BGIOSGA012851

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Revision as of 09:53, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012851| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012851, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA012851

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012851, complete gene.

LocusTag

OSJNBB0108E08.22

Ensembl Transcript ID

BGIOSGA012851-TA

Ensembl Protein ID

BGIOSGA012851-PA

Length

5769

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:18928377..18934145

Sequence Coding Region

18928377..18928415,18929211..18929337,18930064..18930190,18930605..18931170,18931635..18931950
,18932112..18932352,18932473..18932562,18933082..18933519,18933616..18933924
,18934131..18934145

Genome Context

<gbrowseImage1> name=IndicaChromosome03:18928377..18934145 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:18928377..18934145 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCACCCGCGCGCGTCGACCGGTCGGAGATGAGGCAGAACACAAGTCACCAAGGTTCCAATGATCCCAGAGTACAAAAGGAAAGGCAAGCAGAATGGGCCAGACCTGGAAGAGTTTTTAATAGGAACACTAACAAAGGAGGTTACTTTCGGAATTCATTGCCTGGAGTCACTAGGGAGTTTCGTGTTGTGAAAGACAATCGACAGAAGGTAGTTGGTGAGACTATACCAGGATCATTTCATAATGGAGTCCCAAGCAATGAACAGATCGCTTCCAATATTGGAGACAAAAGCTCAACTGAAAAGTTACCTGCACAACGCCATCCGGTTACTCAAAATTCTAATGGACGTGGGGTAGCTCAAGCTGATAATGGACGCAAAGAAGTCAAGCCTTCTAATGACCAAACAGTGGGACAATCTGATGGGATGATTACAACAATGGTTGGTTCACATGCAGTTCTAGCAAAGGGTAATCAGAACAGAGTGCTTGCTGTGCCATCAGGAACAAATAATTTTACTGGTGAACTTTGCTGCTCTTCGTCAGATCCAATACATGTACCCTCTCCTGGTTCTAAATCAGCTGGGACTTTTGGAGCAATAAAGCGTGAGGTTGGAGTAGTTGGTGCTAGGCAACGGCCATCTGATAATACAGCAACAAATACATCCACTTCAAACAGTTCAGTTAAGGTGCCAACAAGTACAGCAACAAAAGAGAATGCTTCAAATGGACAGCAATCTAGATCCTCTGGTGTATCATCGAAAAACTCCCGTCCTAGTTCATCTACACACTTGAGCAGTAGACCATCTTCTTCGAGTCAATATCATTCTAAGCCAAATACTCCTGTTGGTCATCCAAAAGTGAACCCACAATTGGAGTGGAAACCCAAATCAGTAAGCCCCAGTCCTGCCAATCATGCAGATAATGTGGTACATTCTAGTGCTGCATCATCTGTTGATGGTAATCAGGCACACATGGCTGGTTTGTCTAAGAAGCTTTCACAAACTAATGTTTCTGAAGATGAGCATGTCATCATACCTGCACACCTCAGGGTACCAGACTCAGAAAGAACACATCTTATATTTGGTAATTTTGAATGTGATGTTGAGTCGAAGGCTTTTACATTAGCTCCTGATGCTTCAACTAACAGAGAGTTTAATGCCCATTCTTCTTCAAGATCAACTGATGATGTGCCTCCTACTGACCAGACGGATCTTGTTGGCTCTTGTGTCATGCTTCCGAAATCAGATTCCTTTGTTTCAGTTTCCGAATATCAGCACCCATTGACTGAGGACATGGAGGTCTTGAGTCCAGGTGTTTTTGGAGAGCATAGGACAAATGATATGATTTCAACCCAGGTCTCACATTCTTCACCTCAACCCCAGCATCAGGACAATTCAGCAGTGCATGACTTTAAGGAATATGAGCCAGATTCTAGGTATGAGATGCCATTTATCACTAAAGCTGTTGATAGTGAGGCGACCCAAAATATACCTTATCCGTCTGAGGTGATGGGCTTGCATGCTGCAAATTTCAATCAGTTATCTGTTACTGCAGCAACTCAGCACCCAGTGCCTCAAATGTACCACATGCATGTATCGCAATATCCAAACTGCTTGCCATATCGACATGTTTTCTCTCCATACTATGTGCCTCCAGTGGCTGTTCAAAACTATTCAAGCAATCCAGCATTTACACAATTGCCAAGTGCCAGCAGCTATTTGGTAATGCCAAACGGAACGTCACAGCTAGCACCCAATGGCATGAAATATGGACCACCTCATCAGTGTAAGCAAATGTTCCCTGGTGGCCCTGCTGGATACGGTGGTTTTACAAATCAGAATGGTTACCCAGTCAATACTGGTGTAATTGGTGGCACTGGTAGTGTCGAAGATGCCAATATGAGTAAATATAAGGACAACAATCTTTACACACTCAACCCTCAGGCTGAAACAGCAGATGTGTGGATTCAGGCTCCTACAGATATTCCCGTCATGCCGTCAACACCATTCTACAACATGATGGGCCAACCAATGTCTCCCCATACAGCATACTTGCCACCGCACAATGGTCATGCCCCTTTCAGCCCAGTTCAACACCCTGCTCACCTGCAGTTCCCAGCCATGCCCCACGGACTGCAGCCGACAACGATGACCATGGTGCAGAACCCACAACCCATGGTGCATCAGCCAGCCTGTCCGCCGTTGGCTGGAAATATCGGCATTGATATGGCAGCCATGGCTTCTGGAGCTCAGGGAAAAACATGTTAG</cdnaseq>

Protein Sequence

<aaseq>MPPARVDRSEMRQNTSHQGSNDPRVQKERQAEWARPGRVFNRNTNKGGYFRNSLPGVTREFRVVKDNRQKVVGETIPGSFHNGVPSNEQIASNIGDKSSTEKLPAQRHPVTQNSNGRGVAQADNGRKEVKPSNDQTVGQSDGMITTMVGSHAVLAKGNQNRVLAVPSGTNNFTGELCCSSSDPIHVPSPGSKSAGTFGAIKREVGVVGARQRPSDNTATNTSTSNSSVKVPTSTATKENASNGQQSRSSGVSSKNSRPSSSTHLSSRPSSSSQYHSKPNTPVGHPKVNPQLEWKPKSVSPSPANHADNVVHSSAASSVDGNQAHMAGLSKKLSQTNVSEDEHVIIPAHLRVPDSERTHLIFGNFECDVESKAFTLAPDASTNREFNAHSSSRSTDDVPPTDQTDLVGSCVMLPKSDSFVSVSEYQHPLTEDMEVLSPGVFGEHRTNDMISTQVSHSSPQPQHQDNSAVHDFKEYEPDSRYEMPFITKAVDSEATQNIPYPSEVMGLHAANFNQLSVTAATQHPVPQMYHMHVSQYPNCLPYRHVFSPYYVPPVAVQNYSSNPAFTQLPSASSYLVMPNGTSQLAPNGMKYGPPHQCKQMFPGGPAGYGGFTNQNGYPVNTGVIGGTGSVEDANMSKYKDNNLYTLNPQAETADVWIQAPTDIPVMPSTPFYNMMGQPMSPHTAYLPPHNGHAPFSPVQHPAHLQFPAMPHGLQPTTMTMVQNPQPMVHQPACPPLAGNIGIDMAAMASGAQGKTC</aaseq>

Gene Sequence

<dnaseqindica>1..39#835..961#1688..1814#2229..2794#3259..3574#3736..3976#4097..4186#4706..5143#5240..5548#5755..5769#ATGCCACCCGCGCGCGTCGACCGGTCGGAGATGAGGCAGGTCAGTTTCGGACGAAAAAAATAAAAGAGGCATGGGCAGATTGGAGATCCGTTCAGGGTTTAATCGATTTCGTTATCTCTGTTCTTATTAACCAATCCAATCCAATCTCGTCTCGATTTGTGGGTTGGGGGTGCAGTTTGGAGTTCAGCTGAAACCCTATGCCCCCGCGATTAGGTCCGATCCTGTGTTTGATGGAGACATGACAATAACAAAGAGATGGGGTTCTGAATGTGCTGTGTATATTCGCTCCTGATGATGATGCATGAATGCTAACGTGTTTAATATTTGAATTTAACTGTGTTCGACCTTATGTGAAACCTCGTTTTATTGTTTATTATTATAATAAGTAGTGCTGCTTTTTTTTTCAGACCTTCCTGTTATTAGGTCTGAAATTAAAAGGATTGATGTTTGTGTTTTGCAATAAATTTTTAGATGGATGGATGTTTCCTCTTAAGGGTCATAGGATTTTAATGTGGACACTACTAGTAAAAATTTGGTTCTTCGTTGTACCGTGTCCTGTTGGTACTTTAGCAGTGGAAGCCCACACTAGATTTGGATATCATACTTGATATACAAATTGGCTATTAGTTTTTTGCTAATAAATATTACTGGCTTTCTGATTAAGAAAAGCTCAAAAATGTTATAGCCTGCTAACTGTTGCTATTTTGATATAAAATGTATTTCATATTTAGGATTTTACTTTGTTAATGAGGCATCAACAATATGATTTGTGATTACTGACTTACTGTGTTTATCCAAGTCTTTTCCTATTCTTAGCTTGTTCTGTTATTGCAGAACACAAGTCACCAAGGTTCCAATGATCCCAGAGTACAAAAGGAAAGGCAAGCAGAATGGGCCAGACCTGGAAGAGTTTTTAATAGGAACACTAACAAAGGAGGTTACTTTCGGAATTCATTGCCTGGTAAACTTTCATAAGTAAATAGCATAAAGTGTTCTTTTTAATAACTAGTGAGTGAACATGTCTTCTGTGGTACTTATTCCAGGTGCATTGCGTGAATATTTTTACCCTGTTAGAGGATCACTTCTGTTTTTTCTGTACAGTGTGCTCTGTGGTTAATGTTTGCATCTTATTGTTGCCCGAAGTGCAAGCTTGTGGTATCTGAGATGATATGTTACTGGATTTGCTCATTATCGTTTTTATTGATGCTGACATGTGATTGGTTTTGTGAATTCCATCTGCAAACAATGCCATCTTGGGAAAACCCTTACATTGCTTAATCAGAGTTATTATTCAAATTATCAGCCAATCGTTGATTAAGACAGAAAGAAATGCATGTTTCCTTGTATTCTTAGCCCCTTGGGCATCTTACCACCAACTGCATGCTTGTAAGTGTACTTCTACACTGCCATACTAACACGATGGATATATTTGCCTGGGCAAACAGTTATGAAATAAGGAATTTATGGAGGGTTGGCAACTCTTCTACATCACAATAAATTGTCTTTTTGGTGGTTGTAAAATAGCTTCTACTAGCTTGAATGCTACTCATTTTCAACATAGCCTGGACTCCTGGGGTAGAAGTTATTGTTATTACCAGTAATAACAACTATTCTATGTTCTACTTAGCTGTTCTGTGACCAATTCAAGGCGCTATATAGTCTAATTTTTAAAAGCTGATATTTGTAGGAGTCACTAGGGAGTTTCGTGTTGTGAAAGACAATCGACAGAAGGTAGTTGGTGAGACTATACCAGGATCATTTCATAATGGAGTCCCAAGCAATGAACAGATCGCTTCCAATATTGGAGACAAAAGGTAGAGTATGCATGATAGTAGAAATGAACAGATCGCTTCCAATATCAAACATATTGCTTCCAATATTTTCCCTTTGGAATATGCACTTGAGTATTTACACAGATAGAAAAATATGTCAGCTGAGGTAATCAAATGATCAAAAATTGTGTTAGCAGTTGTATAGAACAAACTATAATACATCTGTAGATGTACTTATTGTGTAATTGAATGACATGCCTTCTTTCCCATGTGCTATTCTATCTGCATTATACAATTCACAACCAGTAGTTATTTACTTGAATATTTAATAGCACTATTCGTTTCACTGCTTTATGGTTTGACATCTTGCTTTCTTTCATGGAAACTGAATTTGCTTTCAAAAATTTCACCAGTATCACTTCTGTTCATATATGTCTTTGTCATGTTTCTCTGAAGCTCAACTGAAAAGTTACCTGCACAACGCCATCCGGTTACTCAAAATTCTAATGGACGTGGGGTAGCTCAAGCTGATAATGGACGCAAAGAAGTCAAGCCTTCTAATGACCAAACAGTGGGACAATCTGATGGGATGATTACAACAATGGTTGGTTCACATGCAGTTCTAGCAAAGGGTAATCAGAACAGAGTGCTTGCTGTGCCATCAGGAACAAATAATTTTACTGGTGAACTTTGCTGCTCTTCGTCAGATCCAATACATGTACCCTCTCCTGGTTCTAAATCAGCTGGGACTTTTGGAGCAATAAAGCGTGAGGTTGGAGTAGTTGGTGCTAGGCAACGGCCATCTGATAATACAGCAACAAATACATCCACTTCAAACAGTTCAGTTAAGGTGCCAACAAGTACAGCAACAAAAGAGAATGCTTCAAATGGACAGCAATCTAGATCCTCTGGTGTATCATCGAAAAACTCCCGTCCTAGTTCATCTACACACTTGAGCAGTAGACCATCTTCTTCGAGTCAATATCATTCTAAGCCAAATACTCCTGTTGGTCATCCAAAAGGTTAGCGTTTCCATGGAAACTTACTTGGTTGGGAATTGAGATGTGTAAAAAGTACAATTATGGTGGGTATGTCATTTTGTTGCACATTCGGACATAAACTTCTTTCCTGCTCAAAAATGAACAGAGCAGTAGCTGTTAGCCTGTTAGGTCACTTTGCTTAGCATAACATGCTAATGACAAAATATATTCATTTGAGTAATTTCCAGTGTTAGCAATGCATAGTTTGACTTGGAGCCTTATTGTATTATATATCCACATCATTGTACATTTTCTCTATGTAACACTGTTTTATATTTTCTGAAAACCAATGATGCTAATTGTTGCCATTCAGTTTTGTATAAATTCTTATGTACTGTCTTTCAAAGTATTTGGACAATTCTAGATGGGCAGAGATTATTTAAGTTAGTTTTCCATCTTTTGGAGAACTGCATTTTTGTTAAACAGATATTGTGGTTTATATGCAGTGAACCCACAATTGGAGTGGAAACCCAAATCAGTAAGCCCCAGTCCTGCCAATCATGCAGATAATGTGGTACATTCTAGTGCTGCATCATCTGTTGATGGTAATCAGGCACACATGGCTGGTTTGTCTAAGAAGCTTTCACAAACTAATGTTTCTGAAGATGAGCATGTCATCATACCTGCACACCTCAGGGTACCAGACTCAGAAAGAACACATCTTATATTTGGTAATTTTGAATGTGATGTTGAGTCGAAGGCTTTTACATTAGCTCCTGATGCTTCAACTAACAGAGAGTTTAATGCCCATTCTTCTTCAAGGTGATTTTGCTGCATCTTCTCTTTGATATAATCTTGCATCATAACTATTGTTGAAGTGTTCAGATTTCTACTATGAAGTTATCCTTGTGTCCAAATTAAATCTGAGACATGCCACATGTAATTATTCGTTGATTGCAGTTTGACGCATTATACTCTTGCAGATCAACTGATGATGTGCCTCCTACTGACCAGACGGATCTTGTTGGCTCTTGTGTCATGCTTCCGAAATCAGATTCCTTTGTTTCAGTTTCCGAATATCAGCACCCATTGACTGAGGACATGGAGGTCTTGAGTCCAGGTGTTTTTGGAGAGCATAGGACAAATGATATGATTTCAACCCAGGTCTCACATTCTTCACCTCAACCCCAGCATCAGGACAATTCAGCAGTGCATGACTTTAAGGTGAATAGAATATATTAAGTGGATAGAATATATTAAGTGGATGGCAGTGTTTCTTATTCGTGGTTCAGCTTAGTGGTTTTACCTGACATTCATTCATTCATTCTTTTTCTCGTGTACCAGGAATATGAGCCAGATTCTAGGTATGAGATGCCATTTATCACTAAAGCTGTTGATAGTGAGGCGACCCAAAATATACCTTATCCGTCTGAGGTAATACCACCATGCCACCTTTATGTTCAAGTCCGGTTATTATGATCTGGTGTCTGCCTGTCTGCTATACGTCGCTTTCGATTTTACATTCATAAAGCACACTTAAGCAAACAGCCTTTATATTCAAGTCTGGATTCCTCTAGATTTATTTGCAGATTGTGAATGCAACGGTTTTTGAGAACCTGGTTATTTGACCTTGTATTAGAAGTTTCAGAAGCATCAGAGATCTGCATTTGTCTATGTGAACATCTGTTACAGCTCCAAAGAAGCTAAAAGGGAATCCAAGCTGTTAACGCAGCTTGCTTTTCCATACTACCTGCTAGTATTTTATCTTTTGTTTTTGCACTTTTGGCCTGAAATTATGTTTTATCAATGGTTGGACTAATCTTGACTGATGGCTCCAGCATTTACTTGTAGTTATAGTACTGGATGTTTAGCTTTTTCTTCTTAGGGCTTATCCACTGTCCAAGATCAATGTTTCCTTAGCAGCTGTGACATTGTGTGAAACTCTGTTGATAGGTGATGGGCTTGCATGCTGCAAATTTCAATCAGTTATCTGTTACTGCAGCAACTCAGCACCCAGTGCCTCAAATGTACCACATGCATGTATCGCAATATCCAAACTGCTTGCCATATCGACATGTTTTCTCTCCATACTATGTGCCTCCAGTGGCTGTTCAAAACTATTCAAGCAATCCAGCATTTACACAATTGCCAAGTGCCAGCAGCTATTTGGTAATGCCAAACGGAACGTCACAGCTAGCACCCAATGGCATGAAATATGGACCACCTCATCAGTGTAAGCAAATGTTCCCTGGTGGCCCTGCTGGATACGGTGGTTTTACAAATCAGAATGGTTACCCAGTCAATACTGGTGTAATTGGTGGCACTGGTAGTGTCGAAGATGCCAATATGAGTAAATATAAGGACAACAATCTTTACACACTCAACCCTCAGGTAATTATATATTTCATCCTTAGACCAAGCCTTTTCTGATCATAATTTTGACACATGCTGTACCTTAACATGAATAATATTTGTGCTTGGTTGCAGGCTGAAACAGCAGATGTGTGGATTCAGGCTCCTACAGATATTCCCGTCATGCCGTCAACACCATTCTACAACATGATGGGCCAACCAATGTCTCCCCATACAGCATACTTGCCACCGCACAATGGTCATGCCCCTTTCAGCCCAGTTCAACACCCTGCTCACCTGCAGTTCCCAGCCATGCCCCACGGACTGCAGCCGACAACGATGACCATGGTGCAGAACCCACAACCCATGGTGCATCAGCCAGCCTGTCCGCCGTTGGCTGGAAATATCGGCATTGATATGGCAGCCATGGCTTCTGGAGCTCAGGTTGGAGCATTTCAGCAAAACCAACTCAGCCATCTCGGCTGGGCTCCTCCCAGTTTTTTATGATGATTTGGATGGCAGTGCTCTCATGAGACGACAAGTGAGCTGGTTTCGTATCGACAAGAAAAAGAAAAGAAAAGAACTGATTGAAGAGCTATGCTCTAATGCAAGTAACTCATGATACTTGCCACCTTTTGTTTATGATGCAGGGAAAAACATGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012851