BGIOSGA013010

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Revision as of 09:55, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013010| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013010, complete gene.| tag = OsI_123...")
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Gene Name

BGIOSGA013010

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013010, complete gene.

LocusTag

OsI_12359

Ensembl Transcript ID

BGIOSGA013010-TA

Ensembl Protein ID

BGIOSGA013010-PA

Length

3919

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:24070407..24074325

Sequence Coding Region

24070407..24070763,24071199..24074051,24074140..24074325

Genome Context

<gbrowseImage1> name=IndicaChromosome03:24070407..24074325 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:24070407..24074325 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGGCCTGATTTCTTCAGGAATCATCAAGTGGACGGCAAGCAAGCTTTCTTCACTGGTTTCGGCATCACCTGGAGCATCAGCATCCAATGAGCAGAGTTCTGCACTCAGGGATGTGAGGACGCTGCAGAGGACGATGGCGAGGATCCAGCGCACGCTTGCTACCACCGATGAGCACAGCATCAGAGATGCATCTGAGAGGCTTCACCTGAGGGAGCTTCAGCAGTTTGCCTACGATGCCCAAGATGCAATCGATCTGTACAAGTTTGAGCTTCTGCGGCGAAGGATGGATGATCCAAACAGTCATGGAGATGGCGGCAGTAGCCGTAAACGCAAGCACAAGGGGGACAAGAAGGAACCTGAAACTGAACCGGAGGAAGTTTCAATTCCTGATGAATTGACTGTCCGGGTAAGAAAAATCCTAGAAAGATTTAAGGAGATCACAAAGGCATGGGATGATCTCCGTCTGGATGATACAGATACAACAATGCAAGATGAGGAACATAGCATGCTCCCACTGCCTACTACCCCATATGTTGACGAGCCCACTATCTTTGGTAGAGATGAAGATAAGGAAAAGATAATCAAAATGCTGCTCTCTGTGGGTGGTGCCAATGAAGGAGATGTGTCAGTTCTTCCCATTATTGGAATGGGTGGAGTAGGAAAGACAGCACTTGTTCAACTAGTGTACAATGATCGAAGGATTCTGAACAGATTTGACTTGATGGGCTGGGTTCATGTCTCAGAGAATTTTGATCTCAAAAGCATAATGCGTAAAATTATCATGTCCTTCACGAAAAAACCATGTCAGATGACACAAATGGATCAGCTCCAGTATATGCTAATAGAACAAGTTGTTGGCAGAAAGTTCTTGCTGGTTCTTGATGATGTGTGGAATGAGAGGAAGGATATTTGGGATGCATTATTATCAGCCATGTCACCTGCACAATCAAGCATAATATTGGTAACTACCCGCAATACAAGTGTGTCAACAATAGTCCAGACAATGCACCCCTACAATGTGAGTTGCCTACCTTTTGAGGAATCCTGGCAACTATTCAAGCAGATGGCCTTTTTGCACCAAGATGAGAGTATGAAAACAGATTTTGAGGTTATTGGCAGAAAAATTATTCAGAAATGTGCTGGCTTGCCTTTAGCAGTGAAGGCAATTGCCAGTGCACTTCGCTTTGAGGAAAATGAGGAGAAATGGAATGACATATTGGAGAGTGAACAATGGGAGTTACCAACAACAGAGGATACTGTGTTACCGGCGTTAAAATTAAGCTATGATCAAATGCCAATCCACTTAAAGCGGTGCTTTGTTTTCTTCGCATTATTCCCTAAGAGGCATGTTTTCTTGAAGGAAAATGTGGTATATCTGTGGATATCTTTGGGCTTCCTTAAACGGACCAGCCAGACAAACCTTGAGACTATTGCAAGGTGCCTTAATGACTTGATGCAGAGGACTATGGTTCAGAAAATACTATTTGATGGAGGACATGATTGCTTCACCATGCATGACCTTGTACATGATCTTGCCGCGTCCATCTCATATGAAGATATTTTGAGAATAGACACTCAACACATGAAGTCTATGAATGAAGCATCAGGAAGCCTTAGGTATTTATCTCTGGTTGTGAGTTCTTCAGACCATGCGAATTTGGATTTGCGTACATTACCAGTGTCAGGAGGTATCAGGATATTTCAAGTTGTAAATTCTATGGATGACAATAGAAGATATTTTTCATCCTTCTTCAAAAATAACAGAAGATGCTTCTCCAAGTTGTTCTCACATCACATTAACCTTACAATTGATAATGAGCTATGGAGCAGTTTTCGGCATTTGAGAACTTTAGACTTAAGCCGCAGCTCAATGATAGCATTGCCTGATTCAATTAGAGAACTGAAGTTGCTCAGGTATCTAAGTATTTTCCAAACAAGAATCTCCAAGCTCCCAGAATCAATTTGTGACCTCCTTAATTTGAAGATCTTAGATGCAAGAACAAACTTTCTTGAAGAGCTACCACAAGGCATTCAGAAGCTGGTCAAGCTCCAGCATCTCAATTTAGTCCTCTGGTCTCCCCTGTGCATGCCAAAAGGAATTGGAAATCTGACCAAACTACAAACCTTGACAAGGTATAGTGTTGGAAGTGGCAATTGGCACTGCAATATTGCTGAACTACATTACTTAGTGAATATCCATGGTGAATTGACCATTACAGGATTAGGTAGAGTGACCAAAGTTGATGATGCTCAAACAGCCAACCTGATTAATAAAGAACATGTGCAAACTCTAAGATTAGATTGGTCTGATGGATTCTACTCTAGTGAATGTGATCATAATTCTAGTCATATAGATGTAAAAGCAACACCAGAATTAGCAGAGGAGGTATTTGAGAGCTTAAAGCCAACTAGCAACTTGGAGGAGTTAGAGGTAGCTGACTATTTTGGGTACAAATACCCAAGTTGGTTTGGAGGTTCTGCCTATTCACAATTGGCCAAGATAACTTTATGGAAGCAAGGCTGCAAGTTCCTTCCAACACTTGGCCAGTTACCTCAGTTGCGTAAACTTGTAGTTATACGCATGGAGGAAGTAGAGAGAATCGGGCAGGAGTTTCATGGCGAGAATTCCACAAATCGATTCCCAGTATTGGAGGAATTGGAGTTTGAGAACATGCCGAAATGGGTGGAGTGGACTGGAGTTTTTGATGGTGACTTCCCTTCACTTCGTGAGCTGAAAATCAAGGACAGCGGTGAATTGAGAACCCTTCCACATCAATTATCATCCTCTTTGAAAAAATTGGTCATCAAGAAATGTGAAAAGCTGACAAGACTGCCAACTATTCCCAACCTAACAATCTTACTTTTGATGGGCAATCTTAGCGAAGAAATACACAATAGTCTGGATTTTCCAATGCTCCAAATATTAAAAGTGTGTTTCACGCAAAAACTTGTGTGCCTTGAACTTGACAATAAGAACCTACCAATCCTGGAGGCACTAGCTATAAGTGGATGCCGGGGGCTATTTTCTGTGGTAGGATTGTTCAGCCTTGAATCCCTCAAGCTTCTAAAAATAAAAGATTGCCCAAACCTGCAGTGCCCTTTACAACCACTTCAACAGCAGCTTCAGCAATGTATTATCACGAACTGTCCTCAATTACAGGAATGGATTGAGTGGCAACAGTCACTAATAGACAAGGAAGATAAGCAACCAGAATTTGATAATGCAAGTTATGATCAAGAGGCTCTTGGTGCACTGAGCGACAATAGTGAGGATGATGTTGAAGTTTTCAATGAAGATGAAGATGACGATTTCTATGATGAAATGCTAGAAGTTGGGCAGTCAAGCGGGACAGCAATTAATGACGATGATGGAAGTAACGATGCTGTTTGA</cdnaseq>

Protein Sequence

<aaseq>MAGLISSGIIKWTASKLSSLVSASPGASASNEQSSALRDVRTLQRTMARIQRTLATTDEHSIRDASERLHLRELQQFAYDAQDAIDLYKFELLRRRMDDPNSHGDGGSSRKRKHKGDKKEPETEPEEVSIPDELTVRVRKILERFKEITKAWDDLRLDDTDTTMQDEEHSMLPLPTTPYVDEPTIFGRDEDKEKIIKMLLSVGGANEGDVSVLPIIGMGGVGKTALVQLVYNDRRILNRFDLMGWVHVSENFDLKSIMRKIIMSFTKKPCQMTQMDQLQYMLIEQVVGRKFLLVLDDVWNERKDIWDALLSAMSPAQSSIILVTTRNTSVSTIVQTMHPYNVSCLPFEESWQLFKQMAFLHQDESMKTDFEVIGRKIIQKCAGLPLAVKAIASALRFEENEEKWNDILESEQWELPTTEDTVLPALKLSYDQMPIHLKRCFVFFALFPKRHVFLKENVVYLWISLGFLKRTSQTNLETIARCLNDLMQRTMVQKILFDGGHDCFTMHDLVHDLAASISYEDILRIDTQHMKSMNEASGSLRYLSLVVSSSDHANLDLRTLPVSGGIRIFQVVNSMDDNRRYFSSFFKNNRRCFSKLFSHHINLTIDNELWSSFRHLRTLDLSRSSMIALPDSIRELKLLRYLSIFQTRISKLPESICDLLNLKILDARTNFLEELPQGIQKLVKLQHLNLVLWSPLCMPKGIGNLTKLQTLTRYSVGSGNWHCNIAELHYLVNIHGELTITGLGRVTKVDDAQTANLINKEHVQTLRLDWSDGFYSSECDHNSSHIDVKATPELAEEVFESLKPTSNLEELEVADYFGYKYPSWFGGSAYSQLAKITLWKQGCKFLPTLGQLPQLRKLVVIRMEEVERIGQEFHGENSTNRFPVLEELEFENMPKWVEWTGVFDGDFPSLRELKIKDSGELRTLPHQLSSSLKKLVIKKCEKLTRLPTIPNLTILLLMGNLSEEIHNSLDFPMLQILKVCFTQKLVCLELDNKNLPILEALAISGCRGLFSVVGLFSLESLKLLKIKDCPNLQCPLQPLQQQLQQCIITNCPQLQEWIEWQQSLIDKEDKQPEFDNASYDQEALGALSDNSEDDVEVFNEDEDDDFYDEMLEVGQSSGTAINDDDGSNDAV</aaseq>

Gene Sequence

<dnaseqindica>1..357#793..3645#3734..3919#ATGGCTGGCCTGATTTCTTCAGGAATCATCAAGTGGACGGCAAGCAAGCTTTCTTCACTGGTTTCGGCATCACCTGGAGCATCAGCATCCAATGAGCAGAGTTCTGCACTCAGGGATGTGAGGACGCTGCAGAGGACGATGGCGAGGATCCAGCGCACGCTTGCTACCACCGATGAGCACAGCATCAGAGATGCATCTGAGAGGCTTCACCTGAGGGAGCTTCAGCAGTTTGCCTACGATGCCCAAGATGCAATCGATCTGTACAAGTTTGAGCTTCTGCGGCGAAGGATGGATGATCCAAACAGTCATGGAGATGGCGGCAGTAGCCGTAAACGCAAGCACAAGGGGGACAAGAAGGTACCACCAGTTCTTCGATCTCCTGTGATTTTTCTTTTCCTTTTCCGTTTGATTCATCAGAAAAGTTTTGCAGATTTACCATTTTAGTGAAATGCAAGCATGTGGATGGTTGGTCTAATTACTCATGTTACCATAGGTAGACAATATTGATTCTTGAAGTATATTGACATATTCCATTATCTCTAACATAAGAATCATCGATAAAACCGTTGCTAGTCTGCAGCTGTTGTCATGTCAACTACAGTGAAATAAATGAGCTAGGTAAAAACATGGGATTGAATGATTGTAATAATTTAATGAAGAAATTATCAAATAAAAAATAAATTTATAAAAAATGGTTTTATAAATGGTTTTATAAATAAAAGGCACTTTCTACAAGCAACTTACTAGAAAAATATTATTTTCTATTTTTTTATTCAAGTATTTTATCTCCAGGAACCTGAAACTGAACCGGAGGAAGTTTCAATTCCTGATGAATTGACTGTCCGGGTAAGAAAAATCCTAGAAAGATTTAAGGAGATCACAAAGGCATGGGATGATCTCCGTCTGGATGATACAGATACAACAATGCAAGATGAGGAACATAGCATGCTCCCACTGCCTACTACCCCATATGTTGACGAGCCCACTATCTTTGGTAGAGATGAAGATAAGGAAAAGATAATCAAAATGCTGCTCTCTGTGGGTGGTGCCAATGAAGGAGATGTGTCAGTTCTTCCCATTATTGGAATGGGTGGAGTAGGAAAGACAGCACTTGTTCAACTAGTGTACAATGATCGAAGGATTCTGAACAGATTTGACTTGATGGGCTGGGTTCATGTCTCAGAGAATTTTGATCTCAAAAGCATAATGCGTAAAATTATCATGTCCTTCACGAAAAAACCATGTCAGATGACACAAATGGATCAGCTCCAGTATATGCTAATAGAACAAGTTGTTGGCAGAAAGTTCTTGCTGGTTCTTGATGATGTGTGGAATGAGAGGAAGGATATTTGGGATGCATTATTATCAGCCATGTCACCTGCACAATCAAGCATAATATTGGTAACTACCCGCAATACAAGTGTGTCAACAATAGTCCAGACAATGCACCCCTACAATGTGAGTTGCCTACCTTTTGAGGAATCCTGGCAACTATTCAAGCAGATGGCCTTTTTGCACCAAGATGAGAGTATGAAAACAGATTTTGAGGTTATTGGCAGAAAAATTATTCAGAAATGTGCTGGCTTGCCTTTAGCAGTGAAGGCAATTGCCAGTGCACTTCGCTTTGAGGAAAATGAGGAGAAATGGAATGACATATTGGAGAGTGAACAATGGGAGTTACCAACAACAGAGGATACTGTGTTACCGGCGTTAAAATTAAGCTATGATCAAATGCCAATCCACTTAAAGCGGTGCTTTGTTTTCTTCGCATTATTCCCTAAGAGGCATGTTTTCTTGAAGGAAAATGTGGTATATCTGTGGATATCTTTGGGCTTCCTTAAACGGACCAGCCAGACAAACCTTGAGACTATTGCAAGGTGCCTTAATGACTTGATGCAGAGGACTATGGTTCAGAAAATACTATTTGATGGAGGACATGATTGCTTCACCATGCATGACCTTGTACATGATCTTGCCGCGTCCATCTCATATGAAGATATTTTGAGAATAGACACTCAACACATGAAGTCTATGAATGAAGCATCAGGAAGCCTTAGGTATTTATCTCTGGTTGTGAGTTCTTCAGACCATGCGAATTTGGATTTGCGTACATTACCAGTGTCAGGAGGTATCAGGATATTTCAAGTTGTAAATTCTATGGATGACAATAGAAGATATTTTTCATCCTTCTTCAAAAATAACAGAAGATGCTTCTCCAAGTTGTTCTCACATCACATTAACCTTACAATTGATAATGAGCTATGGAGCAGTTTTCGGCATTTGAGAACTTTAGACTTAAGCCGCAGCTCAATGATAGCATTGCCTGATTCAATTAGAGAACTGAAGTTGCTCAGGTATCTAAGTATTTTCCAAACAAGAATCTCCAAGCTCCCAGAATCAATTTGTGACCTCCTTAATTTGAAGATCTTAGATGCAAGAACAAACTTTCTTGAAGAGCTACCACAAGGCATTCAGAAGCTGGTCAAGCTCCAGCATCTCAATTTAGTCCTCTGGTCTCCCCTGTGCATGCCAAAAGGAATTGGAAATCTGACCAAACTACAAACCTTGACAAGGTATAGTGTTGGAAGTGGCAATTGGCACTGCAATATTGCTGAACTACATTACTTAGTGAATATCCATGGTGAATTGACCATTACAGGATTAGGTAGAGTGACCAAAGTTGATGATGCTCAAACAGCCAACCTGATTAATAAAGAACATGTGCAAACTCTAAGATTAGATTGGTCTGATGGATTCTACTCTAGTGAATGTGATCATAATTCTAGTCATATAGATGTAAAAGCAACACCAGAATTAGCAGAGGAGGTATTTGAGAGCTTAAAGCCAACTAGCAACTTGGAGGAGTTAGAGGTAGCTGACTATTTTGGGTACAAATACCCAAGTTGGTTTGGAGGTTCTGCCTATTCACAATTGGCCAAGATAACTTTATGGAAGCAAGGCTGCAAGTTCCTTCCAACACTTGGCCAGTTACCTCAGTTGCGTAAACTTGTAGTTATACGCATGGAGGAAGTAGAGAGAATCGGGCAGGAGTTTCATGGCGAGAATTCCACAAATCGATTCCCAGTATTGGAGGAATTGGAGTTTGAGAACATGCCGAAATGGGTGGAGTGGACTGGAGTTTTTGATGGTGACTTCCCTTCACTTCGTGAGCTGAAAATCAAGGACAGCGGTGAATTGAGAACCCTTCCACATCAATTATCATCCTCTTTGAAAAAATTGGTCATCAAGAAATGTGAAAAGCTGACAAGACTGCCAACTATTCCCAACCTAACAATCTTACTTTTGATGGGCAATCTTAGCGAAGAAATACACAATAGTCTGGATTTTCCAATGCTCCAAATATTAAAAGTGTGTTTCACGCAAAAACTTGTGTGCCTTGAACTTGACAATAAGAACCTACCAATCCTGGAGGCACTAGCTATAAGTGGATGCCGGGGGCTATTTTCTGTGGTAGGATTGTTCAGCCTTGAATCCCTCAAGCTTCTAAAAATAAAAGATTGCCCAAACCTGCAGTGCCCTTTACAACCACTTCAACAGCAGCTTCAGCAATGTATTATCACGAACTGTCCTCAATTACAGGAATGGATTGAGTGGCAACAGTCACTAATAGACAAGGAAGATAAGGTAAGAGCATTTTTTTTTATCTGTGCTTTCTTTGTGCCTTTTGTTTTTTGTTTTCTTCACTGAAATTGATGTATTTTATCCTCAGCAGCAACCAGAATTTGATAATGCAAGTTATGATCAAGAGGCTCTTGGTGCACTGAGCGACAATAGTGAGGATGATGTTGAAGTTTTCAATGAAGATGAAGATGACGATTTCTATGATGAAATGCTAGAAGTTGGGCAGTCAAGCGGGACAGCAATTAATGACGATGATGGAAGTAACGATGCTGTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013010