCTAGGTCCCTCCTTATATAGATGGAGAGGAATTCCTAATCTAATCCCTATCCTAACAGACTCTATCCAACTGAGCTACAACTGAGCTCCTCAATCCTATCCAACTAAACTACGTACTTACCGCAAGGGGTTCCAATTGGGCCTAGGAGTTCCGGCCCAATGCCCATTACAGTTTGGCACCATGCTCGTGAAGGATGGACCTGTCTTATGGAGTTGCAGTGTTCTGATAAATCATTCACTAACATTGTATTTTTCTCGAACTCCTAGTATAGTATCAGCAAGCTGGTATTTTTGATGGAAATAATTGCACTTTTTTGAAAAATAATTATTATATAAGTTTGATAGCCTACTGAGATGATTTCTGTTGGTTATGTCATTAGTTTTCTGGAGAGCATTTTAACTGTGTACCAAAATATTAATATCTTAAGGGATGAGGAGCGGAATCATTACAGTTCATTTACTTGATAATTTAGCTTAGCTGGATCTCCTGATTACATGTGCTACTGATATCAAACCGAGTGTTACAGCTCTCAGTAGTATCTGCTGGAGTAGATTTGGTCTTCTGCTATTGTATCTATGTCCCTGCAGGATGAGTTTGAGGATGGACAGTGAAGGATACATCTTATACATACATGAGTTTATCAATTACCATTGTACTAATGCATTAGAACTTTGTGGCAGGCCTTCAATAAAAATACCAGTTTCTGTTATGATGCCAGTGGCTCATATGGTAGAATGGACTTATAAGACGTTCGCTCGCTATGGAATGAAAATTCCTCAGCTTACTCCTTCAAGGATCCGGCTCCTGTCTTGCAATAGAACATTCAGCTGCTCAAGAGCAAAAGATGAGCTTGGTTATGAACCCATTGTGTCACTCAAGGTGTTTATCTGTGATTCATAATGTGATTAGTAATAGCTCTTGATATATTTGTGTGTGTGGTACTGTGGTGGTTTATACCTACTCAATAGCTCTAGATAGTCCATACCTACTTCCCTTCTTGAAGGTTCTCACACATGCAACTGACCAATTCTAAAATTCAGGATGGACTTAAGAGAACAATAGAGTCATATCCCCATCTGCAAGCACAAAATCAAAGGAGCATATCAAAAGCCTCAATTTTCCTTGGCAATGGAAATCGTATGAATATCTCTCACACACACATGCGTGCATGCCCATGCCTTCACACCCTTCTTGAGATTATAATGAATATTGATCTTGGCTGCAGTTGCGAAGACAGTTCTCTGGGAAGACATGAAGCAAACAATGACTGTACTACTGCTACTGGCTGTTATCTACTATCATTTATTTACATGTGGTTACACCTTCATTACAGCAATGGCAAAGCTTTTCTCACTAACCGCACTGTTTTTATTCATTCATGGGATTCTGCCTGCAAATGTGTATGGTTCTCTGTCATTTTCCCTTTAACTGAATATGCCTATTATCAGCTGGTGAAACACCATCTAGGCTTTTATCCATCTTCTGTTTCCAGATAGTGATTGTTGAATAATACTTATGCAGGTTTGGACACAAGGTTGAGAAGCTCGAGCCTTCAAATTTTCACATCACACAGGTGGAGGCGCATCATATTGCTCATTCAGTCAGCTCAACATGGAACTCTTTAGTTGGTGTGCTAAAATCTTTATGCAGAGGAAATGATTGGCCACTATTTTTCAAGGCATGGCACCTATGTGATATGTCTACATGACTAAATTAGTTTTATAATTATAAATTTCTGAGGACAAAAGTGATGTATTTTTGTGTCCAGTCTCTAACTGCTTGTTCTTGCCAGGTGGTATTCTCCCTATTGGTTGTGAGCATCCTTAGTTCCATGTCTTCGCAATCTGCATTTAAAATAGGTAATTTTAAATACCATGCTTCTCTTTTTGAATCCTGCAAAACAAGGAGCATGAGCACATGACTGATGATGAACTATCTGATGGGGAGAATAGGTATTTCTATGGCTTTCCTAGGCTTCAAAGCCTATGAGAAATGGGAGGACACCATCGATGATTTGGTGGGTAATGCATGCTCGGTTGTTACGCACTTTGTTCAGGGCCAGAAATCCTCAAGGCAGAAGCATGCAGATAATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012834

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA012834&oldid=57657"