Os12g0479100

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Revision as of 10:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0479100| Description = Conserved hypothetical protein| Version = NM_001073295.2 GI:297613169 GeneID:4352209| Length = 2143 bp| Definition ...")
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Gene Name

Os12g0479100

Description

Conserved hypothetical protein

Version

NM_001073295.2 GI:297613169 GeneID:4352209

Length

2143 bp

Definition

Oryza sativa Japonica Group Os12g0479100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:17682037..17684179

Sequence Coding Region

17682037..17682087,17683154..17683226,17683562..17683612,17683710..17684179

Expression

GEO Profiles:Os12g0479100

Genome Context

<gbrowseImage1> name=NC_008405:17682037..17684179 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:17682037..17684179 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcacaggacccctcgcacccccaccgccagagcaaggacaccgccgccgcccctccgccgccgccgccgcaggagcagccgcagcagcagcaacccgagctaatcacggcgccgccgcctcgcgacgacgtcgcccaccaggagcccagcacaagtagcagcagcggtggcggcggcaccgacgccgccggcctgtcgctgcagctcgggctcggcccgtcggcgccgggctcgccgtcgtcgtctcgccggaaacggccaagaaccgacgcccaccatgaggcggccgcaggcccatcaacgtcggcggccgatccgcagctaccggagctgcggctgtcggtgctccacccaggcccagggccttcgtcgtcggcgtcggcggtgggggcggtggtggcggcggcgccgccgccgccggcgcacgaggccggcacgtggttcgtgctccgggcggcgcagaaccagaggagggagccgccattgccgcagattccccggagtttcttgagggttagagatgggaggatgacagttagagtagtgatgaggtacctggttaacaagctgagtcttgaggatgattcacaggtgaagggtgtccgtccaagtgttacatcatgggtgaccccccatgattaa</cdnaseq>

Protein Sequence

<aaseq>MAQDPSHPHRQSKDTAAAPPPPPPQEQPQQQQPELITAPPPRDD VAHQEPSTSSSSGGGGTDAAGLSLQLGLGPSAPGSPSSSRRKRPRTDAHHEAAAGPST SAADPQLPELRLSVLHPGPGPSSSASAVGAVVAAAPPPPAHEAGTWFVLRAAQNQRRE PPLPQIPRSFLRVRDGRMTVRVVMRYLVNKLSLEDDSQVKGVRPSVTSWVTPHD</aaseq>

Gene Sequence

<dnaseqindica>2093..2143#954..1026#568..618#1..470#atggcacaggacccctcgcacccccaccgccagagcaaggacaccgccgccgcccctccgccgccgccgccgcaggagcagccgcagcagcagcaacccgagctaatcacggcgccgccgcctcgcgacgacgtcgcccaccaggagcccagcacaagtagcagcagcggtggcggcggcaccgacgccgccggcctgtcgctgcagctcgggctcggcccgtcggcgccgggctcgccgtcgtcgtctcgccggaaacggccaagaaccgacgcccaccatgaggcggccgcaggcccatcaacgtcggcggccgatccgcagctaccggagctgcggctgtcggtgctccacccaggcccagggccttcgtcgtcggcgtcggcggtgggggcggtggtggcggcggcgccgccgccgccggcgcacgaggccggcacgtggttcgtgctccgggcggcgcagaaccagtgagtacaccatggccgacgacgatgatcttcatgaatggtttagagacaatgtgggtggttagttcatgcggttgccgttgatccatgtttgcaggaggagggagccgccattgccgcagattccccggagtttcttgagggttaggttagtaatttttctcatgcatctctacttctctagtagctactacctccatcccaaaatataacaacttttggctgtccggattgatagctaaaaatgcttatattttgagacggagggagcagtagaaaagctaatgatcttcttgttaatttgttgatcaacttcttgggtaattaaattagttttaattgattgattttatagtttttggtcttgttggtgatggatatttgtatatgtttttgatgatgccacattgacttggggggtgtttgtgtgtgcatgcatgtgtgcgcacatgttgtgtgtgcatggtgtggccaaattaacagagatgggaggatgacagttagagtagtgatgaggtacctggttaacaagctgagtcttgaggatgattcacaggtatgtcatgcatacctagctccttgcttattttattttattttatttttgcactcctttgccttgtctttatgtttttttttcatgtttgttttctttgaatgagtgtggaacaatgtccgttggtttactgtttttgattcgtcgcggttttgagagtttcttaactagagttattagctttgttagtttagtagtccccactgtgggtcatggcctcatgggggcctcatggctcttggtagaaacaaacaattttaaccactgagctataaaaaggattaacaagattctaagaaaatattaacacatataaattaagtttttcagttgctacagctatatgcaaaagtatatatgcaatatacaaaaatttcgtggtatcgatcgggcccgacacggctaaaataatatgcatcatcatgttcttgtgagagactgtcgctgccaagttccataatggaagtacattaatttggtttttgtgtgggggaaatacattattttgttttgtggggagaagcacatcaatttgttttgcggtgagaaatacattatatacacataatattaaatattatcccctgtatatatatacataaatatatcttcctggtatcagcatatacagatagatacagtaatttttttagaaaaaaaaacaagaggaaaagtagtgcaacaatattaactcaactgagaaaagtgcatggactagagagaacaagtttctaggacaagtggcatccacaaataagggcaggccagaagggtggttttgctacttgtactaacctattgtcaacagccacttaattacactgcatgcctagagctagctaatctatagttatagtgcatgcatctggaaaatttcgtggcgtgttttatattaattaattaccttggagcttgttgctagcttaagtagatgatcaattataatcgctgcagagagagcgcaaaaatattggtaggtgaaaggagctttagagctacggacagtagtttggatgtcgggattccaataggtctttgttgttgttgttgtgacaaattggtgtaggtgaagggtgtccgtccaagtgttacatcatgggtgaccccccatgattaa</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0479100, RefSeq:Os12g0479100