BGIOSGA012872

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Revision as of 09:53, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012872| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012872, complete gene.| tag = OsI_120...")
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Gene Name

BGIOSGA012872

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012872, complete gene.

LocusTag

OsI_12052

Ensembl Transcript ID

BGIOSGA012872-TA

Ensembl Protein ID

BGIOSGA012872-PA

Length

1545

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:19319456..19321000

Sequence Coding Region

19319456..19319644,19320171..19320271,19320574..19321000

Genome Context

<gbrowseImage1> name=IndicaChromosome03:19319456..19321000 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:19319456..19321000 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCCGCTCCCTCATCGCGCCGGCCACGCTTCGGCAGCAACGCCAAGCGCTACCGCGAGCCGCCGCCGGCCGCGCCTCGCATGGCGCTGCCACGCGCCACCGCCAGCAACCACGCCGGATTCAACGGGAAAATAAGGAAAGAGGAAGAAGAAAAGAAGGAAAGAAAAAAAAAAAGAAAAAAGAAAATCGTCCTTGGAGCCAAGAAGCTCCGCCAGACGATCGAGATGGGCACCCCACAGGACCGTGCGCCTACACCTTATGAGAATGATAAGGCGCTGCACTTCCTGCAAGCGTCATACAAGGAGTATGATGAGATGATCGACATCATGCAGGTGTCTGAGTCTCATGATGAGGTTCTCCATAAGAATTTTGTCTTCCAGCCACCTGGCAAGAGTGTTGGTCTTGAAGTCAATGCTAGAAGTTGCAAGGTTCGCAAGCCCACCCAGAGGAGGAGGGGCAAGCGTGATGGGAAGAAGGCAGCCGAGAAGTCAGAGGAAAAAGCTCCAGCTGCCCAGGGAGCACAAGGAGGCAAGGGCAAGAAGGAAGCCAAGCCAGCTCGCAATGACAAGCCATATGGCCAGCAGGACCAGACATGCTACAAGTGTGGGATTTGGGGGCCACTGGAGCTATATTTGCGAGGAGCCTTAGCACGTCGTCGACGCATACTAGGCCAGCAGGAATGCCAAGGCGTCCGCAGAGGCACACATGGTTGA</cdnaseq>

Protein Sequence

<aaseq>MAAAPSSRRPRFGSNAKRYREPPPAAPRMALPRATASNHAGFNGKIRKEEEEKKERKKKRKKKIVLGAKKLRQTIEMGTPQDRAPTPYENDKALHFLQASYKEYDEMIDIMQVSESHDEVLHKNFVFQPPGKSVGLEVNARSCKVRKPTQRRRGKRDGKKAAEKSEEKAPAAQGAQGGKGKKEAKPARNDKPYGQQDQTCYKCGIWGPLELYLRGALARRRRILGQQECQGVRRGTHG</aaseq>

Gene Sequence

<dnaseqindica>1..189#716..816#1119..1545#ATGGCCGCCGCTCCCTCATCGCGCCGGCCACGCTTCGGCAGCAACGCCAAGCGCTACCGCGAGCCGCCGCCGGCCGCGCCTCGCATGGCGCTGCCACGCGCCACCGCCAGCAACCACGCCGGATTCAACGGGAAAATAAGGAAAGAGGAAGAAGAAAAGAAGGAAAGAAAAAAAAAAAGAAAAAAGAAAGTAATTGGTGATTTTGCAAAAAGGCCCCCGGATTTTCTGAAAATTGTGCGCATATTTCTCAGCATGGAGATTCCTTGCGCCTAGACCCTAGAATTTCAGAAATTTCCATTTTATCCCTCCACCACATGGAAACTTAGTAAAGGGCCCCTGTACTTGCATATTTCACCTATATTTCATATTTAAGCATTTTCTTTTTATGTCTCATGAATTTTTGAATTTGATTTTCATGAGGCCTTATTTACTGTTATTTGATAGTTTGAAATTTCATTTTTGAGTACTTATATGAATATATGCATCCTTTTGTCCTCTTTATATGAATATTTGTATGAATTTATATGAACGCTAGTATTTCTTTATTGAAAAACTTGCATCTCCTACGTATAATTTTCATTCCCTATTGAATAATTCGCATTTCCTATTGAACAAGTTGCATTCCCTAAGAATATAAATATTGGAAAATCATGAAATATTTGCATTCATATTTGCAATCATGTTACTAGTAGTAACTTATGAATATTTTGTCCAGATCGTCCTTGGAGCCAAGAAGCTCCGCCAGACGATCGAGATGGGCACCCCACAGGACCGTGCGCCTACACCTTATGAGAATGATAAGGCGCTGCACTTCCTGTGACACCACCTCTGCGCCACGCTCAAGAATGAGTATATGGGATTGCGGAGCCCACTCACTCTTTGGACTGCACTAAAGAAGCGGTTCGAGAAATTGAAGTACACCATCCTGCCCCAAGCAGAGTAGGACTGGGCTCGCCTAAGGTTCACCGACTTCAAGAGCGTCTCCGAGTACAACTCCACACTGCACGGATCTGTATTAGCCTCTCCCTCTGTGGCAAGGTTGTCATGGATGTGGAAAAGATTGAGAATACGCTCTCCACCTTCCACCCTAGCGCCATGTAGAGCGCTCGTAACTACAGGCAAGCGTCATACAAGGAGTATGATGAGATGATCGACATCATGCAGGTGTCTGAGTCTCATGATGAGGTTCTCCATAAGAATTTTGTCTTCCAGCCACCTGGCAAGAGTGTTGGTCTTGAAGTCAATGCTAGAAGTTGCAAGGTTCGCAAGCCCACCCAGAGGAGGAGGGGCAAGCGTGATGGGAAGAAGGCAGCCGAGAAGTCAGAGGAAAAAGCTCCAGCTGCCCAGGGAGCACAAGGAGGCAAGGGCAAGAAGGAAGCCAAGCCAGCTCGCAATGACAAGCCATATGGCCAGCAGGACCAGACATGCTACAAGTGTGGGATTTGGGGGCCACTGGAGCTATATTTGCGAGGAGCCTTAGCACGTCGTCGACGCATACTAGGCCAGCAGGAATGCCAAGGCGTCCGCAGAGGCACACATGGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012872