BGIOSGA013021

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Revision as of 09:55, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013021| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013021, complete gene.| tag = OsI_123...")
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Gene Name

BGIOSGA013021

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013021, complete gene.

LocusTag

OsI_12387

Ensembl Transcript ID

BGIOSGA013021-TA

Ensembl Protein ID

BGIOSGA013021-PA

Length

5706

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:24332290..24337995

Sequence Coding Region

24332290..24332415,24332507..24332607,24334403..24334500,24335160..24335212,24336796..24336893
,24337250..24337336,24337473..24337615,24337958..24337995

Genome Context

<gbrowseImage1> name=IndicaChromosome03:24332290..24337995 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:24332290..24337995 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAGCGGCAGCATCGTGAAGAAGGAGGTCGGCGAGAACCACGACGTGCTCCGCTTCGGCGTCAACAACAGCGTCAAGGGCGACCTCGCGCCGCAGCACCCGATCCAGGCCACCGTCCACAAGGAGGCCAGGTTCTGGGCGGATAAGAAGAGGTTCGGGGCGGAAGCCATCTACGGATCTGCTTTCAACATCCGCAAGGATCTCAATGCCCAAATCCTCTCCAAGTTCCAAAGGCCCCCTGGTGCATTGCCATCATCTATGCTAGGATACGAGGCGCTGACTGGTTCCTTGGATGATTTCGGGTTTGAAGATTATCTCAACTTGCCCCAAGATTCTGACAGCTTCCATGCTCCAGACATGCACCACGGAATGGAGGGGATATCATTTGGCTATCTGGGCCTGTTTGGCAGAGCTTCAGAGCATCCTGGCTATAAAATTGTTAGAGGTCAAGCTAGCGGTAGACTGGGGTGTTGGCATGCCGAAAGTGCCAACCTCTCCCTTGTATCTTACCCCAAATTGGCCGCCATGCCTAGTCTTACCACTCAACTTCATGCAGTACACTCAGATGAAATGTTGGAATCGTCAAAGTCCACTATTTTTGTAGAAGCAAATGGTATGTACTCCGACAAAGCTGATTCACTATCAACAGTGTACACCTTGAACAACAAATGCATCAATGCTTATTTCCCAAAGACACATACAGATCAGCAGGGGAAGGGAGACATCAAAGATTCTGACTGA</cdnaseq>

Protein Sequence

<aaseq>MASGSIVKKEVGENHDVLRFGVNNSVKGDLAPQHPIQATVHKEARFWADKKRFGAEAIYGSAFNIRKDLNAQILSKFQRPPGALPSSMLGYEALTGSLDDFGFEDYLNLPQDSDSFHAPDMHHGMEGISFGYLGLFGRASEHPGYKIVRGQASGRLGCWHAESANLSLVSYPKLAAMPSLTTQLHAVHSDEMLESSKSTIFVEANGMYSDKADSLSTVYTLNNKCINAYFPKTHTDQQGKGDIKDSD</aaseq>

Gene Sequence

<dnaseqindica>1..126#218..318#2114..2211#2871..2923#4507..4604#4961..5047#5184..5326#5669..5706#ATGGCGAGCGGCAGCATCGTGAAGAAGGAGGTCGGCGAGAACCACGACGTGCTCCGCTTCGGCGTCAACAACAGCGTCAAGGGCGACCTCGCGCCGCAGCACCCGATCCAGGCCACCGTCCACAAGGTACCCGTCGCTGCTTCCCCTCTCCTCGCCCCCTCGAAAACCCTAACGCGCTGAATCCGGGTGATTGGTGGTGGGGCTTGCCCACGCGCAGGAGGCCAGGTTCTGGGCGGATAAGAAGAGGTTCGGGGCGGAAGCCATCTACGGATCTGCTTTCAACATCCGCAAGGATCTCAATGCCCAAATCCTCTCCAAGTAATTTCACTATCCTATCCCCCCATATGATCTATCCCCCCATATGATTTCGCTTGGAAAACAATTTGTTCGAGTAAATAATCACTTGCGGTTCATGTTAACATTAGATAACTGTGTCGGTATTACATAGCATATATTGGAATTGTTAGGGTCAATGACAATTTTGGGTGGAATTCCTCAAACTCAAATGGCCTTATTGTGGGACGAGATATGTTTCTTTGAATTTGATGATGGCATGTATTCCCCCTGTGTTTGTCTGTTAGATAACCCTCGCAGTACATAAAAAAAAAAACCTCGCATTTACATAATTTTCTGTAGGCTTCAATTAAAAAATAAACTCAAGGTCTCGAAGGATCAAATTAAATATGTACAAATGAAAAACCCCAAACAACCAGACGTTACGTAATCATTAGCATGCAAATCAAACGGGAAATTAGGGGATTTCGTGGGTTAGGGAAAATAATCTCACCCGATCGCTCGCTGGCTCATTGTTGCTTCTCATGAGACACCAGCCATCGCACTTGCTGTGTTTGTGCGTCTACCCGAGGACAGTACAAGGCAAAGAGACAAACCAACAAACAAGTTAGTTTCAGGTTGCGATAACAGGCATGTTAGCTGCTGTTGTGTCGGGTACTCGGATATTGTTTATGGGTTGAGCAAGAGAGCAAATAATGGACCAATTATGTCTGAGTATTGGTGTCAACAGACAAGGTTCTCTGGCGTCACCCATGAGAGAATAGAATAGAGCACTTGGAACAGGCCAAAGCCATTGGTATCATGTGACACCACTGCTATAACGTTGGATCCACCCCTGTTTTGTGTGTCTAGTTGTAAATCCGTTAGCTCTTTGCATTTACTGCAACTATTTTGCTCTTATTGTCGTATGCATCAAGTGTCAGTGATGTTATGTTTTGTGGTCATCAGCGGTATTCTGCTAACTGTTACTCCCTACATTCTAAAATATAAGTCACAACCACCTTTAACCTAAAGACCAAAAAACAATAATCACCTCATTGTTTGAATCATCATAATAAATACTAATGCATGCACCCTATAGAATTAGAGATCTTGAGGGTGAAGGATTTAAGAAATAATAATTTAGTGGAGAGGAGGTGCTAGTTAACAGCCTCATCTTTTGGCTTATGCTTATGTTTATAAGCCAAAAATTGAATTTTCAACCTTAAATTTGGAATTGATTTTGGGGTTTTTTCATCATAGTTTATTTTCCAGCCTTTGTCTTTTAGATCGCTAAAAACACGGATATAAAAAATTTATTTGCAAATTATTTTCTGTTTGCAAATATGCCGTTTCACTTATTCTGTCAATAAGCAAAACGATGGGGGTCCTAATTTCAATGCATGCATGCACACCTTGTATAATGAAACGTGAAAAAAAGTAGTTGTGCCGTATATTTTAGAATGGAGGTAGTAGTTTGCAAGTTATTTTTGAAATTTGTTCTCGTGGCTATGTGCAGTATTTTGAGCACTGTTTTTAAGGTGTTTAATTAGGTCCTGTTTCTTCAAGAGCATTTCCACAAATCAAATATTAGGACTGCTAAGAATGTATTAATGCTTTGAGTATGCTAACATGGATGGAATGTCTGGATTCCTTGGTCTGGTTGAATACACAATCATATCTTGAGGTTGCTCTTGTTTGTCTCTCCGTCTCTCCGATGTAGTAACAACTAACAACTAGCACATCAGCGCAACTGTGCAAATAAGGGAAAAACAGCGTGCGCAACTCATGCCCAGGCTAACATTAAAGATGTTTTGGTTGATGATTTATCTGTTTGCAGGTTCCAAAGGCCCCCTGGTGCATTGCCATCATCTATGCTAGGATACGAGGCGCTGACTGGTTCCTTGGATGATTTCGGGTTTGAAGATTATCTCAACTGTAAGGCTTGTTGTCCTTTGATTTCCTATGAATCTTCTTGCTGGCCTTTCACATTTACGTGCAACTATTTGCTCACCAACTTTTGCTGATTTATTAGCTGCATGTTTGATGCTTATGTTCTTCATTGGAATTATGGAATCCAGTGCTATCAAGTTCTCATTACCTTTATATTAATTCTAGTTTTTTTATTTTAGTAGACCAAAACCATGTAGTCTTATGATTCCTTGGGAGTTTAGAAGTTCTTGGGAAACCCAGGGTCATGAAATGATACTTGTTTTTCATTTTTCATACTTTTAGTCGGTACATCTTGATAAAATTTTGCTATTAGGATATACTTGGAGGAATGTATAATAATTATCACAAAGTGGTTATTTTATTCTGTCCTCATGATATGATATATTAACAGCAAGTACATATTTGCTTTGTCATCCAAGCTTGGTTGGCCTTACTTTGCATGGCAAAACATACATCTCATCACCATTTTCAGTGATGAGATGTATCACCAGAAATACAGCCTCTATAGACTATATATTTCAGTCCCACTTCTGCCCTGGGAACATTTTTTTTTCTTATTTACACTCGCTGAGTGTTCTTCCTGTTGTTGGAAATGTTACTTTAGCCTTGTGTTAATTTTCTTTTTACCTTGGATCATATTGCAGTGCCCCAAGATTCTGACAGCTTCCATGCTCCAGACATGCACCACGGAATGGAGGTTCGCCTTGGTTTGTCAAAGGGACCGATTTGCCCTAGTTTCAATTGATTTCACAAAATGTATTTCTCGTCTTGCACTGTTCTCCTCATTCAATATCTATGTCGCTCTTTAGACTGAGATTTCGATGCTTGTTTTGGTTCATAACCACACTTGTGACGAGATTCCTTATCCATCATGTAGACCTCACATGTCATTGAGATAAAAGAGTGTGACAAGAGTGTCTCATGCTAGCTAAAGTGTGGCTCCAATTTTGTTAGCCACACATTAGGCAAGTTTGTCAAAACATTGTGTCAACCTTGCATAAATAGAAATACTCAACCAAACAGTCTATTACGCTTATACACTGTCAAATCAAAATGGGACAGTTTCAGACTTTGGCCGTGGCTTCCATCCATCGTCAATGCTTCAAGTGTGGGGACTTCTTCAACAGCCCCATCCATTGTCGTACCATGTGGTTGATCTAATATAAAGGCATTCCGAGTTGAGCTATTTAAACAACCCAACTAAAATAGTACTCCCTCCATCTACTTTTGATAGACATATTTCTAAATCTGAAAAATTTACTTTTGATAGGCATATTTCAATTCAATCACCTATCCTCTTAATGACTTTCTATGATTTAATGTGTGACTCTCTATTCTTCCACACAAGATTGGCTACATGGGCATCGAGAAATGTAAATATTAATGAATTGCTTGTTTACGAGGAATAACCAGTAGCATGTTTAAATGGATGATAAGTAGAATTATTTTTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGCTGTGTAGTATGTACCATTCTTCAAGAAACATGAAAGTTCTCTATGTACTTCTTCGCTGTAGTTTCTAATGAAGCCCTCAACATTTTTATCCAATGTTTCACCCCAGAAGGATAGGCTGTTTTCCTCGTATGATTGTACCTCAGCAGCCTGAAAATACAATGTTAAAGATAAATTGGGATTCCAGAAAGTACTATAAATGTGCAGTGAAATCTTTATTCATACCTTTGCTGCCAGCCATACTCCTAGATTATATAAACAATATACAAATGTATGATGCAATTTTGATATCCTTTGCTTAGCGTTTTCCAGAGATGAACCATGTAGTTTTCTGTCCAGAGCTTCTATATGCTAAGAGAATGAAACAAAATTGCATTGGTATCTGGTAACATATATACACAGGATTTGTTAAAAGAAGTTACTTAAAGCATTACAAAAAGAATGTCAATGCATCTCAATAAAAAAAAACCTCCTGCTTAAAATATTGAATGTCATATTCAGCCCAAGCACAAGAAGCCATGAATAACAGGTCCATGGCATGCAATACTAAAGGTCTGGCACATGCTCTAACTAAAAAAAGAAGTCTAACAACAGGCTTAACAGTCTCTGAGACTGATAAATCATCACTAAAAACTGTCTTTTTGACCTAAACCGCATTTTAGAATTCACATACTTCTGTAGAACACTGGCTGTGCTACTGTAATAAACCCTAACTTTTTTATTCTTCATTTATATTCTGAAAGATGCCATTGATAGGTCCCACGTTTTGGCATGCAGGGGATATCATTTGGCTATCTGGGCCTGTTTGGCAGAGCTTCAGAGCATCCTGGCTATAAAATTGTTAGAGGTCAAGCTAGCGGTAGACTGGGGTGTTGGTGCGCCATCCTGTTTACATTTCAGCATAGACCAATTTATTTTAGCCTAAGAACTCCATATTTACAAAAATACAAGAGTTGGAGCTCAATCCAGCTCAGCATATTATGCTTCAAAATTCTTGAAGCTGGAACCTAAAAGTAGGTAGACAGGAGTGTTTAGGTGAGTCATCTTCTTTACATTTTGGACTAAAAGTAGGTACTTAAACCACTTTGTTTTAGCCTACAAAACTATATTCTGCAACAACATAGGAGTTGGGAGCTCTCCAGAATAGACCCTTACTAGGCTTCCTCTCATTTCACATTTATTCTAAGTTTCTAACACTTCTCCCCAACTCAATCTCTGTTCCCTTCTGTAGGCATGCCGAAAGTGCCAACCTCTCCCTTGTATCTTACCCCAAATTGGCCGCCATGCCTAGTCTTACCACTCAACTTCATGCAGTACAGTAAGCAACTTGTCGGCAAGCAACATGTAACTGAACAATAGAAAGCACTGTTTACCAAAAGGGCAAACAAAATGTAGAAGAATGATAGTACCTTTTTATTCAATCTATTCAAACAACTGAGAATATTGGCATGCAGCTCAGATGAAATGTTGGAATCGTCAAAGTCCACTATTTTTGTAGAAGCAAATGGTATGTACTCCGACAAAGCTGATTCACTATCAACAGTGTACACCTTGAACAACAAATGCATCAATGCTTATTTCCCAAAGACACATACAGGTAACTAAATTAGGAAGAATGATTATCGTAACTGCAGGGATCACGTAATTAACTGAAAATTACATGGCCTGACCTTGGAATTCATGAGATTCTCAATCTCAGAAATTTGCTTTGAATAATTGTGCGGATTCAAATCTATAGAAGGAACAGTGTGACAGATTAGATGATCAGAGAGCCTGTGCATAAAACATAAGGGATGATCGTTTCGCCCTTACCTTTTGAATAAATGAGCGAAGCAGACATCCCAAATATCCTTGGCAGAGGGTCTGACGCACTAGAATTCAACTGGGGGTGATAAAATTCCTGCAAGCGTCGAATGATTTGTCTAAATTGGTGATACAGATCAGCAGGGGAAGGGAGACATCAAAGATTCTGACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013021