BGIOSGA012962

From RiceWiki
Revision as of 09:55, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA012962| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012962, complete gene.| tag = B1168A0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA012962

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012962, complete gene.

LocusTag

B1168A08.6

Ensembl Transcript ID

BGIOSGA012962-TA

Ensembl Protein ID

BGIOSGA012962-PA

Length

2602

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:21908957..21911558

Sequence Coding Region

21908957..21909256,21910047..21911558

Genome Context

<gbrowseImage1> name=IndicaChromosome03:21908957..21911558 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:21908957..21911558 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCCGAGGCGACCACCTCGTCGTCCTCGTCCACCCACCACCCGCCCCACGCCACCGCGGCGGTCCCGGCCCCCGCCACGCGGCACGAAATCCAGGCGGCCATCGCCAAGGCCACCGAGCTGCGCGCGCTCCACGCCGCGCTCCTCCAGGGCCAGGGCGCCGCGGCGGCCAATGCCGGGAGCGCGTACAGCCGCAGCCCCGCCGCGTCGCTCATCCGCCTCCCGCCTGGCGCGTCGCCCGCGCTCTCCAAGGCCGCCGCCGCCGCCGTCGCCGAGGACTACCCCGTCTTCACTCCGACTTATGATGAAGAGGCACTTAGTGGAATGAATTATATTCGCCAAGACAACAGGAGCCTATCTGAGAACTGGAGCGGAATCGGCTTGGATCATGAAGGTCAGGAAGATGAGGTGGCTTTCTCAGATTTCGACAATCACAACACATTCTCTTCATCAAACAGTGAGCTCCACTTTTCTTCATCGAACGAGCATCGACGGAACAGAATGGGATGCAGAAACCATCCATCCTTCCTTCAGCCTGCTCTCTCCACCGACAGTTTCATCAAATCGGCTAGCAAGAGGACAGATTTGGCAGAATTCAAAGCTGTGACTACTTGCAACACCTGCAAGCCTGCAACAATCAGTAGGCACCCTGAAGCCGATGTCGATGCTCTCAAGAACCTCAGCAGTAGAGTGCCGCCGCAGTCAAATTACCACCCATCCATCTGCTCAAGGCCAAGGCAGAAGGGGCCACATATTCTCTCGTGGCTCTTACCCAAGTCAAAGAGGAAAGTGAAGTCGGACATGTCGCCAAACACCGTCGAATGCGAGAACATGTCACAGCTTCTTAAGGAATGGGGGGTGTTTTCTCTAGAATCTCTGAAAAAGGAGCTTGCTGAGGCCAATGAAAATAGGGATGCTGCTCTTCAAGAAGCTGCAGAGATGAAATCGTCGTTAGGAGAACTGACCACCAAGCTAGTGAGCTTGGAAGGGTACTGCTCGGAACTGAAGAAGGCTTTGAAGCAAGCGACCAGCACCAAGAACATGATATCTCACTCGAAAAGATCAGCTAGATCACTTGCTGTTAGTAGAGACAATTCTATGCCCGTCAGTCATGAAGTAATGGTGGAGGGTTTCTTGCAGATAGTATCAGAAGCTCGCCTTTCCATCAAACAGTTCTGCAAGGTATTAATCCAACAAGTTGAAGATGCTGACAACGGACTATCTGATAAGCTAAACTTACTCCTACAACCTTATCAAGTCACGCTAACCGACAAGCACCCGAAGGTAGTACTGTATCATCTCGAAGCTCTGATGAACCAAGCAATGTATCAAGATTTTGAGAACTGCACATTCCAGAAGAACGGGCCACCCAAGTATCTCGACCCAAAAGAAGATCGTCAGGAGAACTTTGCTTCATTTGTTGCGCTTCGCAACTTGAGCTGGAATGAAGTCTTGAAGAAGGGCACCAAGTACCACTGTGAGGACTTCAGCCGCTTCTGCGATCAGAAAATGAGCTGCATTGTCTCCATGCTGAACTGGTCATGGCCATGGGCAGAGCAGCTGCTGCAGTGCTTCTTTGTGGCTTCCAAGTGCATCTGGTTGCTCCACCTGCTGGCATTCTCATTCAGCCCACCTCTGGTGATATTGCGCGTCGAGGAGAACCGGGCATTCGATCAGATGTACATGGAAGACATCCATCTTGACAAGCAAAGGTCACAGAACCCTTGCCAAGTAAAGATCATGGTGACTCCCGGGTTTTATGTCCAAGATCGGGTGCTCAAATGCAGGGTACTCGGCAGGTACAGCTAG</cdnaseq>

Protein Sequence

<aaseq>MAAEATTSSSSSTHHPPHATAAVPAPATRHEIQAAIAKATELRALHAALLQGQGAAAANAGSAYSRSPAASLIRLPPGASPALSKAAAAAVAEDYPVFTPTYDEEALSGMNYIRQDNRSLSENWSGIGLDHEGQEDEVAFSDFDNHNTFSSSNSELHFSSSNEHRRNRMGCRNHPSFLQPALSTDSFIKSASKRTDLAEFKAVTTCNTCKPATISRHPEADVDALKNLSSRVPPQSNYHPSICSRPRQKGPHILSWLLPKSKRKVKSDMSPNTVECENMSQLLKEWGVFSLESLKKELAEANENRDAALQEAAEMKSSLGELTTKLVSLEGYCSELKKALKQATSTKNMISHSKRSARSLAVSRDNSMPVSHEVMVEGFLQIVSEARLSIKQFCKVLIQQVEDADNGLSDKLNLLLQPYQVTLTDKHPKVVLYHLEALMNQAMYQDFENCTFQKNGPPKYLDPKEDRQENFASFVALRNLSWNEVLKKGTKYHCEDFSRFCDQKMSCIVSMLNWSWPWAEQLLQCFFVASKCIWLLHLLAFSFSPPLVILRVEENRAFDQMYMEDIHLDKQRSQNPCQVKIMVTPGFYVQDRVLKCRVLGRYS</aaseq>

Gene Sequence

<dnaseqindica>1..300#1091..2602#ATGGCGGCCGAGGCGACCACCTCGTCGTCCTCGTCCACCCACCACCCGCCCCACGCCACCGCGGCGGTCCCGGCCCCCGCCACGCGGCACGAAATCCAGGCGGCCATCGCCAAGGCCACCGAGCTGCGCGCGCTCCACGCCGCGCTCCTCCAGGGCCAGGGCGCCGCGGCGGCCAATGCCGGGAGCGCGTACAGCCGCAGCCCCGCCGCGTCGCTCATCCGCCTCCCGCCTGGCGCGTCGCCCGCGCTCTCCAAGGCCGCCGCCGCCGCCGTCGCCGAGGACTACCCCGTCTTCACTCCGGTGAGCAATCTCTCTCTCTCTCTCTATATATATATCTTCAGCTTTCGTTTCTTCTTCTCCAATCGAGGAGCGTGAGAAGTGGTCACTTTGGTGGTTGATTTTGCCTGTTCTGCTAGTCTGCTTGCCATCCCATTTTTCTTAACTTTTTTGCAACTATGCTATGCTAAGTTGCGGGAATCGGGATCTGCTTGTTCATCTTTCTGTGAGGATTATATTGTGTAGACTGTTGCTTTCTCGTTCATCTTTATGTGAGGATTATATTGTGTAGGCTTGGTTGCTTTCTTTCTCTTTTTTTTTAAAAAAGAAGAAATAATTGTAGGTTTGGTTGCTATATTGTGTAGGTTTGGTTGCTTTCTTTTTCTTTTTTTTTAAGAAGAAAAGATAATTGTAGGTTTGGTTGCTAATTACTGGTACTGCTCTTCTCAAGCACCATTTGAGATTAAAACTTGCTCCCTATACTAGAGCTTATCTTTAGGTTTTATTGATGAATGATGAACCTTGGTGTGTAAATCAATGCTTAAACTTTGTTGCCGTGTTGGTGCACCGTGCGCGTACTTTCTACCAAGCTGATTTTTGTGAAACGAGCTGATTCCTCAGTAGTACGTAGTACTGTATTTATTAAGCTGTTACTCTATGTTTGCACTAACTTGGCATGAATCATGGACTCCGCTGCCTCTTCTTGGAATCTGACCTTTTTCATGGGTCATGTTAATATTCTGAATGTTTTGTTTGCTTCCTGATTCATCATCTGACAACTAAAAATTGTTTCTTATTTGGTGGATTCCTTCAGACTTATGATGAAGAGGCACTTAGTGGAATGAATTATATTCGCCAAGACAACAGGAGCCTATCTGAGAACTGGAGCGGAATCGGCTTGGATCATGAAGGTCAGGAAGATGAGGTGGCTTTCTCAGATTTCGACAATCACAACACATTCTCTTCATCAAACAGTGAGCTCCACTTTTCTTCATCGAACGAGCATCGACGGAACAGAATGGGATGCAGAAACCATCCATCCTTCCTTCAGCCTGCTCTCTCCACCGACAGTTTCATCAAATCGGCTAGCAAGAGGACAGATTTGGCAGAATTCAAAGCTGTGACTACTTGCAACACCTGCAAGCCTGCAACAATCAGTAGGCACCCTGAAGCCGATGTCGATGCTCTCAAGAACCTCAGCAGTAGAGTGCCGCCGCAGTCAAATTACCACCCATCCATCTGCTCAAGGCCAAGGCAGAAGGGGCCACATATTCTCTCGTGGCTCTTACCCAAGTCAAAGAGGAAAGTGAAGTCGGACATGTCGCCAAACACCGTCGAATGCGAGAACATGTCACAGCTTCTTAAGGAATGGGGGGTGTTTTCTCTAGAATCTCTGAAAAAGGAGCTTGCTGAGGCCAATGAAAATAGGGATGCTGCTCTTCAAGAAGCTGCAGAGATGAAATCGTCGTTAGGAGAACTGACCACCAAGCTAGTGAGCTTGGAAGGGTACTGCTCGGAACTGAAGAAGGCTTTGAAGCAAGCGACCAGCACCAAGAACATGATATCTCACTCGAAAAGATCAGCTAGATCACTTGCTGTTAGTAGAGACAATTCTATGCCCGTCAGTCATGAAGTAATGGTGGAGGGTTTCTTGCAGATAGTATCAGAAGCTCGCCTTTCCATCAAACAGTTCTGCAAGGTATTAATCCAACAAGTTGAAGATGCTGACAACGGACTATCTGATAAGCTAAACTTACTCCTACAACCTTATCAAGTCACGCTAACCGACAAGCACCCGAAGGTAGTACTGTATCATCTCGAAGCTCTGATGAACCAAGCAATGTATCAAGATTTTGAGAACTGCACATTCCAGAAGAACGGGCCACCCAAGTATCTCGACCCAAAAGAAGATCGTCAGGAGAACTTTGCTTCATTTGTTGCGCTTCGCAACTTGAGCTGGAATGAAGTCTTGAAGAAGGGCACCAAGTACCACTGTGAGGACTTCAGCCGCTTCTGCGATCAGAAAATGAGCTGCATTGTCTCCATGCTGAACTGGTCATGGCCATGGGCAGAGCAGCTGCTGCAGTGCTTCTTTGTGGCTTCCAAGTGCATCTGGTTGCTCCACCTGCTGGCATTCTCATTCAGCCCACCTCTGGTGATATTGCGCGTCGAGGAGAACCGGGCATTCGATCAGATGTACATGGAAGACATCCATCTTGACAAGCAAAGGTCACAGAACCCTTGCCAAGTAAAGATCATGGTGACTCCCGGGTTTTATGTCCAAGATCGGGTGCTCAAATGCAGGGTACTCGGCAGGTACAGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012962