Os09g0383300

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Revision as of 07:24, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0383300| Description = Similar to Mitogen-activated protein kinase kinase kinase 1 (EC 2.7.1.-) (Arabidospsis NPK1-related protein kinase 1)....")
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Gene Name

Os09g0383300

Description

Similar to Mitogen-activated protein kinase kinase kinase 1 (EC 2.7.1.-) (Arabidospsis NPK1-related protein kinase 1). Splice isoform 1S

Version

NM_001069601.2 GI:297609400 GeneID:4346940

Length

6817 bp

Definition

Oryza sativa Japonica Group Os09g0383300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:13614902..13621718

Sequence Coding Region

13614902..13615294,13615398..13615439,13615546..13615611,13615699..13615812,13615897..13615977
,13616075..13616152,13617164..13617246,13618107..13618188,13618263..13618363
,13618478..13618517,13618624..13618683,13618764..13618810,13618899..13619037
,13619178..13619393,13619472..13619806,13619987..13620058,13620703..13620745
,13621299..13621718

Expression

GEO Profiles:Os09g0383300

Genome Context

<gbrowseImage1> name=NC_008402:13614902..13621718 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:13614902..13621718 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgacgggacgacgccggcgggggagggttcggcgacctgttcgactccgtgcgccggtccatcgccttccgcaccagcacggccccggagacgccggggcctctcgggggcgggggcgggatcggggtacggatcagctcgtgcctccggaagtcgagggggatgggtctgctcgggctcatctccaagagcccctcgccgccgcgccgcctgctgccgccggcgcccgagttcagcggtggcggtggcggcgggggaaggggagggggagggggagaggagagcccgcagatccggtggcgtaagggcgagctgatcgggagcggcgcgttcgggcaggtctacctcgggatgaacctggacaccggagaactcctcgcagtaaagcaggttttgattgggagcaacaatgcgacgcgggagaaagcccaggcgcacataagagagctcgaggaagaagtgaagctacttaagaacctgtcacatcccaacattgttaagcggtaccttgggacagtccgggaggaagatactctgaatattttgctcgagttcgtgccaggaggttccattcagtctctccttgggaaactaggttcatttccggaggcagtcattagaaagtacacaaagcaaattttgcaagggttggagtatttgcataacaatgcaataatacatagagacataaagggagcgaacattcttgttgataacaaaggatgcattaaacttgctgattttggggcatctaagcaagtggcaaagttggctactatcacagccgctaaaacaatgaaagggacacctcactggatggcacctgaagtcattgttgggagtgggcataacttctctgcagacatctggagtgtgggatgcacagttattgaaatggctactggtaaaccaccatggagccagcagtaccaggaggttgcccttctatttcatgtcggaaccacaaagtcacacccgcctatacctgaacatctctcccccgaggccaaagattttctgctaaaatgcctgcagaaagaaccagagttgagatcgacagcatcagatttattgaagcacccatttgttacaggagaatcggagaacctgcagccactcaattgtgctgcacagcaggaaacttgcgtaaatgagcttcctgcacatgatgtgtccagtggcttgggtttaaatcattctgtcaactggcccactatcagttccaacaggtcttcaaaaatcaaacccttgtgggagggtagctgtgatgaggatgacatgtgtgagtttgctgacaaggatgactgcccagctgttggatctagctacaatcccatgtctgaaccatttgataactgggaaagcaagtttgatgcgagcccagagcaaacttctcatcaatcaatggaatttggtggattagctaaacatgctgaaagcagcatgaccgaaaatgattttacttttccttgcgaaggaagttgtgaagatgatgatgtacttacagaatcgaaaataaaagcatttcttgacgagaaggctcttgatctgaagaagctacaaacacctttatatgaggagttctacaacacggtgaatgctgggaattctcaggtagctgaccatacttccaacggaattttctcaaatagtcccaaattgccacctcggggaaagtcaccaacgagtaagatgagaggaggtgcagcagcagcatcaacttgtgataactcaaataatacgaggcctgaaagctgcagcaaccaattatcagaagacactgtacagagcagccgaattttgagagaaatagcttctccgcaacttgatgagttaggaaacaaaatccattctgatgtccaagatagcccaagtgtgagcttcgctgaaaggcagagaaagtggaaagaagaattggtccaggagcttgagagggaaagaggcaaccgggtttctgaaatgtttttacaattcttatatggtataatgttctctttaagaccaacttgttttgtccgcaccgacgctccgaactctgacgacgcgtccaagaaaaacgacctcgccgagcgtgctcatcacctccagtccaccttggaaggacgagcattattcaccggaacacttacaacaatgttgatgaggaaaactaagtttaagtggatgcggaacaagatatatcttccaaggctctataactggcctgagaccatccatgttgatcttgttactaaagacggtgaaacaacttttgtaccaaagttacaaggtgcaaataccatggaggatacgtatggcatacatttgtgttcatacgaactaggccaacaacaagaagcaagggagttttggggaacagagagagtagagtatagtatgtgggttgattttggtggaaattatgtgtag</cdnaseq>

Protein Sequence

<aaseq>MRRDDAGGGGFGDLFDSVRRSIAFRTSTAPETPGPLGGGGGIGV RISSCLRKSRGMGLLGLISKSPSPPRRLLPPAPEFSGGGGGGGRGGGGGEESPQIRWR KGELIGSGAFGQVYLGMNLDTGELLAVKQVLIGSNNATREKAQAHIRELEEEVKLLKN LSHPNIVKRYLGTVREEDTLNILLEFVPGGSIQSLLGKLGSFPEAVIRKYTKQILQGL EYLHNNAIIHRDIKGANILVDNKGCIKLADFGASKQVAKLATITAAKTMKGTPHWMAP EVIVGSGHNFSADIWSVGCTVIEMATGKPPWSQQYQEVALLFHVGTTKSHPPIPEHLS PEAKDFLLKCLQKEPELRSTASDLLKHPFVTGESENLQPLNCAAQQETCVNELPAHDV SSGLGLNHSVNWPTISSNRSSKIKPLWEGSCDEDDMCEFADKDDCPAVGSSYNPMSEP FDNWESKFDASPEQTSHQSMEFGGLAKHAESSMTENDFTFPCEGSCEDDDVLTESKIK AFLDEKALDLKKLQTPLYEEFYNTVNAGNSQVADHTSNGIFSNSPKLPPRGKSPTSKM RGGAAAASTCDNSNNTRPESCSNQLSEDTVQSSRILREIASPQLDELGNKIHSDVQDS PSVSFAERQRKWKEELVQELERERGNRVSEMFLQFLYGIMFSLRPTCFVRTDAPNSDD ASKKNDLAERAHHLQSTLEGRALFTGTLTTMLMRKTKFKWMRNKIYLPRLYNWPETIH VDLVTKDGETTFVPKLQGANTMEDTYGIHLCSYELGQQQEAREFWGTERVEYSMWVDF GGNYV</aaseq>

Gene Sequence

<dnaseqindica>1..393#497..538#645..710#798..911#996..1076#1174..1251#2263..2345#3206..3287#3362..3462#3577..3616#3723..3782#3863..3909#3998..4136#4277..4492#4571..4905#5086..5157#5802..5844#6398..6817#atgcgacgggacgacgccggcgggggagggttcggcgacctgttcgactccgtgcgccggtccatcgccttccgcaccagcacggccccggagacgccggggcctctcgggggcgggggcgggatcggggtacggatcagctcgtgcctccggaagtcgagggggatgggtctgctcgggctcatctccaagagcccctcgccgccgcgccgcctgctgccgccggcgcccgagttcagcggtggcggtggcggcgggggaaggggagggggagggggagaggagagcccgcagatccggtggcgtaagggcgagctgatcgggagcggcgcgttcgggcaggtctacctcgggatgaacctggacaccggagaactcctcgcagtaaagcaggtgaggcgggcttgcgacggtgggattttggtttaatttgtttggagttttggtggtattcggcatatcgatttacctctttcctatggtttgtttgttccaggttttgattgggagcaacaatgcgacgcgggagaaagcccaggtgagcagctttcatccaaccccctttcgtttgtctagagaaagaagaggaaaatcgagggctaatattgacatggagtaatccgtggtattggtcttttggtcaggcgcacataagagagctcgaggaagaagtgaagctacttaagaacctgtcacatcccaacattgttgtgagtggattcaatatggatcgcaattttttttaaaggaaattccatgatattatcgtttgatctaatttctttctgtggtttgagaagcggtaccttgggacagtccgggaggaagatactctgaatattttgctcgagttcgtgccaggaggttccattcagtctctccttgggaaactaggttcatttccggaggcagtaagtatcatcaaatctgtgtgatttgcaaattgggtgatttcattctggaaaacaaactgatcccttctatcaactaatcaggtcattagaaagtacacaaagcaaattttgcaagggttggagtatttgcataacaatgcaataatacatagagacataaaggtactcaaaatctgaattctgaacacacaataatatgtatttattttaccacttgttgtgctcattatgattattcctgttatttgtcaaattccagggagcgaacattcttgttgataacaaaggatgcattaaacttgctgattttggggcatctaagcaagtggcaaagttggtaagattgaaaaaactttgttcaatgtgttattaaggtcaagcataatccaaagaactcatgctgtctcatcttccttttatcaaagttggacaattaaaaccttcattctcaagaaaattgatcattagagctattattttgtttcagtattcagtataacaaagtttagtattatatgtttgtctagtttgaggaattttcctaactaaaaggcatatgtgttattcataaatctaccctgtctaatcacaccattagtcatcgtactaaatcactagtctgggttggggcaacatggaagtgtgagtttggtccatggctctatgcaaatttacattcctggagtaataaggcatttgctgcacaacttgcagcgtgtacagtcacaaaaaagaacatgcacatgatgaaagaggaaacagcataagctaatattgtgcctttagagtatttctacttgtgaaatgtaatagttttatagggccatggctaaaagtttgcacaggaaaacatggctacaggagcaagcccccacatcaaagcatgggactaggatgcttggacattgaattatatgactatttaataatataaagtaagctgttaatatgcaactgttgtggtctatttcattgtagatggtacctatttaaaatcagattttctaattctagtgaccttacccatgtttataaattgctcaatgcccatgcatatcttgctcattgttagtcattttggaagtttcagatattggtggatggccccttattgataagttgttacatgatatcatgttggaagttcaatcttttatttcgccgtgtattaactttaccaacaaatctaagtggtgctttcatgaaaagacgcttaacatgcaccatacatcgttatgctttcttatcataattgtgtacaagatatctgcctgctgcacttttacttaggttctacaattttgaactatcccataccaatgcacctgacaatgtttcatgctgtcaggctactatcacagccgctaaaacaatgaaagggacacctcactggatggcacctgaagtcattgttgggagtgggcataacttgtaagtggagaaactcttccggacttccagtcccattccttttccagtctgtataagacccaaaattctctctctctctttctctctgtgtgtgcgcgcgcgctcctcctatctctctgttgtagcagtcaatctcagttataatcgtccctgtttgcattacttaaagaactggcactcataataagatgctttgttacaaagtgaaagtgcaattttaaagcaaatggtgagcctgatttgaaaatatccattaatacttgaacttttttactccctccgtcccaaattatacagcgccctcttaaagtcaaactcggtaactttggctaataatcatagtatcatactaactatatatatgctaagtattatgcatgcaatatcactatattcatattttaaagtatttttatgtgatgctaatttcatatttgttgggaacataaaatggaataaattaatggtcaaagtatgttatttaagaccatataaaaaatataggccttataatttgggacagagggagtaatatttatgctatattgattttgggagagcagaaagcactaaaaagtaaaaattgctagatatgctttctgaactacataattattctagcatgagttgaaaatcgcatttagtctcattttgtataacaagttgagcaaacttgatcacatttagctactttttatatactcgcatatatttttttgtattcaactgatacagatatctaaatttgtaccaaggaaggaagtaaaacattattgttattcttaaaagctatttcagtatcatgttatttttctatttgttcttactttttagctgatccgtactatccatcctctcagctctgcagacatctggagtgtgggatgcacagttattgaaatggctactggtaaaccaccatggagccagcagtaccaggaggtaagttttaatgatatcaggccctacataagatgaaacttgtgttagttgttaacctaacaagctctttttaggttgcccttctatttcatgtcggaaccacaaagtcacacccgcctatacctgaacatctctcccccgaggccaaagattttctgctaaaatgcctgcagaagtaagttatgttctcacctcttagctaatattttgtccaaaagtttttgcaattaaaaaaaatagttcctgaatgttttgctctggtggcttgattatttctttcttctttcagagaaccagagttgagatcgacagcatcagatttattgaaggtatatttgtttgctgcagtgtagctggtgttttttttatgtgtttgtaagggtaaggtgatgttgctatttattaaaatatgacaccttcaacattttcttgcagcacccatttgttacaggagaatcggagaacctgcagccactcaattgtgctgcacagcaggttgattcctagcataatctgatgttacttcacccacccatttgtttgatttaataacttgcgctgaacacaattgacaggaaacttgcgtaaatgagcttcctgcacatgatgtgtccagtggcttgtaagttctgtgatttgtgagtttactcggtcttcaattttcacattattgtttttcttttcatgacaacttattcaactgcttgcaggggtttaaatcattctgtcaactggcccactatcagttccaacaggtcttcaaaaatcaaacccttgtgggagggtagctgtgatgaggatgacatgtgtgagtttgctgacaaggatgactgcccagctgttggatctgtaagaattttgcttcagctcttcctttttaagcattttatgtgagctattggtttcatgatctgtctatgcatttcatgaatctgctgaggatcaactgcattatgtcattagtcacgttacattcctgtcaatttcagagctacaatcccatgtctgaaccatttgataactgggaaagcaagtttgatgcgagcccagagcaaacttctcatcaatcaatggaatttggtggattagctaaacatgctgaaagcagcatgaccgaaaatgattttacttttccttgcgaaggaagttgtgaagatgatgatgtacttacagaatcgaaaataaaagcatttcttgacgagaaggtacttagcatttatgaaattacacaaattcagtactttactgctagtacttccactattgactgtttctctcaccaggctcttgatctgaagaagctacaaacacctttatatgaggagttctacaacacggtgaatgctgggaattctcaggtagctgaccatacttccaacggaattttctcaaatagtcccaaattgccacctcggggaaagtcaccaacgagtaagatgagaggaggtgcagcagcagcatcaacttgtgataactcaaataatacgaggcctgaaagctgcagcaaccaattatcagaagacactgtacagagcagccgaattttgagagaaatagcttctccgcaacttgatgagttaggaaacaaaatccattctgatgtccaagatagcccaaggtttgtgtcaaattgctttgaaacacagcatgttatgcaaaaaaagctaactgccttactaatgtagaaacaccgggtctgggattcattgcaatattctagtgatgtggccaagtgtcttgcattgattatctgctttaaccatcaacaatctaattgctggaccatttctgttaacagtgtgagcttcgctgaaaggcagagaaagtggaaagaagaattggtccaggagcttgagagggaaagaggcaagtaaaatctttgagatcctaaatctatctaatcgtgatattctgctgaactctgatttcaccagtgaatttgttaacagtgatgagattagctagctgtggcaaaacgccgtccccgaatagagcgcctaatgggaagcgagagcgacatcctgcccattgagaacagacaacaacaatcactgtttcttcatttcatcccacagaacaaccagtggtaagtggtaactatacaatgcttgcgattggtgtcagcagcagtatatagcatacactgcctgatcattcgaggtacatgacagcgtaccgatgccggggcaatccgcatagaatcctcgttgaagtgtaccgatgctggggcagccatcacggctgatcaggatcattatcgtggtattgcctggaaaacgttgtgctggagtagttctttgctggcgaggctgcatttttcattttttttttcatgatgtgtgctgtttagccgcatagttgatattggaaaagtgttgtataaattttgggtttgtaagcaaaaaaaaaaaagggcttggggctttgttttgaaagcatgtaataagccaagtaatgcaaattatggaagacttgattttgtgagctttggggccactacgacatcctttgaagccgggtttctgaaatgtttttacaattcttatatggtataatggtaagtttgtggttggtgtgatgcactgtaattatttttgtaaagctgatgtggatattggaacttattatcattgtctagtttattttacagcttgaactacgttcagataaatatgttgtaaaaaaacatatcatctttcgcaccgaggtcttgtaaattcaggaccggacatgtccatggtcaccatggagtaactaaaagttcaggcgtgacgtcatcctcaaggtctggtccaggattgcacacggtgatagtacctagggtttcccaaaccgtcggggccgggattaccgtgcctcggcggtaagcacggttaccgtgtgaaaaatcgtacgaaaccgtgcaaaatttatcaaaaatttaaattattttttaaatttatttgaatttaaggaggttactgcggtttttctattaccgtacccccgcggtaaggcctgtaactgtgataaccgcgcggttaccgacggtttgggaaaccctactagtaccccgtcccagatcataaacgtacaatcctttatcatctagcttcaaaaaataaatgcagttctctttaagaccaacttgttttgtccgcaccgacgctccgaactctgacgacgcgtccaagaaaaacgacctcgccgagcgtgctcatcacctccagtccaccttggaaggacgagcattattcaccggaacacttacaacaatgttgatgaggaaaactaagtttaagtggatgcggaacaagatatatcttccaaggctctataactggcctgagaccatccatgttgatcttgttactaaagacggtgaaacaacttttgtaccaaagttacaaggtgcaaataccatggaggatacgtatggcatacatttgtgttcatacgaactaggccaacaacaagaagcaagggagttttggggaacagagagagtagagtatagtatgtgggttgattttggtggaaattatgtgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0383300, RefSeq:Os09g0383300