Os12g0477700

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Revision as of 10:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0477700| Description = Hypothetical protein| Version = NM_001073291.1 GI:115488543 GeneID:4352205| Length = 2761 bp| Definition = Oryza sa...")
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Gene Name

Os12g0477700

Description

Hypothetical protein

Version

NM_001073291.1 GI:115488543 GeneID:4352205

Length

2761 bp

Definition

Oryza sativa Japonica Group Os12g0477700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:17560519..17563279

Sequence Coding Region

17561029..17563140

Expression

GEO Profiles:Os12g0477700

Genome Context

<gbrowseImage1> name=NC_008405:17560519..17563279 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:17560519..17563279 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctcaagtgccttcgatatgctgagatacctcaacattttgctaaaaagctgaaagagctgaaatggttgaagacttgtcttggcttcagagctcctcctggaactttcctcgttaatgatgattggaaatgtcttctgaatattgttgatgatgtaccgctgcttgatttgaagttctatggagatgaaattagggtgtacgcaggagagttaaggaaggttagtgtaatcgttggctttatagaggcaagtaaggcaattgcctgtagagtcacgaaactgttatgttcttccttgtttacagaggagaggggagttgccatgctggaatgctacagagaacttagtaccaagcatggaaagttacctgttgatcttgccaattgcatgaagtatgagagatggctgcatacatcacttggattcagagctcctcaggaagcaattatttttggttctgaatgggaacatgtttctaaaatttccaatctacccttcattgatgattattattattctgagtatggccaggggaaaggtatcagcatctacagagatgaactaatggccttgggtgccaaggctgaactaaaacatggagcaccctttgtcatctctggactcaaaattcctcatgatgcttcagctattacaccagaagctgttatatcattgctgaagtgcatcaggagctggaaaatgcttggctcagctttacctgacaatttcatgagctcaatcaacctgaggtgggtgaagacgactgcaggatataggcatcccaagaattgtctcctgtttggtcctgcctgctcttctcttcacagggatgatggccccttcgtagatgaagtgttttatgggcaggagatattgtcatatgagagtgagctgcacacattaggagttattgtggatgctagggctggctgtgcgctgatggcgcagtgcttaaagagttgctctaatggcgatgcaatttccaggatatactcatatttggaggcattacgttggaagcctcgcaatgctaacgataattggatttgggtaccacagggaagtgataatggacagtgggtgagcccagatcgttgtgttctttatgacagaaatagcctctttggctctcagctccatgttttggtaacatggtacgactacaagctacttaggtttttcaaaactgtttttggtgtgaagggtcatccaacgattggcgactactgcaggctctggatcatgtggcagaactccaaatccactccgacaccaaaagattgtgctgctttctttgaatttgttgataagaattggaacacagaaattggcaagtaccttgctggatccatcacaaaagttcctgtctgctcagaagatcggatcttgctacttccgaagcaggatgtgttcattccagatgatctgctgctggaggatttgttcaggatgcaggctgagcaacctttatttgtatggtatccaccagctagcttgtctctcttatctccagcaaaactaaatgagatttatagcactgttggtgtccagaaaatatccaaggttgttacgcgggatgaatctgaggacttgaagctcgatcattcgctaaccatggttcagaaaggaaccgtgatcaaacctggcttgctcaggatcatactagcatttcttgcagatcctgctctcgactttcctgctgaaaagaggcatgaaatggtatcatgcctcaccaatgtggttgtctatgagacagctatgcctctcacagtgagctatcaggtagggctttcttcaggaagaagcttgaacgttaaatctgcacggattttccgctgggaaagggaggaatccagaattttcatgactaggaatttcgggtcggcgtcactggagaatgcggagagggtacagtgtgcagcatattttgctgaggagatatcaaaagggttgttgtttgagagaacagaccaagttcctgctctcgctgagcttatcatggctgggtttctgttggactttgatgttcctgctgttcggtttctgttgaagttcaagaacgtaaggctgcttgaggacgatgaacagttctgcagctaccttgcatag</cdnaseq>

Protein Sequence

<aaseq>MLKCLRYAEIPQHFAKKLKELKWLKTCLGFRAPPGTFLVNDDWK CLLNIVDDVPLLDLKFYGDEIRVYAGELRKVSVIVGFIEASKAIACRVTKLLCSSLFT EERGVAMLECYRELSTKHGKLPVDLANCMKYERWLHTSLGFRAPQEAIIFGSEWEHVS KISNLPFIDDYYYSEYGQGKGISIYRDELMALGAKAELKHGAPFVISGLKIPHDASAI TPEAVISLLKCIRSWKMLGSALPDNFMSSINLRWVKTTAGYRHPKNCLLFGPACSSLH RDDGPFVDEVFYGQEILSYESELHTLGVIVDARAGCALMAQCLKSCSNGDAISRIYSY LEALRWKPRNANDNWIWVPQGSDNGQWVSPDRCVLYDRNSLFGSQLHVLVTWYDYKLL RFFKTVFGVKGHPTIGDYCRLWIMWQNSKSTPTPKDCAAFFEFVDKNWNTEIGKYLAG SITKVPVCSEDRILLLPKQDVFIPDDLLLEDLFRMQAEQPLFVWYPPASLSLLSPAKL NEIYSTVGVQKISKVVTRDESEDLKLDHSLTMVQKGTVIKPGLLRIILAFLADPALDF PAEKRHEMVSCLTNVVVYETAMPLTVSYQVGLSSGRSLNVKSARIFRWEREESRIFMT RNFGSASLENAERVQCAAYFAEEISKGLLFERTDQVPALAELIMAGFLLDFDVPAVRF LLKFKNVRLLEDDEQFCSYLA</aaseq>

Gene Sequence

<dnaseqindica>140..2251#ttatggtgaggacatacttgagtacaaaccagagcttgagctactgggagttcatgttgcctttaaacagaattaccagctgctagttgacaacttcagtctcattagagatcaaattactcctgatgtcaccatactgatgctcaagtgccttcgatatgctgagatacctcaacattttgctaaaaagctgaaagagctgaaatggttgaagacttgtcttggcttcagagctcctcctggaactttcctcgttaatgatgattggaaatgtcttctgaatattgttgatgatgtaccgctgcttgatttgaagttctatggagatgaaattagggtgtacgcaggagagttaaggaaggttagtgtaatcgttggctttatagaggcaagtaaggcaattgcctgtagagtcacgaaactgttatgttcttccttgtttacagaggagaggggagttgccatgctggaatgctacagagaacttagtaccaagcatggaaagttacctgttgatcttgccaattgcatgaagtatgagagatggctgcatacatcacttggattcagagctcctcaggaagcaattatttttggttctgaatgggaacatgtttctaaaatttccaatctacccttcattgatgattattattattctgagtatggccaggggaaaggtatcagcatctacagagatgaactaatggccttgggtgccaaggctgaactaaaacatggagcaccctttgtcatctctggactcaaaattcctcatgatgcttcagctattacaccagaagctgttatatcattgctgaagtgcatcaggagctggaaaatgcttggctcagctttacctgacaatttcatgagctcaatcaacctgaggtgggtgaagacgactgcaggatataggcatcccaagaattgtctcctgtttggtcctgcctgctcttctcttcacagggatgatggccccttcgtagatgaagtgttttatgggcaggagatattgtcatatgagagtgagctgcacacattaggagttattgtggatgctagggctggctgtgcgctgatggcgcagtgcttaaagagttgctctaatggcgatgcaatttccaggatatactcatatttggaggcattacgttggaagcctcgcaatgctaacgataattggatttgggtaccacagggaagtgataatggacagtgggtgagcccagatcgttgtgttctttatgacagaaatagcctctttggctctcagctccatgttttggtaacatggtacgactacaagctacttaggtttttcaaaactgtttttggtgtgaagggtcatccaacgattggcgactactgcaggctctggatcatgtggcagaactccaaatccactccgacaccaaaagattgtgctgctttctttgaatttgttgataagaattggaacacagaaattggcaagtaccttgctggatccatcacaaaagttcctgtctgctcagaagatcggatcttgctacttccgaagcaggatgtgttcattccagatgatctgctgctggaggatttgttcaggatgcaggctgagcaacctttatttgtatggtatccaccagctagcttgtctctcttatctccagcaaaactaaatgagatttatagcactgttggtgtccagaaaatatccaaggttgttacgcgggatgaatctgaggacttgaagctcgatcattcgctaaccatggttcagaaaggaaccgtgatcaaacctggcttgctcaggatcatactagcatttcttgcagatcctgctctcgactttcctgctgaaaagaggcatgaaatggtatcatgcctcaccaatgtggttgtctatgagacagctatgcctctcacagtgagctatcaggtagggctttcttcaggaagaagcttgaacgttaaatctgcacggattttccgctgggaaagggaggaatccagaattttcatgactaggaatttcgggtcggcgtcactggagaatgcggagagggtacagtgtgcagcatattttgctgaggagatatcaaaagggttgttgtttgagagaacagaccaagttcctgctctcgctgagcttatcatggctgggtttctgttggactttgatgttcctgctgttcggtttctgttgaagttcaagaacgtaaggctgcttgaggacgatgaacagttctgcagctaccttgcatagtaacaaatcatgtaatgctcctgcatatatgctctttcgctctctctctctgtggactgtgggtaacatactaacaatccttgctaacttttcatctcatgcaggttaaatgttactccatttggatactgcaactctgcgagtcactaattcccccctgtttatctgcatcaaagtttatttttttatgtgcaaagccgcactggtactgatttactgctcttaattcctaattcatgcagcttatgtccattttcttgtaacctatgatttctcactgcttgtgttctgactaactataggacttctggaccactacatgtgtactcgtatggagaatggtggtttatcatcgtggcatagcaaacttttttgttcttgggagacagagtatgaggccgcaggattgagcgatgcaaattattgcgtagtcatgttcaagagtttgttgtttcgttatgctatctctattattaatgctaattatcaactatggcatgaatgcttccg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0477700, RefSeq:Os12g0477700