BGIOSGA013079

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Revision as of 09:56, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013079| Description = BGIOSGA013079| Definition = Oryza sativa Indica Group BGIOSGA013079, complete gene.| tag = | tid = BGIOSGA013079-TA|...")
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Gene Name

BGIOSGA013079

Description

BGIOSGA013079

Definition

Oryza sativa Indica Group BGIOSGA013079, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA013079-TA

Ensembl Protein ID

BGIOSGA013079-PA

Length

1812

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:25796218..25798029

Sequence Coding Region

25796218..25798029

Genome Context

<gbrowseImage1> name=IndicaChromosome03:25796218..25798029 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:25796218..25798029 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGGCACAGCAGCGCCTGGGTGCTGGTGGACGGTCCGCCACCACCAAGACCTCCGGCGCCGCCACCACCGGCTCCGTGTCGTCAAGGCGGAGGGCGCGGCGAGCGGCGACTGTTGCACGCCATTCGGCTGCCACTCCCTCGTCGGCACCTCCGACTCGGGAGGATCAGTATGGAGAGCCGGATGCCCGCCTCGACATCGAGCGCCGGCGTAATAGCCGGCGTACTCCCCGCGCAACGGAGGGCGCCTCTTCGTCCAGAGTGTCACCTCGACATGGACGTGAGGACCAGCCCTCCGTGCCCCCGGCTGGTGGTGTCGGCTGTAGAGCCTTTGTGGCGAGTCTTCGGAATGTCCGTTGGCCCCCAAGGTTCCGGCCCACCATCACCGAGAAGTATGATGGGAGTGTCAACCCCACCGAGTTTCTCCAGGTCTATACGACCGGGATTGAGGCCGCTGGGGGTGACGACAGGGTCATGGCGAATTTCTTTCCCATGGCCCTGAAGGGACAGGCGCGGGGTTGGCTAATGAACCTGCCACCCGCGTCGGTCCACTCCTGGGAGGATTTGTGCCAACAGTTCACCATGAACTTTCAAGGCACTTATCCGCGCCCAGGTGAAGAAGCGGACTTGCACGCGGTACAGCGAGGGGATGATGAGTCACTTCGCTCGTACATTCAGCGGTTTTGCCAAGTCCGCAATACCATACCATGCATCCCTGCACACGCGGTGATCTACGCGTTCAGGGGGGGTGTGCGGCACAACCGCATGCTCGAAAAGATCGCTTCCAAAGAGCCCCAGACTACCACGGAGCTTTTTCAGCTCGCGGACCGAGTGGCTCGTAAGGAGGAAGCGTGGACCTGGAACTCCTCCGGTTCCGGTGTGGCAGCTTCGGCCGCCCCCGGGTCCGCCGCTCAGACAGGGCGGCGTGACAGGAGGAGGAAGAAGAGGTCGGTCCATTCCGGCGACGAGGGTCATGTCCTCGCCGTCGAGGGCGCTCCGCGGGCCACCCTAAAGGGGAGGCCTGCGAGCGACAAAAAGAAAGAGGCTGGTGCTCCCAGCAGGGAGCGCCCAGCCGGCAAGTGGTGCTCCGTCCACAACACTTCCCTCCATGATCTCGCGGACTGCCGCGCAGTCAAAAGCTTGGCTGAGCGGACGAGGAAGTGGGAGGAGGACAGGAGGCGGGAACAACGTGAGGGCAAGTCCCCGGCGGTTCCTTCCGGCAATCGGCGAAGAGAGGCCAAGCAGAAGGCCCCCGCCGAGGACATCGATGATGGCGATGATGACCTAGGTTTTCAAGAGCCTGGGGCCACCATTTCCACCGTCGATGGGGGAGCGTGTGCTCACGTTTCTCGCCGGAGTTTCAAGGCTATGAAGCGAGAGCTTCTGGCCGCGGCCCCTACTCATGAGGCGACGCGTCGGGCGCGGTGGTCGGAGGTTGCCCTCACCTTTGACCAGACCGACCACCCACCGTGCGTTGCCCGGGGAGGGCAGATTGCGATGGTGGTTTCCCCCACCATCTGCAACGTGAAGTTGGGGCGTGTCCTCATAGATGGAGGAGCGGCCCTCAACATCCTTTCCCCCGCGGCTTTTGATGCCATCAAGGCCCCGGGGATGGTGCTCCAGCCGTCCCAACCGATCATCGGTGTGACGCCGGGGCACACATGGCCGTTAGGTCACATCGACCTGCCGGTCACCTTCGGTGGATCCGCCACTTTCCGCACGGAGCGGGTGAACTTCGATGTGGCGGACCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCAAGATGA</cdnaseq>

Protein Sequence

<aaseq>MTAQQRLGAGGRSATTKTSGAATTGSVSSRRRARRAATVARHSAATPSSAPPTREDQYGEPDARLDIERRRNSRRTPRATEGASSSRVSPRHGREDQPSVPPAGGVGCRAFVASLRNVRWPPRFRPTITEKYDGSVNPTEFLQVYTTGIEAAGGDDRVMANFFPMALKGQARGWLMNLPPASVHSWEDLCQQFTMNFQGTYPRPGEEADLHAVQRGDDESLRSYIQRFCQVRNTIPCIPAHAVIYAFRGGVRHNRMLEKIASKEPQTTTELFQLADRVARKEEAWTWNSSGSGVAASAAPGSAAQTGRRDRRRKKRSVHSGDEGHVLAVEGAPRATLKGRPASDKKKEAGAPSRERPAGKWCSVHNTSLHDLADCRAVKSLAERTRKWEEDRRREQREGKSPAVPSGNRRREAKQKAPAEDIDDGDDDLGFQEPGATISTVDGGACAHVSRRSFKAMKRELLAAAPTHEATRRARWSEVALTFDQTDHPPCVARGGQIAMVVSPTICNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLQPSQPIIGVTPGHTWPLGHIDLPVTFGGSATFRTERVNFDVADLXXXXXXXXXXXXXXXXXAR</aaseq>

Gene Sequence

<dnaseqindica>1..1812#ATGACGGCACAGCAGCGCCTGGGTGCTGGTGGACGGTCCGCCACCACCAAGACCTCCGGCGCCGCCACCACCGGCTCCGTGTCGTCAAGGCGGAGGGCGCGGCGAGCGGCGACTGTTGCACGCCATTCGGCTGCCACTCCCTCGTCGGCACCTCCGACTCGGGAGGATCAGTATGGAGAGCCGGATGCCCGCCTCGACATCGAGCGCCGGCGTAATAGCCGGCGTACTCCCCGCGCAACGGAGGGCGCCTCTTCGTCCAGAGTGTCACCTCGACATGGACGTGAGGACCAGCCCTCCGTGCCCCCGGCTGGTGGTGTCGGCTGTAGAGCCTTTGTGGCGAGTCTTCGGAATGTCCGTTGGCCCCCAAGGTTCCGGCCCACCATCACCGAGAAGTATGATGGGAGTGTCAACCCCACCGAGTTTCTCCAGGTCTATACGACCGGGATTGAGGCCGCTGGGGGTGACGACAGGGTCATGGCGAATTTCTTTCCCATGGCCCTGAAGGGACAGGCGCGGGGTTGGCTAATGAACCTGCCACCCGCGTCGGTCCACTCCTGGGAGGATTTGTGCCAACAGTTCACCATGAACTTTCAAGGCACTTATCCGCGCCCAGGTGAAGAAGCGGACTTGCACGCGGTACAGCGAGGGGATGATGAGTCACTTCGCTCGTACATTCAGCGGTTTTGCCAAGTCCGCAATACCATACCATGCATCCCTGCACACGCGGTGATCTACGCGTTCAGGGGGGGTGTGCGGCACAACCGCATGCTCGAAAAGATCGCTTCCAAAGAGCCCCAGACTACCACGGAGCTTTTTCAGCTCGCGGACCGAGTGGCTCGTAAGGAGGAAGCGTGGACCTGGAACTCCTCCGGTTCCGGTGTGGCAGCTTCGGCCGCCCCCGGGTCCGCCGCTCAGACAGGGCGGCGTGACAGGAGGAGGAAGAAGAGGTCGGTCCATTCCGGCGACGAGGGTCATGTCCTCGCCGTCGAGGGCGCTCCGCGGGCCACCCTAAAGGGGAGGCCTGCGAGCGACAAAAAGAAAGAGGCTGGTGCTCCCAGCAGGGAGCGCCCAGCCGGCAAGTGGTGCTCCGTCCACAACACTTCCCTCCATGATCTCGCGGACTGCCGCGCAGTCAAAAGCTTGGCTGAGCGGACGAGGAAGTGGGAGGAGGACAGGAGGCGGGAACAACGTGAGGGCAAGTCCCCGGCGGTTCCTTCCGGCAATCGGCGAAGAGAGGCCAAGCAGAAGGCCCCCGCCGAGGACATCGATGATGGCGATGATGACCTAGGTTTTCAAGAGCCTGGGGCCACCATTTCCACCGTCGATGGGGGAGCGTGTGCTCACGTTTCTCGCCGGAGTTTCAAGGCTATGAAGCGAGAGCTTCTGGCCGCGGCCCCTACTCATGAGGCGACGCGTCGGGCGCGGTGGTCGGAGGTTGCCCTCACCTTTGACCAGACCGACCACCCACCGTGCGTTGCCCGGGGAGGGCAGATTGCGATGGTGGTTTCCCCCACCATCTGCAACGTGAAGTTGGGGCGTGTCCTCATAGATGGAGGAGCGGCCCTCAACATCCTTTCCCCCGCGGCTTTTGATGCCATCAAGGCCCCGGGGATGGTGCTCCAGCCGTCCCAACCGATCATCGGTGTGACGCCGGGGCACACATGGCCGTTAGGTCACATCGACCTGCCGGTCACCTTCGGTGGATCCGCCACTTTCCGCACGGAGCGGGTGAACTTCGATGTGGCGGACCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCAAGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013079