BGIOSGA013030

From RiceWiki
Revision as of 09:56, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013030| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013030, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA013030

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013030, complete gene.

LocusTag

OSJNBA0010D22.29

Ensembl Transcript ID

BGIOSGA013030-TA

Ensembl Protein ID

BGIOSGA013030-PA

Length

1425

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:24583045..24584469

Sequence Coding Region

24583045..24583347,24583407..24583484,24583795..24583979,24584079..24584469

Genome Context

<gbrowseImage1> name=IndicaChromosome03:24583045..24584469 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:24583045..24584469 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCTGCGGCGCCGAGTTCGGTGGTAGCCGGACTCGTGTCCGGGCTAGGGCTGGCGCGCTCCTCGTTAACGCCCAGCGACGGCCGCTCTCCTTCCCTCTCGCCCCTGCATCCGCCATGGCCCGCGGACCCGCGGCTCGTCTGTAGGAGCAGCGGAGCCCGGCCCCCCAGGGAGAGAGCCGTGGCCGCCGCCGCCGCCGCCGCAAATTCTCCGCGGCAGCAGCAGCAGCTAGGAGAGCATGAGCATGAGGAGGCTGTGGCAGCGGCGGCCATGGAGCCGGAGAGGAGCAGTCCCCATGAGGTGAGGGAGGAGATAGCGAGGTGCTTCGATCTCGTGCGCCGCCTCGGCCGTGGCGCCGTCTACCTCGGCTCCTCCAGGATAGCTAGGCTGCTGGACTGCACCACATGGTCCGGAGCTGGTCCAGGTTTCATGGATGCTGCCACCCAAGGCGCTCTTGAGGCGGGCAAACCGGTCGGTGGCTTCAAGATTGGCAAGGAGGCGGGTGAATGGACAACCTCCAATTTTCATCCTTACCTGCCATCAGAGTCATATCTCACCTGCAGGTTCTTCTCTGCAAGGAAGCATGGGTTAGTTGATGCCGCGGTGCGGAACTGCCCTACCGATAGAACTGCCATCATTGCATTACCTGGTGGGATAGGGACGCTGGATGAGCTTTTCGAGATGATGGCGCTAATTCAACTGGAGCGGATCGGTTCCACGCTTCCAGTCCCATTCTTGCTCCTCAATTATGATTCTTACTACTCCAAACTATTGGACTTTCTGAATGACTGCGAGGAGTGGGGAACCGTTGCTCCGGGAGAAGTAGCATCTCTTTGGAAGGTTTGCAATGGGAATCATGAAGCTTTGGAGTACCTGGCACAGTTCTACAATGTACCTCTTGCTGAAAGAAATTACTGCATATCACCACAGTTGAAGCAGCAGGCAACTTCATAG</cdnaseq>

Protein Sequence

<aaseq>MAAAAPSSVVAGLVSGLGLARSSLTPSDGRSPSLSPLHPPWPADPRLVCRSSGARPPRERAVAAAAAAANSPRQQQQLGEHEHEEAVAAAAMEPERSSPHEVREEIARCFDLVRRLGRGAVYLGSSRIARLLDCTTWSGAGPGFMDAATQGALEAGKPVGGFKIGKEAGEWTTSNFHPYLPSESYLTCRFFSARKHGLVDAAVRNCPTDRTAIIALPGGIGTLDELFEMMALIQLERIGSTLPVPFLLLNYDSYYSKLLDFLNDCEEWGTVAPGEVASLWKVCNGNHEALEYLAQFYNVPLAERNYCISPQLKQQATS</aaseq>

Gene Sequence

<dnaseqindica>1..303#363..440#751..935#1035..1425#ATGGCGGCTGCGGCGCCGAGTTCGGTGGTAGCCGGACTCGTGTCCGGGCTAGGGCTGGCGCGCTCCTCGTTAACGCCCAGCGACGGCCGCTCTCCTTCCCTCTCGCCCCTGCATCCGCCATGGCCCGCGGACCCGCGGCTCGTCTGTAGGAGCAGCGGAGCCCGGCCCCCCAGGGAGAGAGCCGTGGCCGCCGCCGCCGCCGCCGCAAATTCTCCGCGGCAGCAGCAGCAGCTAGGAGAGCATGAGCATGAGGAGGCTGTGGCAGCGGCGGCCATGGAGCCGGAGAGGAGCAGTCCCCATGAGGTCACCGTCCTTTCTTTCTCCTTGGTTTGGCGATTGATTGATTGGTTGGTCCCGTGCAGGTGAGGGAGGAGATAGCGAGGTGCTTCGATCTCGTGCGCCGCCTCGGCCGTGGCGCCGTCTACCTCGGCTCCTCCAGGGTGCCGCCCACCCATCCCCATTACCTCCATGCCGCCGAGCTCTCAAGGGAGGCAAGCACTTTGCTAGCTGTTCCTCTTCCTTTACTGTCTCTTGCAAGTTACACCACCCTAATCTTTTCAGCTCACACATTAAGCTTGTGTTACATCTTATCTTATTCATGCATATTTTCACGGCCTTTTCGCCAGAAACACACTAATGTAAATTGGTCAACAAACTGGTAGATAAACATCACGCTGCACTAGATTTCGTGCGATTGCTATGACCATCTGTATGTCTAAGTGATGCTGAACTTTCATCACATTACAACAGATAGCTAGGCTGCTGGACTGCACCACATGGTCCGGAGCTGGTCCAGGTTTCATGGATGCTGCCACCCAAGGCGCTCTTGAGGCGGGCAAACCGGTCGGTGGCTTCAAGATTGGCAAGGAGGCGGGTGAATGGACAACCTCCAATTTTCATCCTTACCTGCCATCAGAGTCATATCTCACCTGCAGGTAGCTGGATCGCGGTCGCTTAACTTCAGATTGATTTGAGTGTGTGTCATCGATGCATCATGCATGGGAATCAATTTGGGCTATTCTCCTGGATTTCAGGTTCTTCTCTGCAAGGAAGCATGGGTTAGTTGATGCCGCGGTGCGGAACTGCCCTACCGATAGAACTGCCATCATTGCATTACCTGGTGGGATAGGGACGCTGGATGAGCTTTTCGAGATGATGGCGCTAATTCAACTGGAGCGGATCGGTTCCACGCTTCCAGTCCCATTCTTGCTCCTCAATTATGATTCTTACTACTCCAAACTATTGGACTTTCTGAATGACTGCGAGGAGTGGGGAACCGTTGCTCCGGGAGAAGTAGCATCTCTTTGGAAGGTTTGCAATGGGAATCATGAAGCTTTGGAGTACCTGGCACAGTTCTACAATGTACCTCTTGCTGAAAGAAATTACTGCATATCACCACAGTTGAAGCAGCAGGCAACTTCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013030