BGIOSGA013038

From RiceWiki
Revision as of 09:56, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013038| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013038, complete gene.| tag = OSJNBB0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA013038

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013038, complete gene.

LocusTag

OSJNBB0085A04.10

Ensembl Transcript ID

BGIOSGA013038-TA

Ensembl Protein ID

BGIOSGA013038-PA

Length

2814

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:24710950..24713763

Sequence Coding Region

24710950..24712165,24712565..24712737,24713215..24713763

Genome Context

<gbrowseImage1> name=IndicaChromosome03:24710950..24713763 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:24710950..24713763 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGGAGCTGGAGGCGGCCATCGAGGCGCTCGCCGCCAAGAAGCTGCGCCTCCGCGAGGCCTTCGACTGCCTCGTCGCCTGCTCCCCCATCCCCATCCCCTTCCGCTGGGACGACATCGACGCCCACGTCTCGTCCATCCAGTCCTCCATCGCCGGCCGCTTCCGCCAGTTCCAGGCGCTCCAGACCGCCGCCACCGCTGGAATAACGGCGGCCCCGGACACCAGCAACGCCAGCAGCCGCGTCGAGCGTTCGGTCGAACACCTTGTGGTGGTGGTGGAGGGCCAAGAGTCCCACGTCGCGCGCCATGAGGACGGTGGAAACGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGGGCTAGGCAAGGAGGTGGCTATGGACGTAGAATCCGAGGAGGAGAACGGCATGGTGGTGGAGGTGGCAAGCGAGGCGCCTCGCGGAGAAGACGGTGAGGTGAAGGAGGAGGACGAGAAGATGGGGGGGCCAATCAATGCGTCTCCTCCTAGCGAAGAAATCCATGGGAAGGGCGCGGACATGTCGAGAAGATGGGGGAATCCCATGGAAATGTCGGCCGACGTGGACGATGCGAAGACCAAGACGACGGCGACGGCGGCGGCGGCGGAACTGACGGCGATGGCGATCTCTCCGATTCCGGGATTCACAGGCAGAGGGGGCGCGGAGGCGTCGCTGAGGCGGTCTCTCGCGGCGGCGTGCGCGAGCATGGACTCGTCGAGCCTGGCACGCATCCTGTGCTCGTCCGGCAGCAGCAGCAGCAGCCACGCCACCCTCGCCGCACGTCACTTCCGCCCGGCGCTTCTCGCCGCCGCCGAACCCGCGGCGCTCGTCGTCCGCGCCGTCAGGGACCTGCTGGCCGGGACGGCGCCCATCAGGGACAGCGCGTGGGAGAGCTGCGTGGAGCTGCTCAGCTGCGTGCCCAAGCTCGCCGTGGCGCCGTCGCCGGGCACGATGGAGCAGGCCAATCGCTTGGCCGAGGACTGGAAGGAGATGATCGGGAGGACCGAAAGTTGCAGCATGAACCTCGGCCGGTTGGCTGTATGGGGCCTTCTCAACTTTCTTGTCTCCTACAACATTGTCCTGGAGTTCGACGCGGAAGAAATCATCCATTTCTTTGGCACTCTCCCGGACGACAAGAAGCAGTGTTGCATCTCCCTCTGCAAGTATCTTGGACTGATTGATAAGATGGCTGATTCAGTTGGTCATTTGATTGAACATGGACAACAACTTGTCGCTATCAGATTGGCATGCACTTTGAATTTGACAGACAAATACACTCCACTTTCCATCATGGAAGACTATATTCAGAATGCTAAGGAGACTGCTCAAGAGATACTGAGCATGGAAAGTGATTCAGAGTCACTGAAACTGTCCATGTCAAAGCAGGTCAATGCTCTAATATTGTCATGGAGGGTTGTTGGTGAATGCAATATTGACTCTGTCCATTGTGATAGAATTAAGGCAGAAATTACCCAGCTGTTGCATAAATATGCAAACAAGAGGCACAGCCTAGAAGAACTTCCTTCTGATACTTCTAGTCCACATCAGAAACATCACCAAATGTCGCAAGAGCAGCACCACTGGCAGCAAAAGCATCGAGAGGAACAACAGCAGCAGTTTCAAAATCAATCCAAGGAACAAGAACAAGAGAGAAGGATGCAAAAGTTACGAGAGCTGAGGAAAAAGAAAAACAAGAGAACTCAGCGCAGGAAGCGGAAGCAAAATGCACAAGTGATGAAGCAGCATCAATTTGAGAAACAGCGAAAACTATATCACGCTGGTTCATTTACCAATTCTCAAAGCTATGTCAGATCAGAAATTCACCACCACCTCAGCCAGCATTTTTCAGGAACTATAGGAACACCTGTTGCACCATATACACCTGTTGCACCATATACCGGACCTTTTTGGTAG</cdnaseq>

Protein Sequence

<aaseq>MGELEAAIEALAAKKLRLREAFDCLVACSPIPIPFRWDDIDAHVSSIQSSIAGRFRQFQALQTAATAGITAAPDTSNASSRVERSVEHLVVVVEGQESHVARHEDGGNGEGEGEGEGEGEGGLGKEVAMDVESEEENGMVVEVASEAPRGEDGEVKEEDEKMGGPINASPPSEEIHGKGADMSRRWGNPMEMSADVDDAKTKTTATAAAAELTAMAISPIPGFTGRGGAEASLRRSLAAACASMDSSSLARILCSSGSSSSSHATLAARHFRPALLAAAEPAALVVRAVRDLLAGTAPIRDSAWESCVELLSCVPKLAVAPSPGTMEQANRLAEDWKEMIGRTESCSMNLGRLAVWGLLNFLVSYNIVLEFDAEEIIHFFGTLPDDKKQCCISLCKYLGLIDKMADSVGHLIEHGQQLVAIRLACTLNLTDKYTPLSIMEDYIQNAKETAQEILSMESDSESLKLSMSKQVNALILSWRVVGECNIDSVHCDRIKAEITQLLHKYANKRHSLEELPSDTSSPHQKHHQMSQEQHHWQQKHREEQQQQFQNQSKEQEQERRMQKLRELRKKKNKRTQRRKRKQNAQVMKQHQFEKQRKLYHAGSFTNSQSYVRSEIHHHLSQHFSGTIGTPVAPYTPVAPYTGPFW</aaseq>

Gene Sequence

<dnaseqindica>1..1216#1616..1788#2266..2814#ATGGGGGAGCTGGAGGCGGCCATCGAGGCGCTCGCCGCCAAGAAGCTGCGCCTCCGCGAGGCCTTCGACTGCCTCGTCGCCTGCTCCCCCATCCCCATCCCCTTCCGCTGGGACGACATCGACGCCCACGTCTCGTCCATCCAGTCCTCCATCGCCGGCCGCTTCCGCCAGTTCCAGGCGCTCCAGACCGCCGCCACCGCTGGAATAACGGCGGCCCCGGACACCAGCAACGCCAGCAGCCGCGTCGAGCGTTCGGTCGAACACCTTGTGGTGGTGGTGGAGGGCCAAGAGTCCCACGTCGCGCGCCATGAGGACGGTGGAAACGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGGGCTAGGCAAGGAGGTGGCTATGGACGTAGAATCCGAGGAGGAGAACGGCATGGTGGTGGAGGTGGCAAGCGAGGCGCCTCGCGGAGAAGACGGTGAGGTGAAGGAGGAGGACGAGAAGATGGGGGGGCCAATCAATGCGTCTCCTCCTAGCGAAGAAATCCATGGGAAGGGCGCGGACATGTCGAGAAGATGGGGGAATCCCATGGAAATGTCGGCCGACGTGGACGATGCGAAGACCAAGACGACGGCGACGGCGGCGGCGGCGGAACTGACGGCGATGGCGATCTCTCCGATTCCGGGATTCACAGGCAGAGGGGGCGCGGAGGCGTCGCTGAGGCGGTCTCTCGCGGCGGCGTGCGCGAGCATGGACTCGTCGAGCCTGGCACGCATCCTGTGCTCGTCCGGCAGCAGCAGCAGCAGCCACGCCACCCTCGCCGCACGTCACTTCCGCCCGGCGCTTCTCGCCGCCGCCGAACCCGCGGCGCTCGTCGTCCGCGCCGTCAGGGACCTGCTGGCCGGGACGGCGCCCATCAGGGACAGCGCGTGGGAGAGCTGCGTGGAGCTGCTCAGCTGCGTGCCCAAGCTCGCCGTGGCGCCGTCGCCGGGCACGATGGAGCAGGCCAATCGCTTGGCCGAGGACTGGAAGGAGATGATCGGGAGGACCGAAAGTTGCAGCATGAACCTCGGCCGGTTGGCTGTATGGGGCCTTCTCAACTTTCTTGTCTCCTACAACATTGTCCTGGAGTTCGACGCGGAAGAAATCATCCATTTCTTTGGCACTCTCCCGGACGACAAGAAGCAGTGTTGCATCTCCCTCTGCAAGTATCTTGGACTGATTGATAAGATGGCTGGTACAGTTTCAATGCCTCTTACTCATACTCATTGCTCAACTATAATTTCATATGTTTGTAGGCAACTTATGCTACACATCTAGCGCAATTGTCGCGGATATGGAAATTCATTGATTTGTGCTTGTGTTCACATTCTTTAATGATAAGCTTGTTTAACTCCATGTCCCAAGCCTTCTTATGTTATATTTAGTGGCCATTAATTTGTTTATCATCTAACTGAATCAGTAGAAATTATGTTTTACACTTTTAGTCACAGTTAATACAGAGCATTAATTTGCATCCTAAAATGGTGACCTCAACATTATATTTGCATTTGCTAGTAAAAAAGTTATCTCATGAACATTTTCTATATCCAAAAAGGGTTCCATGTGGACTTATGATTATCTCTCATTATTTCAGATTCAGTTGGTCATTTGATTGAACATGGACAACAACTTGTCGCTATCAGATTGGCATGCACTTTGAATTTGACAGACAAATACACTCCACTTTCCATCATGGAAGACTATATTCAGAATGCTAAGGAGACTGCTCAAGAGATACTGAGCATGGAAAGTGATTCAGAGTCACTGGTATGTCCCTTTTTATGCAGTAGCTATCTCATTTATATTTTCTACTCGTTTTTCTATCCAAAATTTCAAATCCGTGTGAATATGAATGGAAGAATAGTTCATTCATGTGCTCTAGAGCATGTAGCTCTTCACGTTGCAGAGTTAGAAAAAAAAAACTATATTCCTTTTTCTAATGTAACCCTCTTATGATTTAAAGGTAAACAACTGGTGTTTCCGGCTTTGTAAAAACTGTACTGCACAACATTCTGAAGCACGTAATTAGGATGTTTTCAATGTAATGATTTATTTAGGATGTAGTGGAGTAGTGAGTAATTTCAAATTATATATTCATATTGCTTTTAGAAAATATCATATTCAATTTGTGAAAAATCACTGCAGATCATTTGGCATGGTAAATGATTGCTTCCACATACTGATATACAAATATGCTTATTTTAAAATTGGTTTAACACACCTGATGCATCTTGTATTGAGCAGAAACTGTCCATGTCAAAGCAGGTCAATGCTCTAATATTGTCATGGAGGGTTGTTGGTGAATGCAATATTGACTCTGTCCATTGTGATAGAATTAAGGCAGAAATTACCCAGCTGTTGCATAAATATGCAAACAAGAGGCACAGCCTAGAAGAACTTCCTTCTGATACTTCTAGTCCACATCAGAAACATCACCAAATGTCGCAAGAGCAGCACCACTGGCAGCAAAAGCATCGAGAGGAACAACAGCAGCAGTTTCAAAATCAATCCAAGGAACAAGAACAAGAGAGAAGGATGCAAAAGTTACGAGAGCTGAGGAAAAAGAAAAACAAGAGAACTCAGCGCAGGAAGCGGAAGCAAAATGCACAAGTGATGAAGCAGCATCAATTTGAGAAACAGCGAAAACTATATCACGCTGGTTCATTTACCAATTCTCAAAGCTATGTCAGATCAGAAATTCACCACCACCTCAGCCAGCATTTTTCAGGAACTATAGGAACACCTGTTGCACCATATACACCTGTTGCACCATATACCGGACCTTTTTGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013038