BGIOSGA012881

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Revision as of 09:53, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012881| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012881, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA012881

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012881, complete gene.

LocusTag

OSJNBB0056B16.23

Ensembl Transcript ID

BGIOSGA012881-TA

Ensembl Protein ID

BGIOSGA012881-PA

Length

4138

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:19533210..19537347

Sequence Coding Region

19533210..19533361,19534024..19534072,19534181..19535845,19535945..19536086,19536596..19537347

Genome Context

<gbrowseImage1> name=IndicaChromosome03:19533210..19537347 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:19533210..19537347 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGTCCCGGATGATGCGGGCGTTCGCGCAGGAGGCTTCCGACTTCGACCGGCAGATGGGCTGCATGGCCGGCTATGTTCCAGATCTTCGACCGCCGCCGCCTCCTCACCGCGCGTCAACGCGGCGGAGCCCGAGGCGCGGCGCCACCAGCAACAGCAATGTCTCGATTCAAAACCCAGTTGCTTCAAACAACACTCTGGACAAAACCTTCAGCAAAAGTATGACCGAGAACAGTAGCCTCTCCATGGAATCATCGCGGGCATCTTCTTCTTCCTCATCGTGCTCTTCGTTCTCGTCCACAGACATCAACAGACCAATACAACAAGAGCTCTCCTACATCAACAAAGAGCGTTTTGCTGGGAAGCCACCAAGAAGCTCACAGACAAAGAGTGTGAAATGTTCCAAGACAGAGGCCAAAACCAAAGACCCACACACTGGCTTTAGAGACATTGTCAAGGAGTCCATCAACCGGGAAACCCATGGTATGACCATCAAGACGTCGACAAAGGAGTCCAGAAAAGGATTGCACAAAGACTCACCAAGGCCGTTGCTGATCTCCAAATCAACCGATGGAACTTACGTGATTGGGATCGACAGGAGCACCGGCGTTCCTGGATATGTTCATGAATCCAGCAGGCCACCACGCTTCTCATGCGACGATCGGCAACTCCTGAGGTCGGTCGAAGCGCAAGACAGCAAGAAGCCTTCAGCAAAGCTCAAGGAGCTTCCCAGGCTGTCCTTGGACAGCAGAAAAGAATCCATGAATCCATGTTCACGTCTGAAGAACTCTGGCTACATAAGAACTGATGACAACCTCCTGGATGTTCTGAAGCACCAAGAATCGCCGAGCCATCAGCGGGCCAGCAGCGTCGTTGCCAAGCTCATGGGGTTGGAAGGAACTACTCCTGACATCCATGAGACGGCAAGGTCACCTACACCTGTCCATGGCACGCAAATTGATCAGCCGTCACACTGTCAAAGGATCAAGAGCCAAGATCATAGTGTCCCGGTGCAGAAGAATCACTCTCCAGTACTGAAAACCAATCCTTCTCCAAGAATTATCCCTGAAGCAGCCCCATGGAGACAGAATGAGAGAGCTGTAACAGGACGTGCAGCTGAAGTGAAGCCAAGAACTGCATCCATCTATGCTGACATACAGAGAAGACTCAGGGGTCTAGAGTTGTCGGAATGCAACAAGGAACTGAGGGCTCTCAGGATATTGAGCACACTGCACAAAAAGGATGGCCCAAGCCAGAGCGACAACAATCCTGAATTAACAGCCATTCAAAAGAAGGCCTCTGAACAAATCATTGATTCTGAAAATTTCCAGTCTCCAATTGTGATCATGAAACCAGCAAGATGCATCACAAAACCTGATGCTTCAGATACTTTGGTTGCTCCCCTTTCAAGGCCAAAAGGCATAAGAAGACTACGGCATGAAGAGACATCTTTCACCAGGAAGAATGAAAACAGTGATAGCAAGAGAAATCATTCTCCGAATGAAAGTGCTCATTCCAGTGGCGAGGAACCTGTAAATTCTGCAAGATCACCAAGGCTTTCCAGCTCATTGAGCCCCAGGCTGGCACAGAAGAAGGCGGACTCTGAAAGGAGGTCTCGTCCACCGGTTTTGCCAACGTCACCAGGCAAGAAATCTAAAGAAACAGTGTCCCCAAGAGGCAGGCTAAGATCAAGGCACTCGCAAACAAAGAGCAACTCTGACAACGATAATGTGTTACACATCCCTGAAACTAAAATCAATTTGGCAAAGCAGATCGATGTGGGTGTCATTGATCATCCAAATCCTCTGAATGCCAACTCACCATATATCCATCAAAGCAAAATAGCTTCAACACCCAATCGTGAGGAAATGCCTACAATTCTACCTGCAGACAAGAAGAAGATCCATCCACAGGAGAACATCCCAAGTCCTGTGTCAGTTCTTGATGCAACATTTTATCATGAGGGGTCATCGCCTTCTCTGAAGAGAATCTCAGATTCCTTCAAAGACGGCGAGACGCATACTTCAGATGAGAGTTGGAACCCAACAAGCCTCCCTGATACACCACCTTCAAAGACAAGCAACGATGGCAACCAGATAAAGGCAGAAAACATGAAAGCCCTCATCCAAAAGCTTGAGCTCTTGCAAATGTTGAGTGAGGAAGCTCTGAAAACCGATGACACTTTTTCATCAGTTGCTGCCAATAAAGATCACCAGTACCTCTACGAGATACTTTCAGCATCAGGGATCCTACACAACAAACTAAATTTTCAAATGATGCCTCATCAGCTGCGACCATCAAGCTACCCGATTAATCCAGAGCTTTTCCTCATCCTTGAACAAGCAAAACCAGACGAAGAAAAGCTGCACCGTAGGCTCATATTTGATCTTGCAAATGAACTCCTCGCCCAGCAAATGGATGCCAACCACACTGTGAATTCATCAGTGCAGTTATTTCAGTCAAAGAAGTTAAGTGGGTGGCAACTTTTCAAGGACTTATGTGCAGAGATTGACATGATCCAGTCTCGGTCCTCAATGATAAGGTGCTCTGAAGAGGAAGATAGCAGGCTAGCAGAGGATGCAATGCAAGGCATGAAAGAGTGGAAGAGCTCCGACAGTGAACGGCAAGGAATTGTTTTGGCCATTGAAAAATCCATCTTTAAGGATCTTATTGATGAGATAATTAGTGGAGTAGACAAAGGGAAGGTGCACCTGACGCAATGGAAGCTAAGGAGGCAGCTGTCTTTCATCAGCATATAG</cdnaseq>

Protein Sequence

<aaseq>MPSRMMRAFAQEASDFDRQMGCMAGYVPDLRPPPPPHRASTRRSPRRGATSNSNVSIQNPVASNNTLDKTFSKSMTENSSLSMESSRASSSSSSCSSFSSTDINRPIQQELSYINKERFAGKPPRSSQTKSVKCSKTEAKTKDPHTGFRDIVKESINRETHGMTIKTSTKESRKGLHKDSPRPLLISKSTDGTYVIGIDRSTGVPGYVHESSRPPRFSCDDRQLLRSVEAQDSKKPSAKLKELPRLSLDSRKESMNPCSRLKNSGYIRTDDNLLDVLKHQESPSHQRASSVVAKLMGLEGTTPDIHETARSPTPVHGTQIDQPSHCQRIKSQDHSVPVQKNHSPVLKTNPSPRIIPEAAPWRQNERAVTGRAAEVKPRTASIYADIQRRLRGLELSECNKELRALRILSTLHKKDGPSQSDNNPELTAIQKKASEQIIDSENFQSPIVIMKPARCITKPDASDTLVAPLSRPKGIRRLRHEETSFTRKNENSDSKRNHSPNESAHSSGEEPVNSARSPRLSSSLSPRLAQKKADSERRSRPPVLPTSPGKKSKETVSPRGRLRSRHSQTKSNSDNDNVLHIPETKINLAKQIDVGVIDHPNPLNANSPYIHQSKIASTPNREEMPTILPADKKKIHPQENIPSPVSVLDATFYHEGSSPSLKRISDSFKDGETHTSDESWNPTSLPDTPPSKTSNDGNQIKAENMKALIQKLELLQMLSEEALKTDDTFSSVAANKDHQYLYEILSASGILHNKLNFQMMPHQLRPSSYPINPELFLILEQAKPDEEKLHRRLIFDLANELLAQQMDANHTVNSSVQLFQSKKLSGWQLFKDLCAEIDMIQSRSSMIRCSEEEDSRLAEDAMQGMKEWKSSDSERQGIVLAIEKSIFKDLIDEIISGVDKGKVHLTQWKLRRQLSFISI</aaseq>

Gene Sequence

<dnaseqindica>1..152#815..863#972..2636#2736..2877#3387..4138#ATGCCGTCCCGGATGATGCGGGCGTTCGCGCAGGAGGCTTCCGACTTCGACCGGCAGATGGGCTGCATGGCCGGCTATGTTCCAGATCTTCGACCGCCGCCGCCTCCTCACCGCGCGTCAACGCGGCGGAGCCCGAGGCGCGGCGCCACCAGGTAGTGGTACCATACCAATTCTTCTTCTCTGTACTCTTCTGCGGCGTGTGCTCTTCCTGTAGCTCTTCTTCTTCTTCTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTGCTGCCAAAGTTTATCACAAAGACAAAACTGAATACTAACTGTCCTGTGGAGATATGAACAGTGTTACTGGCAGTAGATGCTAAACTAGAACAGGATTAAAAAATTGTTTCGTTTAGAAAGTACTGCTGCTGCCAAGTAAGAACAGGGGAAATTTATAGGGAGGTACATGGTCATGGACAAGAAACTGACACAAGTTCAGAAGCTGCAGGAATGTAGATGTAGCACATATGAGTTGTAGTAATGGGCAATTGCACAGTGAATAATCAGTCAAGTAAAAATGAAATGGTAGTAAAGTGAAGTGCTTTTTCTATTCAGATATTTGGTATTCTTTGGCTGAAACAAATCAATAGATTTCAGTGATATGTTCTTGATCAAATCCAACTTTTAAAATTCAGATATCTTTATGATATTGATCTTTTCCTTCCCTCGATCAAATTAGATATTTATAATTTAACTGCGGTAACATTCTTTTGGTTTATACCCAACTACAGTTCATATTAATAACTGTTTCCTGAATACTTTCTTTAGGCCATGTTTTGCCAAACAGCAACAGCAATGTCTCGATTCAAAACCCAGTTGCTTCAAACAACACTCTGGTAATTTTCCTACTGTACTGTGCATGACAAATATATATCCCAAGTATGCAGTTCATCTGCCTCAAACAGACTGGTTTTTGACTCAAAACATAATACTTACTTGTGTAGGACAAAACCTTCAGCAAAAGTATGACCGAGAACAGTAGCCTCTCCATGGAATCATCGCGGGCATCTTCTTCTTCCTCATCGTGCTCTTCGTTCTCGTCCACAGACATCAACAGACCAATACAACAAGAGCTCTCCTACATCAACAAAGAGCGTTTTGCTGGGAAGCCACCAAGAAGCTCACAGACAAAGAGTGTGAAATGTTCCAAGACAGAGGCCAAAACCAAAGACCCACACACTGGCTTTAGAGACATTGTCAAGGAGTCCATCAACCGGGAAACCCATGGTATGACCATCAAGACGTCGACAAAGGAGTCCAGAAAAGGATTGCACAAAGACTCACCAAGGCCGTTGCTGATCTCCAAATCAACCGATGGAACTTACGTGATTGGGATCGACAGGAGCACCGGCGTTCCTGGATATGTTCATGAATCCAGCAGGCCACCACGCTTCTCATGCGACGATCGGCAACTCCTGAGGTCGGTCGAAGCGCAAGACAGCAAGAAGCCTTCAGCAAAGCTCAAGGAGCTTCCCAGGCTGTCCTTGGACAGCAGAAAAGAATCCATGAATCCATGTTCACGTCTGAAGAACTCTGGCTACATAAGAACTGATGACAACCTCCTGGATGTTCTGAAGCACCAAGAATCGCCGAGCCATCAGCGGGCCAGCAGCGTCGTTGCCAAGCTCATGGGGTTGGAAGGAACTACTCCTGACATCCATGAGACGGCAAGGTCACCTACACCTGTCCATGGCACGCAAATTGATCAGCCGTCACACTGTCAAAGGATCAAGAGCCAAGATCATAGTGTCCCGGTGCAGAAGAATCACTCTCCAGTACTGAAAACCAATCCTTCTCCAAGAATTATCCCTGAAGCAGCCCCATGGAGACAGAATGAGAGAGCTGTAACAGGACGTGCAGCTGAAGTGAAGCCAAGAACTGCATCCATCTATGCTGACATACAGAGAAGACTCAGGGGTCTAGAGTTGTCGGAATGCAACAAGGAACTGAGGGCTCTCAGGATATTGAGCACACTGCACAAAAAGGATGGCCCAAGCCAGAGCGACAACAATCCTGAATTAACAGCCATTCAAAAGAAGGCCTCTGAACAAATCATTGATTCTGAAAATTTCCAGTCTCCAATTGTGATCATGAAACCAGCAAGATGCATCACAAAACCTGATGCTTCAGATACTTTGGTTGCTCCCCTTTCAAGGCCAAAAGGCATAAGAAGACTACGGCATGAAGAGACATCTTTCACCAGGAAGAATGAAAACAGTGATAGCAAGAGAAATCATTCTCCGAATGAAAGTGCTCATTCCAGTGGCGAGGAACCTGTAAATTCTGCAAGATCACCAAGGCTTTCCAGCTCATTGAGCCCCAGGCTGGCACAGAAGAAGGCGGACTCTGAAAGGAGGTCTCGTCCACCGGTTTTGCCAACGTCACCAGGCAAGAAATCTAAAGAAACAGTGTCCCCAAGAGGCAGGCTAAGATCAAGGCACTCGCAAACAAAGAGCAACTCTGACAACGATAATGTGTTACACATCCCTGAAACTAAAATCAATTTGGCAAAGCAGATCGATGTGGGTGTCATTGATCATCCAAATCCTCTGAATGCCAACTCACCATATATCCATCAAAGCAAAATAGCTTCAACACCCAATCGTGAGGTACAGAAAATTAACTGTAGTACCACCTCTAAAGACCTTACTGTTATGAAAACATTATCTGGCAGTAACAACTGATTGACAAAACATTGTTTTTCCCAGGAAATGCCTACAATTCTACCTGCAGACAAGAAGAAGATCCATCCACAGGAGAACATCCCAAGTCCTGTGTCAGTTCTTGATGCAACATTTTATCATGAGGGGTCATCGCCTTCTCTGAAGAGAATCTCAGATTCCTTCAAAGGTGAGGACTTGGTCTGGCAAGCTATTCTTCTGCAAACTTTTTACTACTGAGTTTTTATACTGTTTGTAACTTTGTTTCCATCCACTAAGGAAGCTCAAACTGGTTAGGCATAGGACAAGCATACTTAGCTGTAAGCACATCCACCAATCATAGTGACAGGCAACCAGTAGCCAATGCACCAAGCATAGCTTGTGGTCCTTTCAGATCGGAAGGATCACAGTAAATTGACAGTTGCAGATACACATGTGAGTGTTTGCTTGTGCCAAACTGTTAGAGAGTACAATTCCTTAGCTGCCTGCTGTTGTTCATGTCTGCAGTCTGCACCTAACATCTACAAGGAACCCCACATGTTGCACTTGCCACGAAGGAACATGATAGTATGTTGGTTAATGTGCAGACATACTTATGTAGATGAGCCCACCAATTATTTTGATTTTTATAGATGAGACAGAATGTCAGATAGACAAGAATTATCAACTTATCTTATCTTTTTTTTTTCACTTGTTCAGACGGCGAGACGCATACTTCAGATGAGAGTTGGAACCCAACAAGCCTCCCTGATACACCACCTTCAAAGACAAGCAACGATGGCAACCAGATAAAGGCAGAAAACATGAAAGCCCTCATCCAAAAGCTTGAGCTCTTGCAAATGTTGAGTGAGGAAGCTCTGAAAACCGATGACACTTTTTCATCAGTTGCTGCCAATAAAGATCACCAGTACCTCTACGAGATACTTTCAGCATCAGGGATCCTACACAACAAACTAAATTTTCAAATGATGCCTCATCAGCTGCGACCATCAAGCTACCCGATTAATCCAGAGCTTTTCCTCATCCTTGAACAAGCAAAACCAGACGAAGAAAAGCTGCACCGTAGGCTCATATTTGATCTTGCAAATGAACTCCTCGCCCAGCAAATGGATGCCAACCACACTGTGAATTCATCAGTGCAGTTATTTCAGTCAAAGAAGTTAAGTGGGTGGCAACTTTTCAAGGACTTATGTGCAGAGATTGACATGATCCAGTCTCGGTCCTCAATGATAAGGTGCTCTGAAGAGGAAGATAGCAGGCTAGCAGAGGATGCAATGCAAGGCATGAAAGAGTGGAAGAGCTCCGACAGTGAACGGCAAGGAATTGTTTTGGCCATTGAAAAATCCATCTTTAAGGATCTTATTGATGAGATAATTAGTGGAGTAGACAAAGGGAAGGTGCACCTGACGCAATGGAAGCTAAGGAGGCAGCTGTCTTTCATCAGCATATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012881