BGIOSGA012905

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Revision as of 09:54, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012905| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012905, complete gene.| tag = OsI_121...")
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Gene Name

BGIOSGA012905

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012905, complete gene.

LocusTag

OsI_12112

Ensembl Transcript ID

BGIOSGA012905-TA

Ensembl Protein ID

BGIOSGA012905-PA

Length

7286

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:19794213..19801498

Sequence Coding Region

19794213..19794239,19794437..19794556,19795446..19795568,19796913..19796981,19797070..19797174
,19799658..19799754,19799850..19800088,19800562..19801152,19801280..19801498

Genome Context

<gbrowseImage1> name=IndicaChromosome03:19794213..19801498 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:19794213..19801498 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGCCGACACACCAGATTATCAAGGTGGCAAGGACAGAGGATTTCTCGAGTATTGGGAAACATGGCCGCTACTTCGATCTCGTCGACTTCAGCGTCATCGAGGGGTTCAAAGTCCCGGCGGACATGACCATCTGCAGTTTCAAGGAGAGGCTCACAGAGGAATTTGGAACCCCTGTGCAATGTCAACGCCTGTGGTGGTGGACTAGACGGCAGAACAACACATACCGTGTTGACAGGCCATTGACAACCGAAGAGGAGAAAATACCTGAAATAAAATTTGACCCATGGGTGTTGTGCGAAGCCATTGACCTTCATCGTACCTTTTCAGAAAATGAGATTGTAACTGGGGACATTATTTGCTACCAGAAAATCTTGAAGACACAGGACTTGCCAAAATATCATTCTGTTGCATCTTTTCTCCAGCATATTTGTGATCAGAAGGAAGAAGAAATGAAGAGACAAATTTTAGAAGAGAAGATTGCTGGGTTAGAACACCAGGCATCAGCAGATCGTCTTGAGAAAGTAGAGACACTGATAGCGTATGATCAGATGAAACATGAACGAGACAATGCTGTGCGACAAGTGAACGAGCTGCGCGATCAGAGCACACACGCCATTCTCAAATTCTCCCGTTGTGACCTGGAACAAGCGACGGAGCATTTCACCGATGCCTGTAAGGTTGGTGATACTGAATATGGCCGCACATACAAAGCCATCATGCACGGTACCGAGGTGGCGATCAAGCTGTCCAGCACCGAGAGCTTATTTCAACAAGAGATCATCGGGGAGATCTGCTGCGCGCTGCTCTTCCTCCACTCGAACAACAAGAATCCTCCTACTGCTGCTTTGATCCATGGCGATCTCAGGCCTTGCAACATCCTCATCGACGACGACGCCAGCTACAGAAGCAGGCTCTGCAACGTCGGCCTATCGAGCCTGTTCTTGCAGCCCGGGACCTGCCCACCCAACCTGATGGAGAGGCTGCCGTACATGGACCCTGAGTTCATCACCACCGGGGAGCTCACAACACTCTCCGATGTGTATTCATTTGGTGTGATCATCCTACGGCTATTGACCGGGATGGCACCGTTGAATCTGTCCAAGAAAGTTGCAGCGGAATTGGAGAGTGATAACCTGCACAGGCTGATCGATAAATCTGCTGGAGACTGGCCTTACAAGGAGGCCAAACAGCTGGCTGTCCTTGGTGTTAGATGCGCTGAAATGGCAAGGGAGAAACGGCCCGATCTCTTGAACGATGTGTGGAGAGTCGTCAGGCCACTGATGAGGAAGCCCTCTTCTTGCCCGTACTTTCCACCGGCATCACCAGAAGTTTGTATCCCTGCTCCTTTCATCTGTCCGATCCTCATGGAGATCATGAAAGATCCTCAAGTCGCATCTGATGGGTTCACCTATGAAGGAGAGGCCATAAGGAGGTGGTTTGATAGCGGGAATAATAGGTCTCCGATGACGAACTTGGTCCTTCCCGATCTCAAACTCATCCCTAATCGTGTCCTCCGTTCTTCCATCCATGAGTATCTTCGGCAGCAGAAACAACAGCAGCAGCAGGAGGAGGGTTCAGTCACCTAA</cdnaseq>

Protein Sequence

<aaseq>MPPTHQIIKVARTEDFSSIGKHGRYFDLVDFSVIEGFKVPADMTICSFKERLTEEFGTPVQCQRLWWWTRRQNNTYRVDRPLTTEEEKIPEIKFDPWVLCEAIDLHRTFSENEIVTGDIICYQKILKTQDLPKYHSVASFLQHICDQKEEEMKRQILEEKIAGLEHQASADRLEKVETLIAYDQMKHERDNAVRQVNELRDQSTHAILKFSRCDLEQATEHFTDACKVGDTEYGRTYKAIMHGTEVAIKLSSTESLFQQEIIGEICCALLFLHSNNKNPPTAALIHGDLRPCNILIDDDASYRSRLCNVGLSSLFLQPGTCPPNLMERLPYMDPEFITTGELTTLSDVYSFGVIILRLLTGMAPLNLSKKVAAELESDNLHRLIDKSAGDWPYKEAKQLAVLGVRCAEMAREKRPDLLNDVWRVVRPLMRKPSSCPYFPPASPEVCIPAPFICPILMEIMKDPQVASDGFTYEGEAIRRWFDSGNNRSPMTNLVLPDLKLIPNRVLRSSIHEYLRQQKQQQQQEEGSVT</aaseq>

Gene Sequence

<dnaseqindica>1..27#225..344#1234..1356#2701..2769#2858..2962#5446..5542#5638..5876#6350..6940#7068..7286#ATGCCGCCGACACACCAGATTATCAAGGTGATGCGACTCTCTCTCCGCGCGCTAGCTCCCCATCTTCTCCTTGCATTCGCTGAGATTATAGTGAGATTAGATTGGTTCCGCGCAAAATTAATCCGATCATGCATATATATGGAGGGTGTGGTTAGTTGTTCTTGGGTTAATATAATTATTATTAATATGTTGGTCTGCTGCTTGAATATATATATATACTCCAGGTGGCAAGGACAGAGGATTTCTCGAGTATTGGGAAACATGGCCGCTACTTCGATCTCGTCGACTTCAGCGTCATCGAGGGGTTCAAAGTCCCGGCGGACATGACCATCTGCAGTTTCAAGGTAGTAAAATAATAATAATTATATTCCATTATCCTAAGAAAAAAAATCCTTCTTAAATCACGGGAAGATATTTTCTTTCTTTGTATTAATTGGTCAGCATTACTTGGACACTTGACTCTAGTTTATTTTGATGGTTCAGGGAAAAAGAAACGCTAATGATCGAGCATGGGGTAAATGAATGAATTGCATGACCTGACATCTGATATTTTGAACTAGCCATTGTCACTGTTGTAGCGAGTATTGTCCTGGAAACCAACCAACCATTGCATTAGGCAGTGGCGGAGTTAGAAATTACTGAAGAATATAAGTTAAAATAGGACTCAAATTAATAGAGTGTTGATTTTGTAAAAAAATTATATGATGATTTAACAAAATTTAAACATGATTTTAGAGGGCTCAATTTTTAGCTGCCCTATGTCTGCATCCGCTTATGTCGTTAGGCATCCTAGCTTGTGAAATTTATACTAATTTATACTAGCTGAATGATAATGCTTTGCTAAGAATAAAAATAAATATATTGTAATATTAACTAAATAAATAAATAAATAAATATTCTATGAAATATGTTACCTATCATTTTATTGTAGGAATATTCATCTTATTTTATTTTTTATGTTGTTACCCATTTAGATTCAATTATTTTCAATATTAAAAAGTAGGGTACCTTTGACAGAGGTGACTGATTTACTACCACTGTCACCACTTTTCTTAAAGGATCGAGTACAGAAATATGCTAGTTTAGGATACTTCTGCCCTAATATAATATAATGAGAGTATTTGCCAAATGTATATGCTTTACACATGTAGACTAACAACCCTGCCTGACTGTTTATCAGCCTGTCATTGTAATGTTTCCTACTCCAGTACTGATAGATTCAACTTGTCACAGGAGAGGCTCACAGAGGAATTTGGAACCCCTGTGCAATGTCAACGCCTGTGGTGGTGGACTAGACGGCAGAACAACACATACCGTGTTGACAGGCCATTGACAACCGAAGAGGAGAAAATACCTGTAAGTAAACATTGTGATCACCTGACTGGCTCTTCATACTGTTTTGTTCTATGCAGTAAAAATGAGGCATTATATACTAAGAATATAGTATATAATGACTCATTTTCTAGTGGTTGAAAACTTCACATGAATTTTGCCCTCCATCATTTTCCATGTCATTTCCCTAAAAGTTGTGCTGAAGAGAGCAGATAAAGTTCTCACAAGCAAAATTTTACTCTATCAATTAATTGATCGCTATTTTATTTTAGCACAATGCACTTTCGGAGCTTGGTATATTTATAGGCGCACTACCTTGATCATATAACATCTTAATGAAGAATTGAATGAGGTGTGCCATTATTACCCTTATACTTCCTCCGTCCCATAATATAAGGGATTTTGACATTTGCTTGCACTGTTTGACCAATCGTTTTATTTAAAAAATTTGTGCAAATATAAAAAACAAAAAGTTATGCTTAAAGTACTTTAGATAATAAAATAAGTCAAAAAAAATAATAATTCTAAATTTTTTTGAATAAGACGAATGGTCAAACAGTGCAAGTAAAATATCAAAATCTTTATATTAGAGGACGGAGAGAGTCAATTCTTGCTGAGCTATGTTTAACCCTTCATAGTTTTATGGTTATGCATCCCTTTCATTCTGTCAAGAAGAATGCTGCCTTTGATCTTCCGAGTTCATACAGCCTTTATTTTAGAAAATTAATATTGTGAATGCACACTCTTGTAGGTATCAACGCTACCACGGTGCAGTACTAGCGATCATCTAGAGCTTTTTCTGGAGGTTGAGCTTGGACTTCAGATAATGTTTTACTATTTCTTTTGGGGAAATGAACCCTTCTGATTTCATCCATCGATTTGTCATTCTGTTGAAGTATCAAAAATATTGGCGCACTGTAGGTGGTTCACACTCTTGCCATACCGAAATGGCTCAACAGAGATGATTACCTGGTGTTTCTAAAGCTTTATGACCCAGAAAAAGCACGGCTTCGGTCAGTATACTTCTTTGTTGCAACTTCTTTTTTTGGGTCTTATTTATTTGTTCATTATGATTTAATTTGTTATTCTGTACAAGGAGATAGGTATGTTGGCACGATGTATGTGAAAGATTCATGGACGGTTTCACATGTTCTTCAAACACTAAGAAATCTAGCTGGTTGCGTGGAAGTGGCAGAATAGAATTGTATAAGGTCAGGCTTTTGTACTGATGCAAGCTAGCTTCTCTGATTTTCAATTGAACAGATTTATCTCGTCTGTAGTGTTTTCTCAACTTCTTTTTATCGAATACGCAAGAGAATTATGTATCATTTGTATTAAGAAGATGTTCTCTCACTTTCTGGCATGCAGGAAATAAAATTTGACCCATGGGTGTTGTGCGAAGCCATTGACCTTCATCGTACCTTTTCAGAAAATGAGGTATGTTTATGAGTACACTTCTCCTCGCTTCTGCGCTTTCCTCACTCTCCCTTAATCAAGATTTAAATTCGTTACTTTCTTTCTGCAGATTGTAACTGGGGACATTATTTGCTACCAGAAAATCTTGAAGACACAGGACTTGCCAAAATATCATTCTGTTGCATCTTTTCTCCAGCATATTTGTGATCAGAAGGTAGCCGTTCTGCTTTGTTATCTTCTTGCATGCTGTAGGTGACTTTCTCGTATTTTGCAGTCAACTTTTTTTTACTGTTCCTCCTCGATTCCTTGTATGCTTTCTTTGGCATCCCTAACAGTATCTTTATGGTTAGGCCTTGTTTAGTTCCAAAAATTTTTGCCTAAAAACGTCACATAGAATCTTAATCTTTGAACATATGCATGGAGCATTAAATATAGATAAAAAAAACCAATTACACAGTTTATATGAAATCGCGAGACAAATCTTTTGAGCCTAAGAGCAAGTTTAATAGTATAGCCAACTACTAGCTCCAATTCCTCATAGCCAATCTAATAGCTCATTTATACAATAATTACATACTACACTATTAATACTTAGTTCCACCTGCCATACACACATTGTGTCTTGGAATCCGTGCTACAGCTGGCTACAAATCTGTAGCCCGCTGCTCTTCTCTCTCCTCATTTATCTCCTTAAAATATATTTGCAGCTGGCTTATAGCCTGCTATTGCACCTGCTCTAATTAGTTCGTGATTAGCCATAAGTGTTACAGTAACCCACATGTACTAATGACGGATAAATTAGGCTTAATAAATTCGTCTCGCGGTTTCCAAACGAGTTATGAAATTAGTTTTTTCATTTGTGTCCAAAAACCCCTTCGACATTCGGTCAAACGTCCGATGTGACACAAAAAAATTTCTTTTCGCGAACTAAACACACACTTAGTTTACGAGTTGTAAGTTACTCCCTCCATTTCACAATGTAAGTCATTCTAGCATTTCCCACATTCATATTGATGTTAATGAATCTATATAGTGAATGACTTAAATNGTGAAACGGAGGAAGTAAGTAACATAAAGGCTTTTGAAGTTTTTATATATTTTAGGGTAAAGGTCTGATATCAAGATAGTTTCGTCAACCTGTCCAATAAATTTTGTATTTCTGCCACACTTTAATTTAGGGGTTATTCAGATTATAGCCAAAATAAACCTTACCAAATTTTGCTAAAATTTTGGTAAGTTGACAATATTACCAAAGTTTGGTGAAAAAAACTAAATGTATGTACATCTTTGACAATATTATAAAAAATAGTATAATTTAAAATGACACCAATCTGAACAGCCCGTTAGTTCTTTTTGGGTTTGTTTTTGGGTGTGTGCAGCAGACTGTCTATGAATGCATTTCGTCCTTTTGGTCTGAAAAACAATAGCTGCACAGATATAAGTTAAGCTTGCTTCCGGAAGTTAGTGACTTATACCACAGGTGTTTTCATGTTTTCAATATTTCTATGAAATGTTTATAATTCTTTTAACACTTTGCTTTTATTTTTTAAGAAAAAAATGTGTTATCATATTTTAACATGTTTTGTACAAAATTATTTTCATATTATTAAATCTTCTTATAAATTTCAGCTTGTGAACATGTAAGGAGTTCCACTTCATGTTTTTCTTTAATTCATATACTTATTTATGTGGATAAACACGGTTTACCAATAACAATAATGCCAATAGACTAACATAACTGATCTGTGACGATTGTTCAAGTAATGAGTAATGGAAAACCTTTTTCCACGCCCAAAGAAAAAGCTAACACCAATCAACACCAGATCTTTGATTGGTTAGACTCTATTAGATTATGTTCTCCCCTGCGGGGTTGTATTTTAGTTTTTCCTTCTTTAAACATCAACATTTTTCTTCTTTTTATATAACTAGAAAAAATACACGTGCATTGCAACGGATGAAAACTATTTTAATCTTTTATACGATTTAGTTAAGGTAAAATTCACTATAAAAAATTACTTGAATATATATTTTTCTAGAAAATCATGAGCTGCAATTAGGTCCAATCATCTCAAGTTAGCATGCGAGTTTTTTTAAAAAAGATTTCTTATACAACTCATTCTATATTTTCAAAATCGAACAAACTTAAAACCCGACTCAACTACGTTTCTGCATTTCCAAAAGCGAACGAACTTAAAAACCGATTTATACACGGATGATGTACCAAAATACCGACAAAAACATCTTTAATTTTTATAATAATAGAGATTAATATACATACTGTAGGGGCATACTGCGTTTAATTGAAAAAAAACTTCTGTGGAGGTGTAGACTATTTTCTGCTTTAATCATTTTCCATTTTATATGTTATGCTTTCCCTTTTATTTTCTATAATTTTTTTGGAAGAAAGGTGTAATAAAACACCATTTGGAAAAAAAAATATTACAGTTTTGGGGTCCAATATATTTTCATGTTTCTTCTTTCATGTGTCCCGGGTAAAATTATAAATACCTGTACTTCTTTTAATGTTTAGTTTGGTGATGTATGTTTTTAGAAGGGTTTAGTTTGATGATTTATGCTCCCATATGATTTGTTAATGCTGATTCTTTAGTTAATGGCTTCTACTGTACTAAGCCTTGCGCTGTCTAGGTTTTTTTATTGTTTCTTTTACACCTTGCCAATTATATTAAAAAATTGTAGGAAGAAGAAATGAAGAGACAAATTTTAGAAGAGAAGATTGCTGGGTTAGAACACCAGGCATCAGCAGATCGTCTTGAGAAAGTAGAGACACTGATAGGTACATCACCAGGACAATTATTCTTTTTCTTTTCTTGTGAATTTAAAAGATAAATCAGCATAGCAAACATATAAACCATTGTCTTTGTGATGAAGCGTATGATCAGATGAAACATGAACGAGACAATGCTGTGCGACAAGTGAACGAGCTGCGCGATCAGAGCACACACGCCATTCTCAAATTCTCCCGTTGTGACCTGGAACAAGCGACGGAGCATTTCACCGATGCCTGTAAGGTTGGTGATACTGAATATGGCCGCACATACAAAGCCATCATGCACGGTACCGAGGTGGCGATCAAGCTGTCCAGCACCGAGAGCTTATTTCAACAAGAGGTAATTAAATAAATTAACCTGGTCAAGTTATTATGATACTAGTGGGCATGTTTGGTACAGTTCCAACTCCTAAATTTAACTTCAGGAGTTGAGTCTGGAGTGGAGTTGTGGAGTCTAAACCCAGCTCCACAACTCTAGTTCATTTTGTGAGAGAGCTCCACCTAGCTCCACTTCCAGTTTTAGTGGAGCTGAAACTGTTTGGCTGAGCGGAGCTGTGCCAAACAGACCCTAATGGATAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAGCACATTTATCGGAGTATGCTCGAAAATCTCCGCCTTAGTGTACGAATGGTTACCAAACGGAAGAAACCTCGAGGACCACATCGTTTGCGCGAACAATTCAACACCTCTACCATGGCAAAACCGCACGCAGATCATCGGGGAGATCTGCTGCGCGCTGCTCTTCCTCCACTCGAACAACAAGAATCCTCCTACTGCTGCTTTGATCCATGGCGATCTCAGGCCTTGCAACATCCTCATCGACGACGACGCCAGCTACAGAAGCAGGCTCTGCAACGTCGGCCTATCGAGCCTGTTCTTGCAGCCCGGGACCTGCCCACCCAACCTGATGGAGAGGCTGCCGTACATGGACCCTGAGTTCATCACCACCGGGGAGCTCACAACACTCTCCGATGTGTATTCATTTGGTGTGATCATCCTACGGCTATTGACCGGGATGGCACCGTTGAATCTGTCCAAGAAAGTTGCAGCGGAATTGGAGAGTGATAACCTGCACAGGCTGATCGATAAATCTGCTGGAGACTGGCCTTACAAGGAGGCCAAACAGCTGGCTGTCCTTGGTGTTAGATGCGCTGAAATGGCAAGGGAGAAACGGCCCGATCTCTTGAACGATGTGTGGAGAGTCGTCAGGCCACTGATGAGGAAGCCCTCTTCTTGCCCGTACTTTCCACCGGCATCACCAGAAGTTTGTATCCCTGCTCCTTTCATCTGTCCGATCCTCATGGTAAATAAATAAATTTAAACTGATGATTTTTTTGCTTATCCGTTTTTTATAATGTTCTTGTCGAAAATGTTCAATGATGAAAAATTTTCTAGTGTGCATTTGTGACGACTCGTGTTGATATTTTCAGGAGATCATGAAAGATCCTCAAGTCGCATCTGATGGGTTCACCTATGAAGGAGAGGCCATAAGGAGGTGGTTTGATAGCGGGAATAATAGGTCTCCGATGACGAACTTGGTCCTTCCCGATCTCAAACTCATCCCTAATCGTGTCCTCCGTTCTTCCATCCATGAGTATCTTCGGCAGCAGAAACAACAGCAGCAGCAGGAGGAGGGTTCAGTCACCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012905

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA012905&oldid=57728"